Hgla014102.2
Basic Information
- Insect
- Hebomoia glaucippe
- Gene Symbol
- -
- Assembly
- GCA_025727935.1
- Location
- JAOSYY010000013.1:6678081-6686058[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0045 0.31 11.8 1.0 3 23 655 676 654 676 0.96 2 23 0.32 22 6.0 0.3 1 22 1049 1070 1049 1070 0.95 3 23 6.3 4.3e+02 1.9 0.3 1 22 1112 1133 1112 1135 0.82 4 23 0.0041 0.28 12.0 0.4 3 21 1146 1164 1144 1165 0.94 5 23 0.98 68 4.5 0.0 3 23 1174 1195 1172 1195 0.89 6 23 0.038 2.7 8.9 0.1 3 23 1215 1236 1213 1236 0.96 7 23 0.025 1.7 9.5 2.3 1 23 1242 1265 1242 1265 0.95 8 23 0.12 8.1 7.4 0.0 1 23 1291 1314 1291 1314 0.90 9 23 0.011 0.73 10.7 3.3 1 23 1319 1341 1319 1341 0.96 10 23 0.12 8.6 7.3 0.1 1 23 1347 1370 1347 1370 0.95 11 23 0.00013 0.0093 16.6 1.6 1 23 1383 1405 1383 1405 0.97 12 23 0.00017 0.011 16.3 1.8 1 23 1454 1477 1454 1477 0.97 13 23 0.0018 0.12 13.1 1.8 1 23 1537 1560 1537 1560 0.96 14 23 0.0016 0.11 13.2 1.4 2 23 1580 1602 1579 1602 0.95 15 23 0.031 2.2 9.2 0.1 2 23 1608 1630 1607 1630 0.95 16 23 0.0064 0.44 11.3 0.2 1 21 1674 1694 1674 1695 0.95 17 23 0.0011 0.08 13.7 0.6 1 23 1705 1727 1705 1727 0.93 18 23 0.00019 0.013 16.1 0.3 2 23 1820 1842 1820 1842 0.93 19 23 1.7e-07 1.2e-05 25.8 1.1 3 23 1849 1869 1848 1869 0.98 20 23 0.005 0.35 11.7 0.0 3 23 1889 1910 1888 1910 0.95 21 23 0.11 7.8 7.4 0.0 1 23 1932 1954 1932 1954 0.97 22 23 0.011 0.77 10.6 0.4 1 23 1960 1983 1960 1983 0.95 23 23 0.00024 0.016 15.8 0.4 1 23 1991 2014 1991 2014 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTACCGATATTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGGCCTTGCATCTAAAATCAAAAATTGCGTGTCCATTCAGATAAACGAAAATGACGAACTGCCAACTAATGTCTGCAGGAAATGTATGGATAATGTCAATAACTGGCACACATTTAAGACAGTTTGTGAAAGGACACAAAACAAATTACAATCTCTGATTAACAAAGAGAGCAGCCATCTAGAAGAGATTCATATTAAGACTGAGCCTAATGAAGGATTATCTGATGGGGGATATGATGATGGTGTGGTTATTGATGGATCATATCCTGAAGTGGAGAATGCTGGGTCCTCTAGTAAACTTCAACCCGAAGGACCACCGATTTTGGCTTCACTGGGACTCACTCCAAGAAGTGACAAGAAAAATATAGATCCTCGAATGGACTGGCAGAGAGTCCATGCTATACTGGGCATTGTAAAAGAGGATGAAGTGATTGACTCACTACAGTCCACTGAGGAATGTGAAGTCTCTTATATGTCAGATCATGATTCAGACGTTGAAAGTGAATTAATTGAAGAAATACCAATAAACTGCAGTGATTTTAAAAATGGTTACATATGCAAGAACAAAGTAATTTTATCTAAAAATCCTAAACTATCACTAGTAGATAATGTAAGAAAAATAAAGGAAGTGTCACAAATGCGAAAAATGAACATTTCGACAGTCAAGTCCTACCCTCAACCGAAAAACGCATGGCAGATGCTAGTCAGTGATGATTTACTGGAACTTATTGTCACATCCACAAATGAAAATATTAACAGAAAGTTCAAAAACAAACCAACTAACATGAATGAAATGAAAAATTTGATTGGCATTCTGTACTATCATGGCATAATGAGGCCAACACATCGAAAATGCATGGACCTCTGGGACAATGACTATGGATCTGTTTGCATCCGGAGAACAATGAAGTATGAGCGATTCAAATTTTTACTTGAAAATATCAATTTTGATACTCCAGATGAAAGCGGTATTATGCAATTGGATGTAATGAAGCGGATACGGAAAGTGTTTGAAATATTTGCAATGAATTGTCGGAACTCTATGGTGATTGGGAATATGGCTGTTGTTGATGACATATTGTTGCCAGTTCACGGACCTTGTCCATTTAGATATGGTATTAAAAAAAGAAACATTAATCAGGGCATTAAATTAGTACTTGTAGTTGATCCTATTAATTTTTACATCAGCAATTTAGATGTTATAACAAATACTTATTTTGGTAGAGATGACATAATTATGAAAGTTGTTCAACACTTAGCCGGTTCAGGAAGGATAATTATTATGGATAGTTGGTTCACATCACTTAATCTAATCGAGAGACTTAAAAAGGAATACAAATTGTTCAGTATTGCTGCATTAAATCCAAATGATGCAAACATTCCACCAGTCTTCCTTTCACAGTATAGAAAATGCAAACCATACATTGGTGCTTTTCTAAATAATGATATAATTATATCGTCTTATGTTGGATCTAACTCCAGAGTCATAAATATTTTGAGTAATGAACCAAGTTATTATAAACGATCAAATGTGAATAATTCTGTGGTATTGCAGTATAAGAAACACAAGTCTGCTGTGGAAGTGTTAGATGTTTTGATGCATTATTACTCAACAATGCAGAATAGTAATGATTGGACTTTATCACTATTTTTTATGTTATTGAATGTTGCATCCGTTAATGCCCAGGGCGTCGAAAGTGAAAAAGATGAGGAGGAAGTGGAAGACGAAGAGATGACTGAGGTGACTGACGAGCAAGTTTACGCAAATCCACCCGTTCCAGAAGTTTCTATCACGGTTATGCGTCCCACCGGTGAAACATTACATGCTCGTCAAGGCATACAGCAATTAGCCTCAAAGGATTGCCTCGTATGCGGTCGGTCGTATAGATATTCCCATAATGCTAGGCGTCACGAACTTACAGCGCATAGTTTTGATAGATACACAAACAAAATAACAAACAAAAAGGGTCATAACCATATGCAACCGAAACTTCGACCTAATCCATTTAATCCTAAAGCTCGTTTAATGCCAAATCCTATCAGTCATAAAATGCAGCTACTTCCAAAGCAGTCTACGTCTATTCAACTTATGCAACAGAAAATCAACCCACCGAAACCCATTCCTATACGAAATCTTAAATCTACACAAAACAGTTTACCATATCCTTTACGTATAAAAGCCTTAAAAGATTTGCAAATCAAAAAGAAAGAACCGCAAATATTAAAAACGCTCTTAACAACTAAACCTGAAATATTAGTATCCGAGCCCGAAATTATTAACTCTGGTCCGGAAAGTCCGGAAACTTTGATATCAGAACCTGAAATAGCTTCTTTTCAAGTTGAAACGATTTTGTCGGAACCCGATGGTTTTGTAAATGACGCTGAAAAAGATGAAGATATACAAAATCATAACCAACATTATGATACAGTTGACATGGATTCAGAAAATGAAATCGAAATTGCGCGGCAACGTGAAAACGAGGGTGAATCAGAAGTTCAAGCTGAAAATGAAGGGCAAGAGAATGACGAAGAAAACATCGCCGATGCAGAACATAATGATTTAGATAAAGAACATAATGAAGAAATTAATGAAAATCAAGACAATGTTCTCGATGAACAGCAAGAGGAAGTTGATGAAGAAGCAAAGGAATCTGAAGAAGGCGCAGAGAAGGAAGACGATGACCACGATGAGAGTCAAGAAAACGAGGATTATGATCCAGATCTTCCACCTGTAGAAATTACCCCCGTTGTCGAAATTAATGAGGATATGCAAACAAACTCTTTTGTGAGTGAGATAAATGAGGAAGAAGAACTCGAACTTGACTACACTGCAGACCCAAATGATATAATCGACGGTGACGATACGAAAGAACTAGATCCAGATAAACAGTACGTCACAAAAACCCAAAGAGATTTCATACAAAAATATCGTGATATTATTGAGCAGATCAATACGAAGAGATGTCTATGCTGTAATAGAGAGCACCCGCGTAGAAAAGCCGTCATACAACATTTACAGAAAAATGGGCATAAAGTGCCTAAACATACATGTTACAATTGTGTTGTCACTTTTGGTCATATTGGAGCTTTACTCAGTCACATGAGGTCTAACACTTGTACTGATCTATGGAAAATTATATACAACGAAAGCGGTATAACAGAAGACCAAGTCCTCGAAGATGAACCAAAGGATCCAAAAGTACAATATAAAGACATTTTTAATGCAAGATCCTACGCTTGTAAACTGTGCCCTGCGAAGTTCCAGTTGAAACAATTTATAATGAAACACGTGTTGGATGTTCATGAGGATGGCCAATCTAGGGTCCACCTGGCTTGCGTACATTGCGGATCACGATTCAAAGATAAAGCTCTATGGAAGAAACATATACGGAACGGTGAATGTACCGTTTATATCGCGTGTGATTTGTGTCCGGAGAAATTCGGTAATATGCAAGATTTCAATGAGCACGCTCTAGCCGTTCATGCTGGTAGTTTCGACCCTGATAATCAGAATAAGTGTGTCGACGGTCGTCCTACCGATTGTCCTATTTGCGGCAAAAAGAACAGCGGCTACCCGAATTTAGTTAAACATTTGAAGATAATCCATAACGAGGAAAAGCCACATTATTGCCAACATTGCGAATCTAAGTACGAACAAGCCGCCGATCTTAACAAGCACATTTATATGGAGCATTCGGATAAAGTCTTGGGGGTGCAGTCTTCTGAACCAGATATGTCGCTCGTGAAAGAGGAAGCTGAAGAATATCATTATTCTTGTACCGAATGCAATGCCATATTTGAGACGGTCGACGCATGGACTGATCATCAAGTTGCTGAACATAATCAAGTTGCCCATCATTGCGATCAATGTGATAAGAAATTCTTACGCCCGTCTGAACTGGCAGAGCATAAAAATAGCCATTTACGTGTTAAATTCTACCCTTGTAGTCTATGCGCGAATTCATATAGCAATCCGCAAAAGCTATCTGAACACGTCCAACAGGTTCACCCAGGCTCGAGTACGATGGGTGTGGGAGATACAGAGTTCTTCTGCGATATATGCGTGAGAACTTTCAAAAGTCGCCAAGCCTTCTCAAACCATATGCGTATTCACGCTAAAGTTCCGACTACTAACCGAAAGCCGGGTGAGCCTAAAAGTTTTGCACCTCAAATCATCGGTAAACCGATTCGACACTTCTCCATGGTACAGCCAGGGTTCAGTCCGTTTAAACCGAATTGCAATGTTCCTAATGCGCCGTATTCATGCGACATTTGCGGTAAAGGATTTATGCATAAGAAAAACATTTGGAAGCATAAGAAGGTTTTACATGCAGACCTTTTGAATGATAGACACGACAGCGAAGAGAATACCATGCACGCGTCTACCGAAGAAGACGAATACAATCCAGATGAGAATGGTGGACTTCTAACTACACCTCAATTTAACAGCTTCAATTTCACTAATCTGTCTAATACCATGCAAGCAACGCCTCAAGAGTCGATGCAATATTCGTGTGAAATGTGTTACAAACGGTTTCCACTCAAAACCAGTTTGTGGAAACATAAACGTGCAAAACACGGTATCATCAATGCCTCTGCGTCCGACACGTCTGTCGAAGTTAATAACAGCCGGTCGAGTTGTACTATATGTAAAATATCGTTCGCTGACAAGAAGTCTTATTACCGTCACAGGAAAAACGTACATAAGTCATCGGTTCAAATGTGTAAAATATGTGGCAAGCCCTTAAACTCTACGTTGGAACTTTACGAGCACTTGAAATCGGCCCATGCCCGAGAATTATTAGGTTATAACGCTACCCAAGGCACTAGTAAAGCTCAGGACATAGGGCAGGAAATAGAAATGGACTACGAAATAGAACAGGAAGCTCCAGATCCAAATGCAGAGTACCAAGCTCGCTATCCGTGTAATACCTGTGGCAAACAATTCGTGGGACTGCTAGCATTGCAAAATCACCAATGTATCAATCAGTTGCAACAACAACCGCAAACTTTTGACTGTGAAATTTGCCACAAGAGTTACACTTCGATCGCTGCGTTGAAAAGCCATCGGGGATGGCATTTACGTTCCCCCGATGGAAAAGCGGCGGCGAACAACAGCGGACTGTGGATGCCGCAGAATAAAGTGACGAGTAAAGTCAGTAAATACGAAGTTGTTGATGCGTCACAGTTAGCTCGCGTATCCCACACCACTACATCGACTCCGACGACCCTTGCCAAGCGAAGATTGCCACCGGAAGTTGAGGTAACTGTCGTCAATCCGAATAAAAAATTGCGCTCAGATGATTCTATAGAAATGGATCAAACGACAAACATGTCTACTGCGGCAGATGATAGATATTGCAATATTTGCGATCGGGAGTTTACTAAACGCGCTGCATACCAGCGTCACATGGACGAGGTGCACCAACCGAACTCAGTATTTTGTCCTGTCTGTGATAAGAGTTTTACACGGAAGTCTACCTTAATAGTGCACATGAAGAAGCATTACGATTCAGGGGAAGGCAGTTCGGGGACAAACGCTCAAGATGATGAGGCAAACGCATGTGAAGTTTGCGGTGAACAATTCGAGAATGCTAACGCTTTGAATATACACCGCGAATCCCAGCACGGCGATGAAGAATCTGCTGAATCGGAAGACGACGGTTCAGTGCCGTTGCCTCAGCCTGGAGAATTTACGTGCGGCCAATGCGGAGATGGCGTTGCGACGCCGCGAGACTTAATAGCCCACCGCACAATGCACGCTACTCCGACTAAATTCTTTTGTAATATTTGCAAGGTGTATTTTGCAAGAGCAATAGATTTGTCGTCACACACGCGCGCCAGGCACGCTGACAACGACAAAGTGTTCTTCCCGTGTGCTATGTGTGACAGATTTTATATGAACAAGAAGAGTTTGCAACGTCATATCGAGATGGCTCACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPGLASKIKNCVSIQINENDELPTNVCRKCMDNVNNWHTFKTVCERTQNKLQSLINKESSHLEEIHIKTEPNEGLSDGGYDDGVVIDGSYPEVENAGSSSKLQPEGPPILASLGLTPRSDKKNIDPRMDWQRVHAILGIVKEDEVIDSLQSTEECEVSYMSDHDSDVESELIEEIPINCSDFKNGYICKNKVILSKNPKLSLVDNVRKIKEVSQMRKMNISTVKSYPQPKNAWQMLVSDDLLELIVTSTNENINRKFKNKPTNMNEMKNLIGILYYHGIMRPTHRKCMDLWDNDYGSVCIRRTMKYERFKFLLENINFDTPDESGIMQLDVMKRIRKVFEIFAMNCRNSMVIGNMAVVDDILLPVHGPCPFRYGIKKRNINQGIKLVLVVDPINFYISNLDVITNTYFGRDDIIMKVVQHLAGSGRIIIMDSWFTSLNLIERLKKEYKLFSIAALNPNDANIPPVFLSQYRKCKPYIGAFLNNDIIISSYVGSNSRVINILSNEPSYYKRSNVNNSVVLQYKKHKSAVEVLDVLMHYYSTMQNSNDWTLSLFFMLLNVASVNAQGVESEKDEEEVEDEEMTEVTDEQVYANPPVPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKITNKKGHNHMQPKLRPNPFNPKARLMPNPISHKMQLLPKQSTSIQLMQQKINPPKPIPIRNLKSTQNSLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEILVSEPEIINSGPESPETLISEPEIASFQVETILSEPDGFVNDAEKDEDIQNHNQHYDTVDMDSENEIEIARQRENEGESEVQAENEGQENDEENIADAEHNDLDKEHNEEINENQDNVLDEQQEEVDEEAKESEEGAEKEDDDHDESQENEDYDPDLPPVEITPVVEINEDMQTNSFVSEINEEEELELDYTADPNDIIDGDDTKELDPDKQYVTKTQRDFIQKYRDIIEQINTKRCLCCNREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNESGITEDQVLEDEPKDPKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVHLACVHCGSRFKDKALWKKHIRNGECTVYIACDLCPEKFGNMQDFNEHALAVHAGSFDPDNQNKCVDGRPTDCPICGKKNSGYPNLVKHLKIIHNEEKPHYCQHCESKYEQAADLNKHIYMEHSDKVLGVQSSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNSHLRVKFYPCSLCANSYSNPQKLSEHVQQVHPGSSTMGVGDTEFFCDICVRTFKSRQAFSNHMRIHAKVPTTNRKPGEPKSFAPQIIGKPIRHFSMVQPGFSPFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNDRHDSEENTMHASTEEDEYNPDENGGLLTTPQFNSFNFTNLSNTMQATPQESMQYSCEMCYKRFPLKTSLWKHKRAKHGIINASASDTSVEVNNSRSSCTICKISFADKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKSAHARELLGYNATQGTSKAQDIGQEIEMDYEIEQEAPDPNAEYQARYPCNTCGKQFVGLLALQNHQCINQLQQQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTSKVSKYEVVDASQLARVSHTTTSTPTTLAKRRLPPEVEVTVVNPNKKLRSDDSIEMDQTTNMSTAADDRYCNICDREFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYDSGEGSSGTNAQDDEANACEVCGEQFENANALNIHRESQHGDEESAESEDDGSVPLPQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARAIDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00710401;
- 90% Identity
- -
- 80% Identity
- -