Hgla021310.1
Basic Information
- Insect
- Hebomoia glaucippe
- Gene Symbol
- clz9
- Assembly
- GCA_025727935.1
- Location
- JAOSYY010002292.1:67-1755[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-08 0.00011 22.0 0.0 3 36 12 45 10 50 0.90 2 2 1.9 4.1e+03 -2.2 0.0 30 45 121 136 121 136 0.80
Sequence Information
- Coding Sequence
- ATGGAAACGAAGAAACGTAAAAAATACACTAAAGCAGAGCTAATTTCTGCTTTAGAGTTAATAAAACAAGGTACGAGTATATACCAAGCATCTCGACTATTTAATATACCAGAGACGACAATAAGGAACAAGCGAGATGGTATATATGAAAATGACACTTGTGGTGTACAGCCTGTGCTAAATATTCaagaggaaaaacgagtcgtcgattgggttcactatcttggtaaatgtggatttccagtcaccaaagaacagttgctggatactgtagctgcactagtgaagaatttagaacgccctaatccatttaaagatggaaggcccggaaaaaactggtacctaggttttttgaaacgacatccgacattaagcaaacgcgtggcacaaaatcttcctttgagtagaaatcagatcacagaaggatcaatacgagggtggtttggaagagttcactcgcattttgaggataacaatttgttagaaatttttgaggacccgaaacgcatatacaactgcgatgaaacagctttctttttatgtccgaaagagaagcaagttttagttaaaaaaggtagcaaacgtgtttataatagggtggccaacgatgaaaaagagtgtttgacagttttagttactgtttcagcggatggagacattgctcctcctatggcactatatccatataagagagatatcccaaaaaatataaaattatctgtacctggatggtggggactcggatacaccgaatctggctggatgaccatggagtctttttacgaatatattactaatgtattctatccttggctttgcgaaaacaaagtcactttccctatagtgctatttttagatggccacacatcacatatatctttacctttgaccacattttgtaaagaaaaagaaatcgtgttagttgctttactgccgaatgctacacacgtcttgcaacctcttgacgttgctgtatttagaccagtgaaagggacttggaaagatattgtccatgatttccgtattaacaatgattacaaacgactaaagcgaccagattttgctaaagaagttcaaaaatgttttgacagatgtttgaaggcagaaacaataagaaatgggttcagatgttgcggaattttcccgtttgaaccaaacaatataaactatgagaaacttttacaacaagcaaaaccaccacaagaaaaTCAACTTACAACTGACGATAGTACGGATCAGAATAATGAGTCACAAAATACAGTATCTGTAGATAAAGATGAATGGTTTAAAAAACAATTTGAGAGTCGACTGTCACCAGAAACTTTGAAGAAATTTAAAGGTGCAGACGGTCATTGGACTGGAGATCAAACGTACGAAAAGTTGTTTTTATTTTGGTGGAACATTGAGTCAGAAAACCGCGATCATCAGGCTAATACTAGTTTTGAACTAGGAAACACAACATTAACTAATAATGTTGATCAAAATGATATATCAGAACTGATTTTTAACTTAGAGTTGGAACCTGATAGTGTTCTAAGCTTGTGCAGCATAGAGGATAATAGGAGACATGAAGAGGTGGTACCAACAACTGACCCGCTACAACCTACGCCGTTTAAAAATATACCTACGCCATTCAAACAGGCTTTTTATTTTCCAAAAGAAAAACAAAATTTGCCTAAAAAAAAATAA
- Protein Sequence
- METKKRKKYTKAELISALELIKQGTSIYQASRLFNIPETTIRNKRDGIYENDTCGVQPVLNIQEEKRVVDWVHYLGKCGFPVTKEQLLDTVAALVKNLERPNPFKDGRPGKNWYLGFLKRHPTLSKRVAQNLPLSRNQITEGSIRGWFGRVHSHFEDNNLLEIFEDPKRIYNCDETAFFLCPKEKQVLVKKGSKRVYNRVANDEKECLTVLVTVSADGDIAPPMALYPYKRDIPKNIKLSVPGWWGLGYTESGWMTMESFYEYITNVFYPWLCENKVTFPIVLFLDGHTSHISLPLTTFCKEKEIVLVALLPNATHVLQPLDVAVFRPVKGTWKDIVHDFRINNDYKRLKRPDFAKEVQKCFDRCLKAETIRNGFRCCGIFPFEPNNINYEKLLQQAKPPQENQLTTDDSTDQNNESQNTVSVDKDEWFKKQFESRLSPETLKKFKGADGHWTGDQTYEKLFLFWWNIESENRDHQANTSFELGNTTLTNNVDQNDISELIFNLELEPDSVLSLCSIEDNRRHEEVVPTTDPLQPTPFKNIPTPFKQAFYFPKEKQNLPKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -