Hgla016198.1
Basic Information
- Insect
- Hebomoia glaucippe
- Gene Symbol
- -
- Assembly
- GCA_025727935.1
- Location
- JAOSYY010000015.1:5263153-5265344[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-09 2.7e-06 27.2 0.0 5 39 171 205 169 211 0.89 2 2 4.9 1e+04 -3.5 0.0 28 40 383 395 383 396 0.81
Sequence Information
- Coding Sequence
- ATGGATTTAAATTTAGTTAAGGAAGAAAAAATAGAAATATTAAGTCGCTGCAAGTGCTGTTTAGACGATGTAAATTTACAGAACATGTGGGAAGAGTCATATAACGATGGGCAGACCGAAATTTATGGAAACATGTTAATGGAGTGTTTTTCATTCACCTGGTTAAGCAAGAGGGGACAAGATCAAGATGATTACATTTGCTATTCATGTGTGGACAGATTGCGAAATGCTCTGAACTTTAAGAGAGAAATAATTGCATCTGAGCAGGTTCTATCTGAAGTACAAGAATCTGGTATTTTTAATAATCAATTTAATGTGGATATAAAAGTTGAACTGACTGATGATGAATATAATAAAGACATTGAGTATCTGGAGGATGACACTGAAATTTTTATAGAAGAAAATATGACAAGTGAAAATAAATTTGAGGACACTCATAAGCGGAAATGGCCTAAAAAGAGAAAACATGGTGAGCGTCTTAAAGTTTACAAAAAATATACTCAATTGGACCTGCGCAAAGCTATTGAAGCTGTAAAAAGTAATAAAATGACAGCTGTAGAAGCTTCTCAAGAATATGATATTCCTAGAAATACAATAAAGAATTATTTAAATAAGGACCTCGCTACATCTAAAGAACAAAATGAATCAAATGAAGACCCAATTAAGGACAAAAGTTTCAGACTCATTGAAGAAATTAAAACATTGCTTACTTATACAAATGCTATGCCATTTAAAACAAAAACAGCAAAATATTACTGTGCATATTGCTCTACAGATGGACCAGTCTTTCAAGATCCTGATGAACTTCGGATTCATACAGAAACTCATGATGAAGAGAGAACTGAAAAAGTAGACCATTTCATGAGACCTTACTGGTTGAATGAAATTTTAAAACTCGATGTACAAAATTTAACTTGTAGTATATGTAATTGTAAACTTCCAGACTGGAATGGAATGTTCCAACATTTTGATAGAGAACACAACATTGAATTTGATGAAGCTTATACCAAGATTGTTCCATACAATCTTTCTGAAACAATTAAATGTGTTTTATGTAATGAAACATTTAACAGCTTCCATCAAGTAGATGGTCATATGAATGGACACTATAACAATTACATTTGTCCAGATTGTGGTGATACATTTGTAGCACACAGTAGATTAGAAAAGCACGTACAAGTCCATAATAGGGGAAATTTTCCTTGCGAGTACTGTGGAAAAATATTCACACTAGACAAATATCGTATGAAGCATTGTAATTTAGTTCATAATGGAGCTAAAATAAAATGCAATTTTTGTCAAGAAAAATTCACTACTGATATACAAAAACATACACATATAGTGGAAAAACATAAAGAACAAGTTAAAGAATACACTTGTGAATATTGCGGCCGAGTGTTTACATATAAACCTTATTTCCTTAAACATGTACAGAGAAGACATACTACTGTAAAAAATCACAAGTGTGAGTACTGTGATAAAGGATTCATAAACCTTCTTGATTTGCAGAAACACATGATTATGCATTCTAGACCAAATAAATATTTTTGTATTTATTGTGGGGAAGGTTTTATGACGAAAATCGCTATACAGAACCATTCTAAAGTCCATAAAAATAAATAA
- Protein Sequence
- MDLNLVKEEKIEILSRCKCCLDDVNLQNMWEESYNDGQTEIYGNMLMECFSFTWLSKRGQDQDDYICYSCVDRLRNALNFKREIIASEQVLSEVQESGIFNNQFNVDIKVELTDDEYNKDIEYLEDDTEIFIEENMTSENKFEDTHKRKWPKKRKHGERLKVYKKYTQLDLRKAIEAVKSNKMTAVEASQEYDIPRNTIKNYLNKDLATSKEQNESNEDPIKDKSFRLIEEIKTLLTYTNAMPFKTKTAKYYCAYCSTDGPVFQDPDELRIHTETHDEERTEKVDHFMRPYWLNEILKLDVQNLTCSICNCKLPDWNGMFQHFDREHNIEFDEAYTKIVPYNLSETIKCVLCNETFNSFHQVDGHMNGHYNNYICPDCGDTFVAHSRLEKHVQVHNRGNFPCEYCGKIFTLDKYRMKHCNLVHNGAKIKCNFCQEKFTTDIQKHTHIVEKHKEQVKEYTCEYCGRVFTYKPYFLKHVQRRHTTVKNHKCEYCDKGFINLLDLQKHMIMHSRPNKYFCIYCGEGFMTKIAIQNHSKVHKNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00771414;
- 90% Identity
- iTF_00771414;
- 80% Identity
- iTF_00771414;