Basic Information

Gene Symbol
Xbp1
Assembly
GCA_025727935.1
Location
JAOSYY010000010.1:5981578-5984932[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.9e-17 7.3e-14 51.8 6.5 2 52 43 93 43 94 0.97
2 2 3.6e-06 0.0034 17.6 2.3 28 55 83 110 82 115 0.90

Sequence Information

Coding Sequence
ATGAGCGCACCGATCATTATCACCGTGCCTAACTACGTGACGGTGGAGGATGGGGACACTGAAGTCATCCTGGATGTGCCCCCAACCACACCGTCAAGGAAGAGAAGGCTGGACCACCTCACGTGGGAGGAAAAAATGCAAAGAAAGAAATTGAAGAATCGCGTTGCAGCACAGACTTCGCGAGATCGCAAGAAAGCTAAGATGGACGAAATGGAAAGCAAAATAAATCACTTCATGGCTATCAACGAGAGACTCGTCAAAGAGGTTGAAGACTTGAAAGCAATGAACGAGCGTCTATTAAGTGAGAATGCATCGCTACGCAGCGAGGCGGCGGCGCGGACCGTCGCGGAGGCCCCAAGACCAGCAGCGTCACCTCAGCAGAAGGAGGGGCCTCCGCCGGCGATCCGCGCGGCTCGTCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACATCCTCGCTCACCTCGAGTCAGACGAATACCTCGACACTCTGCACCAACTTGCAGACTCCCTCCTCAAAGAAATCGATGCAGGTGCTGCTGCAGCGGCTGAAGACGACGCCAATAGGGAAAAAAGACAATGTACTGAAGGACCTCAAGTGGTGGGGACCGCAGCAAAGCAACTGGAATCCAGTGAAAGTGCTCTCTTAG
Protein Sequence
MSAPIIITVPNYVTVEDGDTEVILDVPPTTPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESKINHFMAINERLVKEVEDLKAMNERLLSENASLRSEAAARTVAEAPRPAASPQQKEGPPPAIRAARLLLAMCLLSQTSSLTSSQTNTSTLCTNLQTPSSKKSMQVLLQRLKTTPIGKKDNVLKDLKWWGPQQSNWNPVKVLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01205443;
90% Identity
-
80% Identity
-