Hnig000917.1
Basic Information
- Insect
- Hartigia nigra
- Gene Symbol
- glmp
- Assembly
- GCA_031001745.1
- Location
- JARPRG010000050.1:38805-40662[-]
Transcription Factor Domain
- TF Family
- NCU-G1
- Domain
- NCU-G1 domain
- PFAM
- PF15065
- TF Group
- Unclassified Structure
- Description
- NCU-G1 is a set of highly conserved nuclear proteins rich in proline with a molecular weight of approximately 44 kDa. Especially high levels are detected in human prostate, liver and kidney. NCU-G1 is a dual-function family capable of functioning as a transcription factor as well as a nuclear receptor co-activator by stimulating the transcriptional activity of peroxisome proliferator-activated receptor-alpha (PPAR-alpha) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-123 4e-119 397.7 2.3 2 353 45 401 44 401 0.96
Sequence Information
- Coding Sequence
- atgattttttgtaaattatcatGGATCCTCGTAACTGTgctgtttattaatatttgtcatGGTTCACAACGAATtttaCGTTCTTGGATCAACCCCGGATGTGGAGATTTATGCCAGAAGAAGAATTTAACCACTGTTTGGTTGAGAGCTGATGGGCCTAATGACACATTACATTATGTGTGGGACTTTAATAGAAGTCCATCAATATTATTGGCAGTGACCTCTCTTTCTGCGGAACTTGTCATTGACTGGGAACAGTATGTACTTGGCAAAAGCAAATCTTTACGTTTCACAGAGAAACCACATTATACGTTTGGAATGGTATTAAGAAAgatttatgaatttaatgatgTAAATGACACGGGTCATATAGACACAGTCGATGATtccaatataaatattcttcatcCAAGATCATTTCATTGGGATCGTACATTCTTTTctgaaacaaatgaattagTAGAACTACATATGGAAGGACACGATTACAATAATACAGAAGATAATGTCTCCAGGCatggaagaataaaattactattgaACGGCTTTTGTTCACTGAATCACTCTCAGATTACACCACATATGTTGCACTCTGAAAATTCTATCCAAgttgatataataatagatcATTTGCAAACCAATGCCAGCTTTCAACAAAGTAGATTTTCTATTGAAGTTTTATTAGTTAGCGAAGGAAATACCAATGCTACAATGACAATCGATGCCAAGAAAAGTCTAGACGATGAACATACCCCAGGAATATTTGAGGTAGATGAAATCAGAACTCCATACAATGgtaatgaaaatgatactCAGAACATGGGAGCTTACATACAGTGGAAACCAGTCTCTTACACTACTTCGGAGAGAGACGTAACTAGTTCAATcgatttaattcattattctcTAGTTAAATCTTATAATCATACAGAAGCGACAAAGAACTTGTTGCTGTTTTCATTTTATGGTGAAAACGTGACTGAACTCTTAGTACAAAAGATTAATGTGTCCTTGGGTTCAAGAGGCGACGGTTTTTATAAGAAAACCAACTATACCACCTGGACTCTCATTGTTGGTTATGGAACGCCTCCAAATGAGCAGTTTTCTTATCTGGTCATTATGATTATATCGATCGGACTTGGATTAccgttatttattatgatttcgACGGGTTTATATCTGTGTATACGCCGGTTGCGCAAGGGAGATAGTGATGTACTCTTGAACAGATAA
- Protein Sequence
- MIFCKLSWILVTVLFINICHGSQRILRSWINPGCGDLCQKKNLTTVWLRADGPNDTLHYVWDFNRSPSILLAVTSLSAELVIDWEQYVLGKSKSLRFTEKPHYTFGMVLRKIYEFNDVNDTGHIDTVDDSNINILHPRSFHWDRTFFSETNELVELHMEGHDYNNTEDNVSRHGRIKLLLNGFCSLNHSQITPHMLHSENSIQVDIIIDHLQTNASFQQSRFSIEVLLVSEGNTNATMTIDAKKSLDDEHTPGIFEVDEIRTPYNGNENDTQNMGAYIQWKPVSYTTSERDVTSSIDLIHYSLVKSYNHTEATKNLLLFSFYGENVTELLVQKINVSLGSRGDGFYKKTNYTTWTLIVGYGTPPNEQFSYLVIMIISIGLGLPLFIMISTGLYLCIRRLRKGDSDVLLNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01198674; iTF_01199414; iTF_01395133; iTF_00296025; iTF_00293730; iTF_01473188; iTF_01475460; iTF_01130823; iTF_00253577; iTF_01474697; iTF_01473935; iTF_00252080; iTF_00298320; iTF_00255090; iTF_00296790; iTF_00292279; iTF_00294487; iTF_00297561; iTF_00252826; iTF_00291546; iTF_00295258; iTF_00292957; iTF_00254334;
- 90% Identity
- iTF_01198674; iTF_01199414;
- 80% Identity
- iTF_01198674; iTF_01199414;