Basic Information

Insect: Hartigia nigra
Gene Symbol: ct
Assembly: GCA_031001745.1
Location: JARPRG010000537.1:816855-831825[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.1e-27 4.8e-24 84.2 0.0 2 72 412 483 411 488 0.95

2 3 1.9e-32 8.4e-29 99.4 0.0 2 77 820 896 819 898 0.96

3 3 1e-30 4.7e-27 93.8 0.0 3 75 1047 1120 1045 1124 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.1e-27	4.8e-24	84.2	2	72	412	483	411	488	0.95
2	3	1.9e-32	8.4e-29	99.4	2	77	820	896	819	898	0.96
3	3	1e-30	4.7e-27	93.8	3	75	1047	1120	1045	1124	0.95

Sequence Information

Coding Sequence: ATGCCTGGCGCTGGTAGCCAGTGGCGGTTCACGCTAAATCAAAGAGAGAAGatCGGACAACTCGCCGAGGAAGTGTCGAGGCTTCAGCAGAGTCTTCAGCGACTCCAAGAGACGAGCGCTCAATCGACGGCGCGTCTCGAGGAGGAACTCGAGGCCAGGAGGCAACACATAAACAGACTGGAGAGTAAACTCGAGAGGCAACGGGATTACGAAGATCTGAAACGTGAAATCAGCGTTCTGAGGTCTGTTGACCTGTCGCAAATCCCGACCGGGGAACCCGGCAAGAGTCTCGAACATCTCCTGATGGAACGTTCGAAGGCTCTGCAGCAGGCGGAAATCCTCAAGCCACCGAGCACACCGGATGCTCTCGGTGGATTGTCGTCACCCCTGCAGCGCGCCGCGACCGCCTCACCCCACGGCGGCACTGCGCCATCCACCCTCGTATCCCAAGCACTCCCGAACCGCTCTACCCCAACACCCTCGTCAGCCACCTCGACGAGTTCGAGTCTCCTTTTCCCGCCACCTCTCCAAAACGTCGAGACGTTCGGCTCGTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGCTCCCTGGAGAGGTCGATCATGAGCCAGCAGCAACCCCAAGTGCAATCCCAAAGTCAGCAGCAGCCCGTCGCTGCCTTACACCCGCCGACAACACCGAGTCTAAACCACCTTCCGTCGCCAACAGATCCGACGTCAAGCTCGACGCCGGCCAAGTCGAGCACACCCCTAGGAAGTGGTCCGGACGTCTCGGAGAAAGCACCGACGCCGATCCCGGGACACGAAACACCGGCGCCGCCAACACCCTCCTCGACCACAGCCCTGACGTCGCCATCGGCCCTACAAGCACCACACGAACCCCCGGTCAACGGGGCACTGCCACCAAAGAGTCCCGCTGAGGAATCCTGTCAccacaacaacaataacaactcTCATCACTTGACCAACAATAACATCGGAAGTGCTGGTATCGGgggaggtggaggtggaggcggcggtggaggaggaggcggTACCGGTGGCCTCAGCGTACTGGACACCCTCAAGAGTCCCTTTCGTTTTGACGACCGGACGCATCCATTCCGATTTGGTGACGAATTCGGCGCCGCAGGTATGGCTGGCCGTCTCGGCGAGTCGCTCATACCTAAGGGCGATCCCATGGAGGCACGACTCCAGGAAATGCTGCGGTACAACATGGACAAGTACGCCTCGCAAAATCTCGACACGCTACACATTGCCAGGAGAGTGCGGGAGCTTCTCTCGATACACAACATTGGCCAGAGACTCTTTGCCAAGTACGTGCTTGGCCTAAGCCAGGGCACCGTTAGCGAGCTTCTCAGCAAGCCCAAACCCTGGGACAAACTGACTGAGAAGGGTCGCGACAGCTATCGCAAGATGCACGGCTGGGCTTGCGATGACAACGCTGTTATGCTGCTCAAGTCTCTCATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCGGCGTTCGCAAGAGGTCCTCAGGACGGTGGTCCACCTGACATGAGCGACGAGAGGCTGGCTCACATCCTCTCAGAATCGGGTCACCTGCAGATGAGAGGAGATCACGAAATGTCGAATGACGCCGACAGCAAGAGTCCCAGTAGGGTCGGTTGTCCGAGTCCCTTCGGCAAGGATCGGCTGGACAGCCAAAACAGGAGACTGAAGAAGTACGAGAACGATGACATTCCCCAGGAGAAGGTTGTAAGGATCTACCAGGAGGAGCTGGCTAAGCTGATGGGAAGGAGGGTCGATGACTTAAGAGGACCTCGAGAATTTCCACCGAGCGCGATGTTTCCTCACTTTTTCAGTGGCGCCCAGGGTCTTCAGGGTATGGAGAGGACCCAGGAGGAAATAAGGCTGGCTCTGGATGCGTATCATCGTGAACTCCAAAAGTTGAACGTGGCACCAGGGCAGAATCCAGCATTGGCGGGACTTCCAGGACTTCCAGGATTGCCAGGATTGCTGGCACTGCAACAGCAGGCTCTTCAGCAGCATCATTTGGCCGCGAACGGCGGTGGCGTTCAAGATCTTAGCCTGGGTAAGGTCGACCCTAGGAACAAAATGATGAACGGAGTGTCtgaggaggaaaaagaaaagatggaagAAGCTATGAGGCACGCCGGAAGTGCTTTCTCTTTGGTCAGACCTAAGCAGGAACCCAGTGGGCCCCAATCTACCCCTGGTGGTTCCAGTGCCAGTTCACCCCTTGGCAATTCCATACTTCCACCTGCCATGACGCCCAGTGAAGAATTCTCAGGAGCTGCGGCTGCCAGTCCACTCCAGAGGATGGCCTCCATTACAAACAGTCTGATCAGCCAACCGTCCACACCGACTCATCATTCAGCCAATCAACGCCCACTAAAGGCAGTCCTTCCACCAATAACGCAGCAGCAGTTCGATATGTACAACAACCTCAACACAGAAGACATTGTCAAGAGGGTAAAGGAACAGCTCTCGCAGTATTCAATTTCTCAACGTCTCTTCGGCGAGTCTGTCCTGGGTCTATCTCAGGGCTCGGTCTCTGATCTTCTGGCGCGTCCTAAACCCTGGCATATGCTCACCCAGAAGGGTCGGGAGCCTTTCATTCGTATGAAGATGTTCCTCGAGGATGACAACGCTGTACACAAACTCGTTGCCAGCCAGTATAAGATCGCCCCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGcttGTGGAACACCCATGAAACCAATGCCCCCGACTAAGTTGGTCCAGGAACAGCTTCAGAATGCTGCCAAGGCACAGGCGGCGGCGCAGGCTGCGGCACAGGCTGCTGCTCAGCATCAGCAGGAGAGCCAGATGCAGCTTGGACCACCTCAACAGAGCCCGCAGCATCCCCAGCATCCTCAGCCACCTCCACCAATGATGTTAACTCCTACTGGACCTCATCATCCACACGGGCAAATAAGCATGCAGGAACTACAGAAAAAACAGCAACAGATGAGTCTTCACTCTCCACATCATCAGATGACGCCATCTCCACTTCGCAGTTTGCATCCTCACATCTCTCCGAGTGTTTACGAGATGGCTGCCCTTACCCAGGATCTGGATACGCAGACCATCACGACCAAAATCAAGGAGGCACTTCTCGCGAATAATATCGGACAGAAAATATTCGGTGAGGCTGTCCTGGGCCTTTCGCAAGGATCCGTCAGTGAGTTACTGAGCAAACCTAAACCTTGGCATATGCTGAGTATCAAGGGTCGGGAACCCTTCATCAGGATGCAACTCTGGCTCTCGGATGCACACAACGTAGATAGACTGCAGGCTTTGAAGAACGAGAGAAGGGAAGCCAACAAAAGACGGCGTAGCAGTGGACCCGGACACGATAACAGTTCGGATACCTCGAGTAACGACACAGCTGAGTTCTACCACGCAGCATCCCCAGGTCCTGGACCGGCATCAGCCAAAAAACAAAGGGTCCTCTTCTCAGAGGAGCAGAAGGAGGCGTTGAGACTGGCATTCGCTCTTGATCCCTATCCCAATGTCGCCACGATAGAATTCCTGGCAGGTGAATTAGCCCTATCATCCAGAACGATAACGAACTGGTTTCACAATCATAGGATGAGGTTGAAACAGCAAACGCCACACGGGCAACCAGAGCCTCAATCGCCTCGGGAACCTGGACAGCCCTTTGACCCGGTTCAATTCAGACTGCTTCTAAACCAAAGATTACTGGAGATCCAGAAGGAGAGATTGGGTCTGGGTAACATGCCCATCCCTTACTCGCCATACTTCAACCCTAATCTAGCCGCTCTAGTTGGCAACGCTCTTAAGGAGCAATGCTCGGGTCTGGACCTCTCAATGGGAGCCCTTAAAAGGGAGCCTAATCAAGAATTCGAGGACGAAGATGCTGATGACGCCATGAGCAATCTAGGTAGCGAAGACTCGGACGGTTCGGCTGGTAGTATAAAGCGAGAACCGACAGAGACGCCGGCGCCGACGACTGCTAGATCAAATCGGAGAAAACCTGCAGCCCCTCAATGGGTCAATCCCGAGTGGCAAGAGCCAGCGAGAACCGGTGACGAGGTCATCATCAACGGGGTCTGCGTGATGCAGACCGACGACTATGGCGTCAAGAGAGAAGCTGAAGAGACCGTCAGAGTAGAACCGACGCCAGTTCAAGACAGATACGAGGAGGACGCCCAAAGTGATGTATCCTCTGTATCCGGGAACAATGGTCAGGATAGGGATAGTCCTATGCCAAGTCTAAAATCAGGACAGAACAGTCCAGCAACCTCGCCGAGGCCGCCATCCGTGCAGCAGGCGCAACAGTCGACGGAGGAGAGTTCGAAGGACGTAGTGAAACACGAACCCGAAGAAACGGCTTGGGATTACTAA
Protein Sequence: MPGAGSQWRFTLNQREKIGQLAEEVSRLQQSLQRLQETSAQSTARLEEELEARRQHINRLESKLERQRDYEDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERSKALQQAEILKPPSTPDALGGLSSPLQRAATASPHGGTAPSTLVSQALPNRSTPTPSSATSTSSSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQPQVQSQSQQQPVAALHPPTTPSLNHLPSPTDPTSSSTPAKSSTPLGSGPDVSEKAPTPIPGHETPAPPTPSSTTALTSPSALQAPHEPPVNGALPPKSPAEESCHHNNNNNSHHLTNNNIGSAGIGGGGGGGGGGGGGGTGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVSGKEQGMPAFARGPQDGGPPDMSDERLAHILSESGHLQMRGDHEMSNDADSKSPSRVGCPSPFGKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPREFPPSAMFPHFFSGAQGLQGMERTQEEIRLALDAYHRELQKLNVAPGQNPALAGLPGLPGLPGLLALQQQALQQHHLAANGGGVQDLSLGKVDPRNKMMNGVSEEEKEKMEEAMRHAGSAFSLVRPKQEPSGPQSTPGGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQESQMQLGPPQQSPQHPQHPQPPPPMMLTPTGPHHPHGQISMQELQKKQQQMSLHSPHHQMTPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNMPIPYSPYFNPNLAALVGNALKEQCSGLDLSMGALKREPNQEFEDEDADDAMSNLGSEDSDGSAGSIKREPTETPAPTTARSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAQSDVSSVSGNNGQDRDSPMPSLKSGQNSPATSPRPPSVQQAQQSTEESSKDVVKHEPEETAWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01394913;
90% Identity: iTF_01475233;
80% Identity: iTF_00770269;