Hnig012274.2
Basic Information
- Insect
- Hartigia nigra
- Gene Symbol
- kn
- Assembly
- GCA_031001745.1
- Location
- JARPRG010000634.1:60253-66000[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-114 5.3e-110 368.4 13.1 205 519 1 317 1 346 0.79
Sequence Information
- Coding Sequence
- ATGAGACGCTTTCAGgTTATCATTTCTACCCAGGTCGAAGTGGAAGGACCACTGCTCGCAGTGTCCGACAACATGTTTGTACACAACAACAGCAAACACGGTCGCAGAGCGAAGAGACTCGATCCCAGCGATCCTGGCGAGTACAACAcTCTTTATCCTCCGTTACCGGTCGCCACGCCCTGTATAAAGGCGGTATCGCCAAGCGAAGGTTGGACGTCGGGTGGATCTACGGTCATCATCGTTGGCGACAATTTTTTCGACGGGCTACAAGTCGTCTTTGGCACGATGCTTGTATGGAGCgagTTAATCACTGCACACGCAATCAGGGTGCAAACACCACCGCGACAGATACCAGGCGTCGTGGAAGTCACGCTATCATACAAAAGCAAGCAATTTTGCAAGGGTGCGCCTGGACGCTTCGTTTACGTCTCATTAACCGAGCCATCGATCGACTACGGTTTCCAAAGGTTACAAAAATTGGTCCCACGGCACCCAAGCGATCCGGAAAAATTAGCTAAGGACACGATCCTAAAAAGAGCGGCGGACCTGGTGGAAGCATTTTACACAATGTCCAGAAATGGAAACACGGGAATACCAGGAGCACCAAGAAGTCCAGGCTCAGGACATCCCCCAGCTCCACCAACGTCCAGTTCAGCCACAGCCTTCAACTCGTATACAGGTCAACTAGCAGTAACCGTCCAGGAAAACGGTAGCGCAAAATGGACGGATGACGGGGGTTCAGTGACGACAGGAGCCGGTGGCGGAGCCGGGGCTGGTAGCGTAGGGGGTAGCGCCGACGCCTACAGGCAAAGTAGCAGCGCAAGCCCCAGAGGGGTTGTAACCGGTGGTGGCTACTGCGGCAGCTCAGCAAGTACACCCCATAGTCATAGCACCAGTGGTAGCTACTCCGTGGCCAATCCGTACACGGGTAGCCCAACGCTCTACACCTCCCCGCACGAACAATACAGCATTCTCTATACGTCCGGGGACGCGAGTGCATTCCGACCACCGATCACCTCAGTCCCACCGCACTGGTCCACCCAGCACCACCTCGCAACAGCTGCTCAGTAA
- Protein Sequence
- MRRFQVIISTQVEVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPGEYNTLYPPLPVATPCIKAVSPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITAHAIRVQTPPRQIPGVVEVTLSYKSKQFCKGAPGRFVYVSLTEPSIDYGFQRLQKLVPRHPSDPEKLAKDTILKRAADLVEAFYTMSRNGNTGIPGAPRSPGSGHPPAPPTSSSATAFNSYTGQLAVTVQENGSAKWTDDGGSVTTGAGGGAGAGSVGGSADAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTSGSYSVANPYTGSPTLYTSPHEQYSILYTSGDASAFRPPITSVPPHWSTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01489186;
- 90% Identity
- iTF_01474467;
- 80% Identity
- iTF_01198451; iTF_01199189;