Hnig005150.1
Basic Information
- Insect
- Hartigia nigra
- Gene Symbol
- Tef
- Assembly
- GCA_031001745.1
- Location
- JARPRG010000294.1:2958797-2959735[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5 5.4e+03 -2.5 0.1 29 40 19 30 16 41 0.55 2 2 5.6e-17 4e-14 52.4 7.7 4 62 251 309 248 311 0.95
Sequence Information
- Coding Sequence
- atggaggatTATCAAACGGCTATGGATAATCTAGAAGCGTTAGATTTCACACAGAATTTGAATAAGAAAGTGAACGAGTGTTCATTGGAGACACCGGTGCTGGATCTTTCCTGTAAAAAACAAACACGGATTATGAATGATTGTTTGCCAATGGGATATGAAGAATCTATTGAGTGCATTTCGAATAGTCGTCAACAACAGTCGGAACATCAGTGCCACGaattggaaagaaaaagtccaTTCGAAGGACGAACTTTCATGGTGACGCCACCTTCGGAAACGGATTCACCAAAAAAGATCAAATATGAGACGATTTACAATCAACAAGGAATTAGTATGAGCAATGAGACTATGGGTCATCAAACTTATCCTATAATGCCAATAGCTTCCATACCAGCACCCAGTGTATTGTCTGGTTTACTTCCCATTGGACAGAGCATCATTCCttcttcgaaaaatcatcAACTTACGGTCTCTACTGTAAATCAGGATACGTTGTCTCCGTCGCAATCGCCGGAAATGACGAAAAAGGCGCCAAGACCCTTCAAAGCTTATCCCAAGGATCCTCTTTCGCTGGCCATGGGCACTGCTGAGTTGGTATACGATCAAAATTCGACTGAGGCTTACTCGGAATTTCGAAAACGGATGCTGGAGTCTGTAAGGAGGACCAATGAGGGTACCAACATCAAGATGAGGAGAGTGACGAAGAGTCCTGGCTTGCCGACTAGTACGGTAGATGAGAAGGATGCTGCTTATTGGGAAAGAAGACGGAAGAATAATGAAGCTGCAAAACGGTCCAGGGACGCCAGAAGAGCGAAGGAAGATGAAATTGCAATCAGGGCTGCATTCCTCgaacaagaaaatatgaaattgaagtACGAATTGGTAGCGTTAAGAAACGAGACGGCTAAACTCAGATGTATGGTCTATTCTAATTGA
- Protein Sequence
- MEDYQTAMDNLEALDFTQNLNKKVNECSLETPVLDLSCKKQTRIMNDCLPMGYEESIECISNSRQQQSEHQCHELERKSPFEGRTFMVTPPSETDSPKKIKYETIYNQQGISMSNETMGHQTYPIMPIASIPAPSVLSGLLPIGQSIIPSSKNHQLTVSTVNQDTLSPSQSPEMTKKAPRPFKAYPKDPLSLAMGTAELVYDQNSTEAYSEFRKRMLESVRRTNEGTNIKMRRVTKSPGLPTSTVDEKDAAYWERRRKNNEAAKRSRDARRAKEDEIAIRAAFLEQENMKLKYELVALRNETAKLRCMVYSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394869;
- 90% Identity
- iTF_00292683;
- 80% Identity
- -