Basic Information

Insect: Harpegnathos saltator
Gene Symbol: -
Assembly: GCA_003227715.1
Location: NW:558150-594502[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0022 0.14 12.1 0.7 2 21 174 193 173 194 0.94

2 19 0.16 10 6.3 4.7 2 23 202 224 201 224 0.92

3 19 0.031 2 8.5 9.0 2 23 235 257 234 257 0.91

4 19 0.00032 0.021 14.7 1.4 1 23 624 647 624 647 0.96

5 19 1.8 1.1e+02 3.0 0.9 5 23 654 673 653 673 0.94

6 19 0.56 36 4.5 0.7 2 23 679 700 679 700 0.96

7 19 0.16 10 6.2 0.5 1 15 726 740 726 744 0.80

8 19 9.3e-07 5.9e-05 22.7 0.2 1 22 911 932 911 932 0.96

9 19 0.00023 0.014 15.2 0.2 3 23 940 961 939 961 0.93

10 19 0.85 54 4.0 2.9 1 23 971 994 971 994 0.90

11 19 0.72 46 4.2 0.1 2 21 1022 1041 1022 1042 0.90

12 19 1.6 1e+02 3.1 4.5 1 23 1049 1072 1049 1072 0.91

13 19 0.61 39 4.4 5.5 1 23 1083 1106 1083 1106 0.91

14 19 0.014 0.92 9.6 1.5 1 20 1153 1172 1153 1173 0.95

15 19 4.5 2.9e+02 1.7 4.4 1 23 1181 1204 1181 1204 0.88

16 19 0.2 13 5.9 5.5 3 21 1248 1266 1247 1267 0.91

17 19 0.006 0.39 10.7 1.7 1 23 1279 1302 1279 1302 0.96

18 19 0.016 1 9.4 0.5 1 23 1514 1537 1514 1537 0.97

19 19 0.26 17 5.6 1.5 2 23 1561 1583 1560 1583 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0022	0.14	12.1	0.7	2	21	174	193	173	194	0.94
2	19	0.16	10	6.3	4.7	2	23	202	224	201	224	0.92
3	19	0.031	2	8.5	9.0	2	23	235	257	234	257	0.91
4	19	0.00032	0.021	14.7	1.4	1	23	624	647	624	647	0.96
5	19	1.8	1.1e+02	3.0	0.9	5	23	654	673	653	673	0.94
6	19	0.56	36	4.5	0.7	2	23	679	700	679	700	0.96
7	19	0.16	10	6.2	0.5	1	15	726	740	726	744	0.80
8	19	9.3e-07	5.9e-05	22.7	0.2	1	22	911	932	911	932	0.96
9	19	0.00023	0.014	15.2	0.2	3	23	940	961	939	961	0.93
10	19	0.85	54	4.0	2.9	1	23	971	994	971	994	0.90
11	19	0.72	46	4.2	0.1	2	21	1022	1041	1022	1042	0.90
12	19	1.6	1e+02	3.1	4.5	1	23	1049	1072	1049	1072	0.91
13	19	0.61	39	4.4	5.5	1	23	1083	1106	1083	1106	0.91
14	19	0.014	0.92	9.6	1.5	1	20	1153	1172	1153	1173	0.95
15	19	4.5	2.9e+02	1.7	4.4	1	23	1181	1204	1181	1204	0.88
16	19	0.2	13	5.9	5.5	3	21	1248	1266	1247	1267	0.91
17	19	0.006	0.39	10.7	1.7	1	23	1279	1302	1279	1302	0.96
18	19	0.016	1	9.4	0.5	1	23	1514	1537	1514	1537	0.97
19	19	0.26	17	5.6	1.5	2	23	1561	1583	1560	1583	0.95

Sequence Information

Coding Sequence: ATGGCTCGAGTTGTAATATATGAGAGACCTGTAGATGCCATCCATACGAAGACCCATATAGGTCAAATATCCGCTATAGAAATCCAGAATGGAATGAAGATTAAAGAAGAACCTATCGATGCAACAATGGATGATAACACAACTGACAATTATAAGTTTTTAAGGAGTCGTTCTAAACGATCTGATGGCGGCaaatcattattaataaaaaagaatgatGTACTGTGTAAATGTATAAACCATAAAACAGAAGATTGTGTAGATGATAATCGTTCTAAGTGTTCGGATGATTCTGGACTAACTAACACTATTAATCTGAAACGCAAACGAACAACTGAAAAAGAACATGTACGTAACATTTTGCCAGTACttagaaaaaaacgaaaacgTTTTGATGTCATTCGTTATGGCTATACTAATACTAAATCGACTAAAGGACGAGCGAagaacgaagaaagagagcaacCTGTTATGCCAAAATCAAATATTGCGCGcaatacaaataataaaagaggAACCAAATGTAACGTGTGCTTCATAAACTTCAAGAGTTCTCGAAACCTTCAGCTGCATCAGCTATACTTTTTGAGAGTTGGAACATTGAGATGCAAGTTTTGTAGCAAACGTTGCAAATCGCAAGCAGAACTATATTTACACGTCATTTTGTGCCACAAAAAAGAGCCAGAACAATGTTGCAAAAAATACTGTCATTTTTGTAATCGTagttttaaaaaaaaacattatttACAATCTCATTTGTTTCACGTACATGATGAGTTAATATATTCAAATAAAGCAATTGAAGTCGAAAAATCCGCAGTCGTCCTTAAAAATACGTCTTGTAAAAATACCTCGAAGAATTCCGTACATGAAGAATCACGTTTAAATAATCTTGATGAATCCAAAGGATTAAGTACCATTCTTATAAATAAGAGTTGTAAACAATCTTCAGATGATGGCACAACAAAGATGGATAAATTAATTGATCAGCAATCCAATCAAGAAACATTACTTACAAAAAAATTACGACAGCCAACATTAAATGAATACATCGAACTTTGCAAGAAAAAACGCGATACTAAAGATGATCTACAGCAATTACACATTATGAAAGACGGTTTATCTACACATGCTTCAAGTCATAACGAACAATTAGAAAATCTGAAACCAAAACTTTTAAAAGAGGCGATACATAATGGACAAATCCATACCTCGACTGAAAaattcaataataatttagAACAAATAACATATGCTTCCACTTTTGAACAAAGTGAAAATTCTTGTGAAGAATGTCCTACCAAAGAACCTTTTGTAAAATTACATGCGGATGTTGAAATGATGAAGTGTTTTCTGGAGAATCTTCCAGACGCAAATGTTGAAAGTGAAAAGTTCCAAGATCAAATAAAAAACACAATGTTATCTGAACACGACATTCCCTATAGTTTACGACCTACGAGGGCTATTCGTTTTTTGggatatttaaataaaaagaactttacttttcttaagAAATCTCAACTTGACTTGAAAAGCAATACTAAAATGGAACAGCATGCAAATGGTGTGGACAAAGCAGATTTGGATTCTTCAAAAATTACTATGACTCGTCCTAAATTTAAGGATTGTACAATTACTTTGAAGAGATGTGATGAAAAGCTAAAAAATCATCCTGATTCTACAACTCAGATTACGTTTGAGCAAGACTTGATTTCCCCAATTACTGAGCCAAACTCTACATTTCAAAAGAATGATGTGAAAAATAATGTTGTACTCAAAGAATTGGAAATTTCTTTAGAACGCTTAAAAACTGAACAAGCTGAAGATAATCTGGAAACAGACATCGAGAAACAAGATGATGACAATTGCTTTACCTGTAAACTCTGCGAGAAGAGCTTTCCAACAAAAATAAACAGACGAATGCATATCAAGGAATCTCATATGGCATACATGTCAAGCATATGCAACGCACGATATACGTTGAAACATAAATTGCTTCAACATTATTTGCGCGAACATACATTCAAAGCAAACGAATGTTGTGTTTGTAATGTATTATTATCCGATACTGCAGAGCTGAAACAACACTTAAATTATcattgtctgaaatatttccaAAACAAAGATGACCAATATCCAATAAATATTGATGTAAATTGCTCAGAAAAAGGAACTTACACTTGCCTTAAATGTAATGAGACATTCTCGTCCCATTTATTATGGTCAGTGCATGATCGTTATTGCCCAATACAAGAAAAAGTGGATGAAGTTCAGAAGGATTCTACTACGGAGACGAATACTTTAGAAGTCACTCTTCAAAGTAACACTCTCAATCGCAACGATGTTGATACAAACACGGTTATacacaataaaaatattcaacatGTCTCACATGAGCTTCCAAATAATAAGCGCGTGGAAGAACCGGACACGATTCGAATAGTGCCAGTTAATGAAGAGCTAAGAAATAACGAAAAAGATATGGAAATAATCGAAGAACCTAACATTATTGAAgagaatttgaaaattaatgaaaatgatgaaaatttttttggtaggaaaacaatttttatcgTGGAAAATATTGGAATCTCCAAAGAATTACAGAAGCCTACCAAACATCCACAAACTGTTAATCCTCCAATCGTTAATAATTCCATAATCAGTGACCAAGATACTACAAGTGTCTACAGTCTACAGTCGAATTCTACTGAATCAAATGTTAAGACGTATCCATGTGATATATGTGGAAAGCGATTCCAAAATCAGAAGAACTTAGAGCAACATATACGCAGTTTCAGTCGTGTCACCGAGTTTTGTCCACTATGTAATACTGCATTCAGTTCGAAACGTTATCTACAATCGCACATTGCCGCGGCACATGTACCACAATTGTCAAAGAATTATGATTTTCACTGCGTATTTTGTAATCAAGGTTTCGTTAAGAAATATGATCTTCGACCACACGTGTTGCATCTGCACGGCCGACAGATGCTCGAAACAATTATGCCCAATTTCCGTAATACTCCAGGAAAAGATGACGAATCAAATAACGGTAATGCAACGTGCAGTGTGTGCAACTTAGCATTTGAGACTCTTGATCGTTATGTAGAACATAGAATGTATTATTACAAGAATCACAAGTTTACATGCTCCATCTGCTCGAAAGATTTTGAAGGCATGTATATGTATCATCATCATAACAAGCTTAATCACTATCCAGAGGATAAGCGTAAATCCTATATTTATACCTGCAACATATGCAAAGAGGGATTCAATCACGAGTTACATTTTTATTCACACAACATGCATGTTCATCCTGATGAAGCTAATTCAGCTGAAATTGTGCAACAATCTACAAGATATGCTCAGTCAGTAAATAATATGGAAGGAGATGAACAAGTTATAGATTTGTCTATGAATCAACAAAACAAAGCTCAACTATCGTCCACTGACTACATTTGCCAGATTTGTCaatttaaatgtaaaaatGCTGATGACTTGAAGAGTCATAAATTATTCTACGCCAACGATGGTGATTTTAAATGTAATCTTTGTAACAGATTATGTAGAACTCGCAACGTGCTTGATCAGCACAAGAGTTTTACTCATATCTGTCGTGATGTCTATAATGAACATATGTGTCAACGTTGTAATGAAATATTGCCATCGATTACTTCATTGAGATGCCATGAAAAACATTTTCATGCTAATTTAGTTTCATATAGTAATACAAATAATTGTAAATACTGTGGTCAGACATTTTCTTCAAGTACTGAATGCAAGGAGCATCAATGTAAATCTACTAGTAGTAAAACCAAGGAGAAATACATATATCGTTGCTTTTACTGTGATATGAAGTTTGTTTCTCTTGAAACGATTCATAAGCATATTCTTCAGGCTCATTTTAGTAAGATCTTCGTTAAACATGTTGCTTCAAATCTGGAACTTCCCTCTGTTAGTAACGATAAAATTCAGAAGAAAACTATTCTGGACTTGGTAGACCAAGTAGTAGTGTCTAGGAAGAACATAATTCAATCTTTTCAACAATCTTGTAATGGTCAGAACAGTATTTCGATTATGCAGGATACACAAGATAAAGTTGCTATTGAACCAACACCAGAAGCTCTCAAAGCTTTATTCCTAATAGACGTTGAACCTAAGCAGAAGACTCTAAATTCTACATCAACGATTAATGGATCTGAAGCCACAACGATGAACTGCAACATAACCACAACGAGGGAAGTAGAACAGAATAATCAATCTAAAGCTATCACTCCAGTTCCTACATCCACTGAATCAACTGATATATCAACAAAAAATCATAGTTTATCTGATTCCTTCAACATATCTCTGGAGCAAATGTTAGATGGGCACTCGATTTTCTCAACTGGATCTGCTGACAAATCTAAAGCAACTTTTACTAATGTCCCACCTAAATCAAGTAATATATCTAATACTCCTGTTACCGCAGCTCCTATTCCTAGAAATGAAGAGATTATATTACAGAACTGTGTGTCAGTAAATAATACTACTGATTATTCTTGTCCATTATGTCCGTTACAATATCCGTCTTTAATGTATTTCCACGCTCATTTGAGATACGCACATTCAGATTTAATTCGAAATGATTTGATTTATCCACAATTGGATCAATTATCCGAGAAGATTCCTGTAATAGAGTGTTTATTGTGCCCACGTATCAGTACTGACGAGAAAAGGTACAAGAGGCATTTGCGTCACTCCCATTCATCTCACATGTATCTCACAAATTTTAAGGAGACTAAGAAGATCGTTGATGCGAGCAGTTCCTTAACAACACAAACAAACAGTAATAACAAAACCATAACGCCCGAAGTCATCACCGTGGaagatgacgatgatgatggcAAAAATTCCTTAGTTGAGCGAGCAGCTGCTGAAACAGCCGTAGAGAAAACTACCTGCGCTCCTAGTACAGGGAATGAAAATGTTGGTAAATTGAAAGTGAAGtcttttgcaaaaattatcGAGAATTTAGCTATTGATCGTGCAAaggaattattaaataaaccCAACTAA
Protein Sequence: MARVVIYERPVDAIHTKTHIGQISAIEIQNGMKIKEEPIDATMDDNTTDNYKFLRSRSKRSDGGKSLLIKKNDVLCKCINHKTEDCVDDNRSKCSDDSGLTNTINLKRKRTTEKEHVRNILPVLRKKRKRFDVIRYGYTNTKSTKGRAKNEEREQPVMPKSNIARNTNNKRGTKCNVCFINFKSSRNLQLHQLYFLRVGTLRCKFCSKRCKSQAELYLHVILCHKKEPEQCCKKYCHFCNRSFKKKHYLQSHLFHVHDELIYSNKAIEVEKSAVVLKNTSCKNTSKNSVHEESRLNNLDESKGLSTILINKSCKQSSDDGTTKMDKLIDQQSNQETLLTKKLRQPTLNEYIELCKKKRDTKDDLQQLHIMKDGLSTHASSHNEQLENLKPKLLKEAIHNGQIHTSTEKFNNNLEQITYASTFEQSENSCEECPTKEPFVKLHADVEMMKCFLENLPDANVESEKFQDQIKNTMLSEHDIPYSLRPTRAIRFLGYLNKKNFTFLKKSQLDLKSNTKMEQHANGVDKADLDSSKITMTRPKFKDCTITLKRCDEKLKNHPDSTTQITFEQDLISPITEPNSTFQKNDVKNNVVLKELEISLERLKTEQAEDNLETDIEKQDDDNCFTCKLCEKSFPTKINRRMHIKESHMAYMSSICNARYTLKHKLLQHYLREHTFKANECCVCNVLLSDTAELKQHLNYHCLKYFQNKDDQYPINIDVNCSEKGTYTCLKCNETFSSHLLWSVHDRYCPIQEKVDEVQKDSTTETNTLEVTLQSNTLNRNDVDTNTVIHNKNIQHVSHELPNNKRVEEPDTIRIVPVNEELRNNEKDMEIIEEPNIIEENLKINENDENFFGRKTIFIVENIGISKELQKPTKHPQTVNPPIVNNSIISDQDTTSVYSLQSNSTESNVKTYPCDICGKRFQNQKNLEQHIRSFSRVTEFCPLCNTAFSSKRYLQSHIAAAHVPQLSKNYDFHCVFCNQGFVKKYDLRPHVLHLHGRQMLETIMPNFRNTPGKDDESNNGNATCSVCNLAFETLDRYVEHRMYYYKNHKFTCSICSKDFEGMYMYHHHNKLNHYPEDKRKSYIYTCNICKEGFNHELHFYSHNMHVHPDEANSAEIVQQSTRYAQSVNNMEGDEQVIDLSMNQQNKAQLSSTDYICQICQFKCKNADDLKSHKLFYANDGDFKCNLCNRLCRTRNVLDQHKSFTHICRDVYNEHMCQRCNEILPSITSLRCHEKHFHANLVSYSNTNNCKYCGQTFSSSTECKEHQCKSTSSKTKEKYIYRCFYCDMKFVSLETIHKHILQAHFSKIFVKHVASNLELPSVSNDKIQKKTILDLVDQVVVSRKNIIQSFQQSCNGQNSISIMQDTQDKVAIEPTPEALKALFLIDVEPKQKTLNSTSTINGSEATTMNCNITTTREVEQNNQSKAITPVPTSTESTDISTKNHSLSDSFNISLEQMLDGHSIFSTGSADKSKATFTNVPPKSSNISNTPVTAAPIPRNEEIILQNCVSVNNTTDYSCPLCPLQYPSLMYFHAHLRYAHSDLIRNDLIYPQLDQLSEKIPVIECLLCPRISTDEKRYKRHLRHSHSSHMYLTNFKETKKIVDASSSLTTQTNSNNKTITPEVITVEDDDDDGKNSLVERAAAETAVEKTTCAPSTGNENVGKLKVKSFAKIIENLAIDRAKELLNKPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -