Basic Information

Insect: Harpegnathos saltator
Gene Symbol: RREB1
Assembly: GCA_003227715.1
Location: NW:416247-443929[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 5.4 3.4e+02 1.5 0.1 1 9 127 135 127 140 0.86

2 13 0.036 2.3 8.3 0.0 1 20 238 258 238 259 0.94

3 13 0.0059 0.38 10.8 4.1 2 23 268 290 268 290 0.96

4 13 0.021 1.3 9.0 0.2 1 23 522 544 522 544 0.97

5 13 5.6e-05 0.0036 17.1 1.4 1 23 555 577 555 577 0.98

6 13 0.002 0.13 12.3 3.3 1 23 583 606 583 606 0.97

7 13 0.054 3.4 7.7 1.1 1 23 990 1013 990 1013 0.95

8 13 0.00039 0.025 14.5 0.1 3 23 1292 1312 1290 1312 0.97

9 13 0.52 34 4.6 11.9 1 23 1318 1341 1318 1341 0.97

10 13 0.0033 0.21 11.6 2.2 1 23 1381 1405 1381 1405 0.97

11 13 2.3 1.4e+02 2.6 6.7 1 23 1484 1507 1484 1507 0.95

12 13 0.0089 0.57 10.2 0.4 2 23 1556 1577 1555 1577 0.94

13 13 0.6 38 4.4 8.4 1 23 1583 1605 1583 1605 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	5.4	3.4e+02	1.5	0.1	1	9	127	135	127	140	0.86
2	13	0.036	2.3	8.3	0.0	1	20	238	258	238	259	0.94
3	13	0.0059	0.38	10.8	4.1	2	23	268	290	268	290	0.96
4	13	0.021	1.3	9.0	0.2	1	23	522	544	522	544	0.97
5	13	5.6e-05	0.0036	17.1	1.4	1	23	555	577	555	577	0.98
6	13	0.002	0.13	12.3	3.3	1	23	583	606	583	606	0.97
7	13	0.054	3.4	7.7	1.1	1	23	990	1013	990	1013	0.95
8	13	0.00039	0.025	14.5	0.1	3	23	1292	1312	1290	1312	0.97
9	13	0.52	34	4.6	11.9	1	23	1318	1341	1318	1341	0.97
10	13	0.0033	0.21	11.6	2.2	1	23	1381	1405	1381	1405	0.97
11	13	2.3	1.4e+02	2.6	6.7	1	23	1484	1507	1484	1507	0.95
12	13	0.0089	0.57	10.2	0.4	2	23	1556	1577	1555	1577	0.94
13	13	0.6	38	4.4	8.4	1	23	1583	1605	1583	1605	0.99

Sequence Information

Coding Sequence: ATGGACGGatgtcggcggcggcggcggcgggagaaCAAGGGAGACGCGTCCATGGGCGAGAAAGAAGTCCaagagcgggggagagaggaggcggaggcgaAGAAGGAATTGGCGATCATGAGCGGGACACGTCCGAGCGAGATAAGCGGAGCAAGAGGAAAGAACGAGCTCGAGGTGACGGACACCCAAAACGGACCCGACCAAGAGCAAGAGAATGAAACGCAGAGCGATGCTGCGTCGCCGTCATCGAGTATTGAACTGGTGGAGAGCGCGCGCCCATGCTCGACATGTCCGTCGATGCTCTCGAATTCTCGCGAGCTGAATCACCAACGCGAGCACAATTCACCTCGCAGCACGGACTGCAGCGGCGAGGAAGACTATAGTTGCGGCAAATGCAACAAAGTCCTAGTACCATCCAACGACGAGCGGCCAGTTCATCGGACACTGTCGCCCAACAGTTGCACAGACTCTGAAGGAGGCAGCAGCGGCTCGGACAGACCAGCGGCAAGTGTCCGAGACGAGTACAACAGCAACGAGCTGGCTAGCGGTAACTCGCCAGAGTCGCTCGAGCGGCAGGAAGCGTCACCTAGCGGCCGCACGACGAACAAACGAAAGTGTCCGGACAGCGAGGTAGACGAGACGGAGAGTCAAAGGAGGGACAGCAAGATTCTTCTGAACAACTTCAAGATGGTGATCAGGTTGGACGAGGGCTTCACTTGCCCGGTCTGCGGGCGGCAGGACTTCGCGACAAGCGCGTTGCTGCAAACTCACCTGGAGTGCCTCCACCCGGAGTTCCCAGCCAAGTGCGAGGTCTGCAACCTTACGTTCAAGAACCATCGTACGCTGAATCTGCACCGCAGCATGAAGCACTTCAGCGAGAATACAACTGGCACGAACAGTCGGGGCGCGCGCAACTACGTGGACGGCTTCAACGATTGCACGTTCGTCGACTTCTCGTCCACTAAGTTCCCGACGATCGCGCGGGCGGTGTGCGAGCGGGAACCGCATCGGCCAGCTTCAGGTGAGGCCAACAAGTTCCAGTGCATGAAGTGCCTCCGCGCGTTCCCATGCAGCCAAGCTCACCTGGCCCACGAGGAGGAATGCAAAGGTCCATATGAGAACAAAAGGACCAATAAtgacaacaataacaataataacatcAGCACCAATAATAACCTCGACACGGACCTGGATCTTGCGAGTCCACCGGCGGACGACCTGAAAGTCAAGCGCGAGACCTTCTTCGCGACTTTGGACCTGCAGAACAACTCGACGGCGCACGAGGTACTGAAAGAGCGCAAAGAACGTGTAAAAGAGCCTACAACGAACGACGTGAAAGAGCCGAAGGACCTGGCGGATATCCAGAGCATCATTCTGACCGTCGCCAACAACGCGCCCATGTCGTTCCCGCGCTCCGACGCGAGTACGCCGGAGAACAACGTCAAGTTCAACCCGAGCGTCGGCTCTTCCGGCTCGTCGGGCACTTGCTCGTCCGAATACACTGAGGAGGAAGGTCATGAGTCcttcgccgcggaatttcgCAAAATGAAGCTGAAGGGCGAGTTCCCTTGCAAGTTGTGTACGGAGGTGCTGCGCAACTTGCGAGCGCTCAAGGGCCACAATCGCGTGCACATCAAGCATGCTGGCGATTACGGCTTGCCGTATCCTTGCAACATGTGCTCCTACACCAGTACTGACAAGACGACGCTGCAGAGGCACGTAAGGTCTCACAACGGCGACCGGCCGTTCGAGTGCTCGCTCTGCAACTACGCTTTCACCACTAAAGCGAACTGCGAGAGGCACGTAAAGAAGACGCACAATATGTGCAGCAAGGAGGACATTCAAAACGCGCTCATCTACCACCCGAACGAGGACTCGACCAACGACAACGTCGTCGGCAGGAGCTCGCCCCGAGCCAACCGGGAGGACGCACGGAAGACGTTGGTTTACCCGAGCGAACACGAAGAGGCTGTTTTCCAACACCACCAACAACAGCCTTACACGACGGACTGCAGAAATCCAGGTCCATCCGCATTAGCGGTGACGACGCGCTCTGACAAGCCGGAACCCCTGAATCTCGTGAAGAAGGACACCCCGGACCTGATCATGCTGCAACTGCCGCTGATGAACGTCAATTGCTCGCGAGCGGACGAAGACGCTGAGTCGAGATCGTCGGATGGCAGCGTATCTCTAGTCAGTGATACCAGGCCAGACCAAAGAATTCAAGCTAGTCCGATGAATCTGTCGAAGCCGTCCACGAGCGGCGCTCACTTTGTACCAGCCGCGAGTGGGTCCGAAGATAGTCCGCTAGACTTGTCTATGGACGTATTAGACTTGAGCAAGAAACGCAAGCGGGAGGGTGAGGCATCTGGCTCTTCTAGCGCAGAGGACTTGCAGCATAGCAGCAGGCAGAGAGAGATGTACAATGTCACCAGCCACGCGTTGTTCCTCACGCATGCTCTTATGAgcaacgccgccgccgcgcagaACTCCGTGCCGACGTCACTCGAAAGCTTCTACGCCAACACTCGTTCCCTCATTTACCGTAACTTGGGCACTTTGACAGCCGGCGCGGTCGGCGCCAGCATGATACCGCCGTACTTACTCAACCCGCAAATGCTAAACCACGGGTTGGCGGTGAACGGCAGCAAATTGCAAAGGGACCTGGTGCGAGGCCTGCAGCTGACCGGCGGTGGCACCATGGTGGACCACTCTTTGCCTAGCACGAGTTACGCGGTGCATTCTCAGGTGAGCGGCAACACTGGCACTCCGCAGCCCCCGAGCGAGCCGAACGGGTACCCGAGTCCGAATGCACAGGTCGCAGCCACTCAACAGCAGTCGACGACTTCGCGTCAATTAACACGACGAGCCGAGAACGTGCCGTCCAACAACTCGGTGAAGATGGTGCTAAAAGACGGCATATTGGTGCCCAAGCAGAAGCAACGCAGATACCGCACCGAGCGACCGTTCTTCTGCGCAATTTGCTATGCGCGTTTCACCCTGAGGAGCAACATGGACCGACACGTGAAGCAGCAGCATCCTCAGCGTTGGTGCCAAAAGAAGGCCCGTGGAGGCCACTCAGCCAGAGGTAGACCTCCTGCGAATCACGCAGCTAACATGTCTGTACAGAATCCGGACGTCGTTCCGGAAGACGTTGGCTCGCCGAGCCCGCAGGTGGCTCAGTTGAACGCGAACACGCCGCGCACCGAGTCGCCGATGACCTCGACGGAGCACAGCCGGCACTCCATCTCCGACCAAGTGAAATACGCGATTCTGGCGCAGCAGTTGAAAGCCAGCAAGATGGATGACAACGACTCGGAACAGGAGATGGTGATAGACGAGGGCTCGGCCGACCGGGAGCCGCAGGAGTCGCAAGCTCAGCAAGAACCCAACGCGAGCTTGTTGAGGGGCCAGTTGGAGGGCAACGAAGGTGTCAAAGACGTTGTCGTGAAAATGGAGGCAGAGGAATCTGTGGAAGGCACATTGGATGAGTCTCACAGTGAGCAGATCACACCCTCTGACGTCGATAAGATCAAGAAGGAGGAACTGCCGACCGTGGACAGCAAAGAGACATATAGCGAAGACGCGATGAAGACGCAAACCACTGGAGGCGAACAGGGCAAACTGGAAGACGGCACAGCAGACTTGGCGAGCGTGTCGAAGCTCCTGGACAACGCTTCGCAACAATATCAACAATTTAAGCCGCAGTACTTAAGCGATGAGGAGGGTTTGATGGCCTCGACCAGCGATTACAACAATTCGGGCAGCGAGAAATCGGATTCGCTTAATTCGCTCAACTCTGAGGCTTCATCGAgcaagaagagaaagaagaagaaaaagtccGCTTACTCGATGGCGCCAAACAGGGTGATCTGCCCGTATTGCCAACGCCCGTTTCCGTGGACTTCATCGCTGAGACGGCATATTCTCACACACACAGGCCAGAAGCCATACCAATGCAATCACTGTTCACATCACTTCACCACCAAATCCAACTGCGACCGTCACTTACTGAGGAAGCACAAGACGAAGGCGAACAAGACTCGCCGTGTTCGAAATTCCACGTCGCCGGAGGTCGAGCAGGTAGTCGTCAATAGCAACAGCAACACGTTCACAACGAGGAACGTGCCCGAGAGACCGTATAAATGCAACCAGTGCCCGAGCTCGACGTTCTCCACGTTGGGCAACCTCAAGAAACATCGCTCAACGAAGCACGCGCTTCGCAAGACCAAGTCGAGGTCGGACAcgccgtctagcgaccaacaGAACAGCCCGCCGCAGTCGTCCGCGCAGAACGACCAAAGCGACTACGAGAGTCGGTCGTCTAGTGTCTCCGAGAACACTGACAATTCTCCGTCCGCCACAAAGTCGAACCCTACCACGTCTCCGTCGATAAATCACGAAACCACCAGGTCCCGTAAGTCATCCCCGACACCGGTCGATGTGCCCTTCAAATGTCACCTGTGCGACAGCTGCTTCACAGAGCGCCAAGATTGTCTGGAGCATATCAAGGTGAATCACAAGCGTTCATATGAGATGTTAGTGGCCAAGGGCGCATTGGACATGGACATAGACGCGTCTGAGGACCAAATGCTAGCTCAACAACATTCCAGCGACGGTGAAGGGAAAGGCGGTCGTTTCCACGACTATAGTAACAGAAAGGTTGTATGTGCATTCTGCATGAGACGATTCTGGTCCGCGGAGGACCTTAGGCGGCACATGAGAACCCACACTGGCGAGAGGCCCTTCCAATGCGACATCTGCTGCAGGAAGTTCACCTTAAAGCACAGCATGCTGCGTCACCGCAAGAAGCACGAGTCCGTCGACTCGTCCATGTACATAGCTAATAGCGGCGACGAGGAAAACCCGCCTACGCAGCCACCGACGATAACCCCGAGGAGCCAACAACATTCGCCGGTACCAACCAATACCAGCAGACCCCGAACTCAAGACAGAATCTCCCTGCCGACTGTCGCGGCAGTCGCGACCGCGGATGCGGCGCCCTGCGCGCTTATGCGGTACAATCACTACGATAATATGGCCACTTTGACCGGCAGAATGGCGAACGATGGCTCCCAAAACGCTGCGCACCCTCCCCTTCGCTCCACGCCTCCGCCCGCGGAGGCGTCGGGCGAAAGTGGCGAGAATGATCTGATCTCCGACTTGCTGGGGATACGCGAAAAGGGTCTACTCGACAAGGTTCTTCTCAGCACGGCGGACGACGCGGCGAAATTGTTGGGTGTCAATCGTAACGAGTGA
Protein Sequence: MDGCRRRRRRENKGDASMGEKEVQERGREEAEAKKELAIMSGTRPSEISGARGKNELEVTDTQNGPDQEQENETQSDAASPSSSIELVESARPCSTCPSMLSNSRELNHQREHNSPRSTDCSGEEDYSCGKCNKVLVPSNDERPVHRTLSPNSCTDSEGGSSGSDRPAASVRDEYNSNELASGNSPESLERQEASPSGRTTNKRKCPDSEVDETESQRRDSKILLNNFKMVIRLDEGFTCPVCGRQDFATSALLQTHLECLHPEFPAKCEVCNLTFKNHRTLNLHRSMKHFSENTTGTNSRGARNYVDGFNDCTFVDFSSTKFPTIARAVCEREPHRPASGEANKFQCMKCLRAFPCSQAHLAHEEECKGPYENKRTNNDNNNNNNISTNNNLDTDLDLASPPADDLKVKRETFFATLDLQNNSTAHEVLKERKERVKEPTTNDVKEPKDLADIQSIILTVANNAPMSFPRSDASTPENNVKFNPSVGSSGSSGTCSSEYTEEEGHESFAAEFRKMKLKGEFPCKLCTEVLRNLRALKGHNRVHIKHAGDYGLPYPCNMCSYTSTDKTTLQRHVRSHNGDRPFECSLCNYAFTTKANCERHVKKTHNMCSKEDIQNALIYHPNEDSTNDNVVGRSSPRANREDARKTLVYPSEHEEAVFQHHQQQPYTTDCRNPGPSALAVTTRSDKPEPLNLVKKDTPDLIMLQLPLMNVNCSRADEDAESRSSDGSVSLVSDTRPDQRIQASPMNLSKPSTSGAHFVPAASGSEDSPLDLSMDVLDLSKKRKREGEASGSSSAEDLQHSSRQREMYNVTSHALFLTHALMSNAAAAQNSVPTSLESFYANTRSLIYRNLGTLTAGAVGASMIPPYLLNPQMLNHGLAVNGSKLQRDLVRGLQLTGGGTMVDHSLPSTSYAVHSQVSGNTGTPQPPSEPNGYPSPNAQVAATQQQSTTSRQLTRRAENVPSNNSVKMVLKDGILVPKQKQRRYRTERPFFCAICYARFTLRSNMDRHVKQQHPQRWCQKKARGGHSARGRPPANHAANMSVQNPDVVPEDVGSPSPQVAQLNANTPRTESPMTSTEHSRHSISDQVKYAILAQQLKASKMDDNDSEQEMVIDEGSADREPQESQAQQEPNASLLRGQLEGNEGVKDVVVKMEAEESVEGTLDESHSEQITPSDVDKIKKEELPTVDSKETYSEDAMKTQTTGGEQGKLEDGTADLASVSKLLDNASQQYQQFKPQYLSDEEGLMASTSDYNNSGSEKSDSLNSLNSEASSSKKRKKKKKSAYSMAPNRVICPYCQRPFPWTSSLRRHILTHTGQKPYQCNHCSHHFTTKSNCDRHLLRKHKTKANKTRRVRNSTSPEVEQVVVNSNSNTFTTRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHALRKTKSRSDTPSSDQQNSPPQSSAQNDQSDYESRSSSVSENTDNSPSATKSNPTTSPSINHETTRSRKSSPTPVDVPFKCHLCDSCFTERQDCLEHIKVNHKRSYEMLVAKGALDMDIDASEDQMLAQQHSSDGEGKGGRFHDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFQCDICCRKFTLKHSMLRHRKKHESVDSSMYIANSGDEENPPTQPPTITPRSQQHSPVPTNTSRPRTQDRISLPTVAAVATADAAPCALMRYNHYDNMATLTGRMANDGSQNAAHPPLRSTPPPAEASGESGENDLISDLLGIREKGLLDKVLLSTADDAAKLLGVNRNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01087470;
90% Identity: -
80% Identity: -