Hsal008233.1
Basic Information
- Insect
- Harpegnathos saltator
- Gene Symbol
- ZFY
- Assembly
- GCA_003227715.1
- Location
- NW:410613-459627[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 8.3 5.3e+02 0.9 0.4 2 23 453 473 452 473 0.85 2 13 0.002 0.13 12.3 0.4 2 21 586 605 585 609 0.89 3 13 0.031 2 8.5 1.7 2 23 624 646 623 646 0.94 4 13 0.068 4.4 7.4 3.9 1 23 723 747 723 747 0.93 5 13 2.1 1.3e+02 2.8 6.0 2 23 767 789 767 789 0.94 6 13 0.086 5.5 7.1 0.2 1 21 794 814 794 815 0.95 7 13 5e-05 0.0032 17.3 0.3 1 23 876 897 876 897 0.98 8 13 0.0007 0.045 13.7 0.1 1 21 903 923 903 924 0.95 9 13 2e-06 0.00013 21.7 1.2 1 23 943 965 943 965 0.97 10 13 0.01 0.67 10.0 0.0 1 23 970 995 970 995 0.96 11 13 2.7e-05 0.0018 18.1 0.5 1 23 1002 1024 1002 1024 0.98 12 13 0.01 0.66 10.0 4.7 1 23 1036 1060 1036 1060 0.97 13 13 0.0017 0.11 12.5 3.7 1 21 1066 1086 1066 1091 0.94
Sequence Information
- Coding Sequence
- ATGGAGACCTTcgaggacgacgatgacacGCACTTCTGCATCAAGTGTAACCTGACGATACACGGCCTCGATAATTACGTACGGCATCGTCAGTCGGGCTGTCGTCCACCCGACGACAAGAACGACACCGTCCACGAGTCGCcgtcgacgccgacgacggTGTCCTATCCCGAGATTCTAAACGCCGACGCGTTCTTCAACTCGCTGGAGTTGCAGAGCAGCAAGTCGAACCCGCGGCGGGCGCCGAGTCCGTTGGACAACGTTGGCAGAAAGTATAAGAAAGGCGagcggaagaagaagagccAGAAGAGCGTGCAGGTGGTGGACGCCGACGAGGCTGGCGCCAAGGACAAACTCCACAGCATGTTACCCGCCGTCAGCGACCTGGACGACCCGGTTCACCTGTGCATCCAGTCGCTAGTGTTCCCCGACATCGCCTCGACGATCTCGTTGACCGGCAAGACCCCTGCGACCGTTACGCAGGGCAAACTGACGCAATCGATGTCACAAGCCGGCTCGAACATGGACGCCGCGAACTTCCCGATCAAGCACGAGCCGGAAACGTCGCTGGAGATTCTAATGACCGACACGAAGCAGACCGAACGGAAGAGGCAGGAGAATCCCCAGCGAATAGAGTCCGATCACCAGACCTGGCTGGAAGACCCGATCCTCGCCGACCTTATCTtgggaaacagcgagaacaaGGAGCTGACTAGATACGACTTCGAGTACCAGCAGGACGACGACTCGGAGGACGACATGCTGGACGACGACTCGGCGGGGGAGGACGACTCTTACTCGGACTCCGACGACGGCGAAAATCGGGAGCGTCCATCGCGAGCTCACACCGGCGGCAAGCGGAAGCCTGAGCTCGGCGATTTGCCGCAGGACATGCCGCATATGCATGAGGAGGACGTGGATCCTGAGGACGACCATCAGGAACATCCCCCGCCGACGTATACCGGCGGAAAATGGAAGCCCGCGGAGACGTCGCAGAAGATCGAGGAATACGAGAGCAAGGACACATCCGGACAGCCGCCGCCGGGACACACGCGAGGGAAATGGATACCGGGTGCACGGACGGATATCGAATCGGGATATTGGTGCAATCCTTGCGGCAGGAAGCTCGCCTCACGACTGGTCTACAACAGGCATCTGCTCTCTGATTTGCACGCTAGAAGGAGCATTAGAGAGATCGACGACGGTGTCCATCTAGCGCGCGGGATGGCTTCGTGCGCGAATAGAAGAGTGTCCGCTCGCAGGAAGGCTTCGCTCGCAACGAAaccgacggaggaggaggagcccGAGCGAAAGGAAGGCAAGAAACGTGTGCGCAGACGGGAGAAGGAGTTCGTCTCGTGCGAGATGTGCCGCACGCGCGTGAGGAGGCCTCAAATGGGTAAACATTTGCTCTCCCATTACCATTGCCGCGTGGCAGGAATGAATCCTTGCAGCCCGCGCGCACGTCGCTTCCTGCTGGAGAACATGGCGAATGTGGTCCGCCAGTGCTCCTTCCAATGCGCCCCTTGTCGTTTTTACTGCAACACCGAGGAGACCTTCCTGCTTCACTGGCGTTCTGATCTCCACATCAGTACCTTGGAACGGATCGGCGGCAATTGCAAATGCACTCCGTGCAACTTTTGGTGCGAAGACAACGGCATGATGGAGTCTCACCTTCTGAGCGCGAGTCATCGCGAAGTGGTGTCCATGATGAACGGCTCCGTGCCGGTAGTAATTAGTCGCCGACGGAGCCTGCCCTGCGGCACTTGCGGCCGGCAATTTCGATACAACTTCCAGCTGCGGATGCATGCCAAGGAGACGGGCCACGAGCCGAGCTTCAGCGCGTCGGACGAGTATCAGCAACGCATTCGGTGCGATATGTGCCCGAAGATTGTGCACTCTCTGATCTCGCTGCAGCGTCATCAGCTGCACTATCACGTCGTCAAGGACGACGAGGGAAAGAGCAaagacgcgacgacgacgatgacgacgacgacgacgacgacgacgacgacgacgacgacgacgatgatgacgacgacgacgatgacagcggcggcgacggcgatgacgacgacggcgatgacgacaacgacaacgacgacgacgacaacgacgacgacggtggcgacagcggcagcggcggtggtcGCGCGACCGGCGCCGTACTTCTGCTCGTTCTGCTCCATGAACTTCACCACCACCCACGAAGCGATCCGACATCGGAGAACTTCCAGTCACAAGGAGGCCGTAAAAGCCCGCAAAAATCCGGGAGGATCGTCGCCTGCTACGACGCGGGAATGCCCTCACTGCAACGAGAGGTGTCCGGATCTCCTGGCCTACAAGAATCATCTTCTCCATTGTCATCCGGAACTGTGCCACAGATGTCCCCGCTGCGGCGTACTCTTCGCCCTGTCGCAAGAAGTCACGAGGCACACGCGAGAAGGCAACTGCAGCAGGGACGACGAAACGAGCATGGCGCAGACGGAGGCCGAGAAGGAAGGATGGAAATGCAAGGACTGCGTGTTCTTCACGGATTCTCAAGCCGAGTACGTCTTTCACGAGGCTCTCCATGCCGGCGCCGTCGAGGCGGACGACGCAGCTGCCGAGAAGCTGCCGGCGAAATATCAGTGTCCGATTTGTAAGAAGGCCCTGAGGAAAGCCTCGCTGCGGATCCACATCAGACAGCACACCGGGGAGAGGCCGTTCCCCTGCGCAAAGTGCTCCGTGTCGTTCCCCAAGAGGTCGGACCTCAACGCCCACCGGAAGGTGTGCGGCacttcgtcgtcgccgcggtgCCTGGACAAGAGCGGCCGGCAGCGGAACTTTGCCTGCTCGGACTGCAAAGAGAGCTTCTACACCAAGTACGCCCTTCAGCAGCACATGTTGCGGCACTTTGGTAAAAAGTACAAGTGCGGACTTCCGGGCTGCCCGACGGTCCTCCGCACCGCGGCCGAGCTCGACAGGCACCGAAAGCTGACCCACGACGTCGTCGAGAAGCAGTACTCCTGTCCCGACTGCCCGTACGCcgcgaagacgaagacgcAGTTGCGCAGGCATAGAGCGAAGCACGAGGATCCCGCGAGCGCGGAGGAACGGCGGATCCACCGCTGCACTTTCGCCGGCTGCAATTTCAAGACGAAAGTCAGCTCCCACTTGCAGAGACACGTGCGGCTGCACACGGGCTCGAAACCGTACAAGTGCCGGCACTGCTCCTACGTTTGCAACAATCTGGAGAACCTCCGGAGGCACGTGCTGTCGACGAATCTACATCCCGGCGAGACGATCTACGAGTGCAGCTTGTGCGACGACGGCGCCACGACGTCGGGGCCGTTCCGCACGAACTTCGCCAAGGAACTCCGCGCTCACCTGTCGGAAGCTCACGCCGATCACTTCCCGACGCCCGACCTCGCGCACAAGTACGTCCTCGAGCTCTTTTCCGCCGGCCCGAACTCGTCCGATTGA
- Protein Sequence
- METFEDDDDTHFCIKCNLTIHGLDNYVRHRQSGCRPPDDKNDTVHESPSTPTTVSYPEILNADAFFNSLELQSSKSNPRRAPSPLDNVGRKYKKGERKKKSQKSVQVVDADEAGAKDKLHSMLPAVSDLDDPVHLCIQSLVFPDIASTISLTGKTPATVTQGKLTQSMSQAGSNMDAANFPIKHEPETSLEILMTDTKQTERKRQENPQRIESDHQTWLEDPILADLILGNSENKELTRYDFEYQQDDDSEDDMLDDDSAGEDDSYSDSDDGENRERPSRAHTGGKRKPELGDLPQDMPHMHEEDVDPEDDHQEHPPPTYTGGKWKPAETSQKIEEYESKDTSGQPPPGHTRGKWIPGARTDIESGYWCNPCGRKLASRLVYNRHLLSDLHARRSIREIDDGVHLARGMASCANRRVSARRKASLATKPTEEEEPERKEGKKRVRRREKEFVSCEMCRTRVRRPQMGKHLLSHYHCRVAGMNPCSPRARRFLLENMANVVRQCSFQCAPCRFYCNTEETFLLHWRSDLHISTLERIGGNCKCTPCNFWCEDNGMMESHLLSASHREVVSMMNGSVPVVISRRRSLPCGTCGRQFRYNFQLRMHAKETGHEPSFSASDEYQQRIRCDMCPKIVHSLISLQRHQLHYHVVKDDEGKSKDATTTMTTTTTTTTTTTTTTMMTTTTMTAAATAMTTTAMTTTTTTTTTTTTTVATAAAAVVARPAPYFCSFCSMNFTTTHEAIRHRRTSSHKEAVKARKNPGGSSPATTRECPHCNERCPDLLAYKNHLLHCHPELCHRCPRCGVLFALSQEVTRHTREGNCSRDDETSMAQTEAEKEGWKCKDCVFFTDSQAEYVFHEALHAGAVEADDAAAEKLPAKYQCPICKKALRKASLRIHIRQHTGERPFPCAKCSVSFPKRSDLNAHRKVCGTSSSPRCLDKSGRQRNFACSDCKESFYTKYALQQHMLRHFGKKYKCGLPGCPTVLRTAAELDRHRKLTHDVVEKQYSCPDCPYAAKTKTQLRRHRAKHEDPASAEERRIHRCTFAGCNFKTKVSSHLQRHVRLHTGSKPYKCRHCSYVCNNLENLRRHVLSTNLHPGETIYECSLCDDGATTSGPFRTNFAKELRAHLSEAHADHFPTPDLAHKYVLELFSAGPNSSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01087466;
- 90% Identity
- -
- 80% Identity
- -