Hsal011451.1
Basic Information
- Insect
- Harpegnathos saltator
- Gene Symbol
- ZFY
- Assembly
- GCA_003227715.1
- Location
- NW:62902-68306[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0023 0.15 12.1 0.1 1 20 3 22 3 24 0.94 2 21 0.025 1.6 8.8 2.4 3 23 33 53 32 53 0.97 3 21 3.1 2e+02 2.2 1.4 1 14 90 103 90 109 0.82 4 21 0.00082 0.052 13.5 2.5 1 22 118 139 118 139 0.96 5 21 0.017 1.1 9.4 4.5 1 22 180 201 180 205 0.92 6 21 0.0022 0.14 12.1 5.0 1 23 208 231 208 231 0.96 7 21 0.0043 0.27 11.2 0.2 1 20 268 287 268 289 0.95 8 21 0.0004 0.026 14.4 2.6 3 23 298 319 296 319 0.95 9 21 0.0017 0.11 12.5 5.1 1 23 359 382 359 382 0.97 10 21 0.00014 0.0089 15.9 1.5 1 21 387 407 387 412 0.94 11 21 0.024 1.5 8.8 0.1 1 19 451 469 451 471 0.95 12 21 0.0048 0.31 11.0 1.9 3 23 481 502 479 503 0.95 13 21 0.0003 0.019 14.8 1.6 1 23 541 564 541 564 0.98 14 21 0.0027 0.17 11.8 1.1 1 21 569 589 569 592 0.95 15 21 0.0076 0.49 10.4 0.0 1 20 631 650 631 652 0.94 16 21 0.0022 0.14 12.1 2.1 3 23 661 682 659 683 0.95 17 21 0.00042 0.027 14.4 2.4 1 23 721 744 721 744 0.97 18 21 0.00055 0.035 14.0 3.1 1 21 749 769 749 772 0.95 19 21 0.58 37 4.5 0.2 6 17 793 804 793 805 0.88 20 21 0.012 0.74 9.9 2.5 1 23 811 834 811 834 0.97 21 21 1.9e-05 0.0012 18.6 0.7 1 23 839 862 839 862 0.98
Sequence Information
- Coding Sequence
- ATGACATACCAATGTGAGATCTGCGAACGAAGCTTTTGTCTTGAGATAGATTTAATACAACACGTCATAGAAGTCTTCGAACGAGGCACAGAGATATGCAGCCACTgcaactatgaaaccaatgaTAAGGAAGACATAAAGAACCACATACATGTTCATCTTAACATCCAGGATGAAAGTAATAGTGCGGAGCCAGAACCGTCCTTGGAGAGTGACTTGTGCGTCAAAAATTTTACCACAAgcaaagaaattaaaaagatCAAAATTTACGAATGTTATCTGTGCAACCGAAGGTTCCTAAGAAAGTATGGATTCATATTTCACTACTGGAAGGACCACAAACATTTAACGCACCAATGTCTACATTGCGATTACAAAACCAACGATACGGAAAATCTGAAGAACCACATACGACGTGTTCAGTCTAACAGCCAGGAGGGAAGCAACAGTGCGGAGCCGACACCATCTTTGGAGAGTGATGCGTGCGGCAAACATTCCAGCAGAAGCAGGGACATTGAAAAGcgcaagaatatattttacgaaTGTCATGTTTGCAACCAAAGGTTCTCTAGAATGTATGAATTGATATGTCACTACAGGAAGGTCCAAAAACATTTAAAGCACCAATGTGAACATTGCGACTACAAAACCACCGATACGGAAGATCTGAGGAGTCATATACAACATGATCATCCTAATATCCAGGAGGACTATGATAGTGCGGAGCCAGTACCGTCTTTGGTCAGTGATCCGTGCAGCAAATATTTCAGCAGAAGCAGCGACATTAAAAAGAATATCCTTTACCAATGTGAGATCTGCGAACGAAGCTTTTATTGCGAGGCAGATTTAATACAGCACATGATAGAGGTCGTTGAACGTGGCACAGATATATGCAGTCACTGCAACTACAAAACCGATGATAAGGAAAATTTGAAGATCCACATACGACATGTTCATCCTAACATCCAGGAAGAAAACAACAGTGAGGAGTCGGCATCGTCTTTGGAGAGTAATGCGTGCGGCAAACATTCCAGAAGCAGAAGCAGTGACATCGAAAAGTACAAGAATATGCTTTACGAATGTGATGTTTGCAACCAAAGGTTTTGTAGAAAGTATGAATTGATATGTCACTACAGGATGGTCcacaaaaatttaatgcaTGAATGTGAACATTGCGACTACGAAACCATCGATAAGGAAGATCTGAAGCGCCACATACGATATATTTATACTCACATCCAGGATGAAATTCTGGATAATAGTGCGAAGCTGGAATCATCTATGGACCATTATCCGTGCGATGAACATTCCAGCAGAAGCAGCGACATTGAAAAGTGCAAGAATATGCTTTACCAATGTGAGGTCTGCgaacaaaaattttatttcgagatAGATTTAATGCAGCACGCCATAGAGGTCTTGGGACGTGGCACAGACATATGCAGCTACTGTAACTACGCAACCAATAATGAGAAAGATATGAAGGCCCACATACGACATGTTCATCATAATATCCAGGGAAAAAGCAACAGTGTGGAGCCAGAACCGCTTTTGGAGAGTATTCCGTGCGACAAACACTCCAGCAGAAACAGTGAAATTAAAAAGTACGAGAATATGCTTTACGAATGTGATGTTTGCATCCAAAGATTCGCTAGAAAGTATGAATTGATACATCACTACAGGAAGGTTCACAAACATTTAATGCATCAATGTGAGCTTTGCGGCTACGAAATCACCGATAAGGAAGATCTGAATAGCCACATACAATGCGTTCATCCTAATGTCCAGAAGGAAAGTAATAGTGCACAGCCGGGACCGTCCTGGGAGAGTGATCCGTGCGACGAACACTCTAACAGAAGCAGCGACATTGAAAAGTGCGAGGAAATGCTTTACCAATGTGAGGTTTGCGAACAAAGCTTTTATTTCGAGATAGATTTAATGCAGCACGCCATGGAAGTCTTGGGACGTGGCACAGATATATGCAGCTACTgcaactatgaaaccaataaTGAGAAAGATCTGAAGGTCCACATACGACATGTTCATCATAATATCCAGGGGGAAAACAACAGTGCGGAGCTGGAACCGTTGTTGGAGAGTGATCCGTGTAACAAACACTCCAGTAGAAGTAGTGACATCGAAAAGTACAAGAATATGCTTTACGAATGTGATGTTTGCAATCAAAGATTCCCTAGAAAGTATGATTTGATATGTCACTACAGGAAGGTCCACAAACATTTAATGTATCAATGTGAGCATTGCGATTACGAAACCACTGATAAGAAAGATCTGAATAGCCACATACAATGCATTCATCCTAATGTCCAGAAGGAAAGTAATAGTGCACAGCCGGAACCGTCTTGGGAGAGTGATCCCTGCGGCAAACATTTCAGCAGAAGTAGCGACATAAAAAAGTATAAGAATATGCTTTACGAATGTAAAGTTTGTAATCAAAGGCTCCCTAGAAAATATGAATTGATATGTCACTATAGGAAGGTGCacaaacatttattatatcaatGTGAACATTGCGACTACGAAACCATCGATAAGGAAGATCTGAGGAGTCACATACAACGTGCTCATCCTAACATTCAGGAGGAAAGTAATAATGCGGATCCGAGTCCGGCTTTGGTGTGTAAACTGTGCTGGAAACATTAG
- Protein Sequence
- MTYQCEICERSFCLEIDLIQHVIEVFERGTEICSHCNYETNDKEDIKNHIHVHLNIQDESNSAEPEPSLESDLCVKNFTTSKEIKKIKIYECYLCNRRFLRKYGFIFHYWKDHKHLTHQCLHCDYKTNDTENLKNHIRRVQSNSQEGSNSAEPTPSLESDACGKHSSRSRDIEKRKNIFYECHVCNQRFSRMYELICHYRKVQKHLKHQCEHCDYKTTDTEDLRSHIQHDHPNIQEDYDSAEPVPSLVSDPCSKYFSRSSDIKKNILYQCEICERSFYCEADLIQHMIEVVERGTDICSHCNYKTDDKENLKIHIRHVHPNIQEENNSEESASSLESNACGKHSRSRSSDIEKYKNMLYECDVCNQRFCRKYELICHYRMVHKNLMHECEHCDYETIDKEDLKRHIRYIYTHIQDEILDNSAKLESSMDHYPCDEHSSRSSDIEKCKNMLYQCEVCEQKFYFEIDLMQHAIEVLGRGTDICSYCNYATNNEKDMKAHIRHVHHNIQGKSNSVEPEPLLESIPCDKHSSRNSEIKKYENMLYECDVCIQRFARKYELIHHYRKVHKHLMHQCELCGYEITDKEDLNSHIQCVHPNVQKESNSAQPGPSWESDPCDEHSNRSSDIEKCEEMLYQCEVCEQSFYFEIDLMQHAMEVLGRGTDICSYCNYETNNEKDLKVHIRHVHHNIQGENNSAELEPLLESDPCNKHSSRSSDIEKYKNMLYECDVCNQRFPRKYDLICHYRKVHKHLMYQCEHCDYETTDKKDLNSHIQCIHPNVQKESNSAQPEPSWESDPCGKHFSRSSDIKKYKNMLYECKVCNQRLPRKYELICHYRKVHKHLLYQCEHCDYETIDKEDLRSHIQRAHPNIQEESNNADPSPALVCKLCWKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -