Basic Information

Insect: Harpegnathos saltator
Gene Symbol: ttk
Assembly: GCA_003227715.1
Location: NW:285084-314307[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.6 1.1e+02 3.1 0.4 6 20 377 391 376 393 0.93

2 9 9.6e-07 6.2e-05 22.7 2.5 1 23 627 649 627 649 0.98

3 9 2.4e-05 0.0015 18.3 2.0 1 23 655 677 655 677 0.98

4 9 1.5e-06 9.4e-05 22.1 0.3 2 23 686 707 686 707 0.98

5 9 4.8e-05 0.0031 17.3 0.1 3 23 715 735 713 735 0.97

6 9 1.5e-07 9.8e-06 25.2 3.0 1 23 741 763 741 763 0.98

7 9 2.6e-06 0.00017 21.3 0.7 1 23 769 791 769 791 0.98

8 9 5.6e-05 0.0036 17.1 7.5 1 23 797 819 797 819 0.98

9 9 1.8e-05 0.0012 18.7 1.1 1 21 825 845 825 846 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.6	1.1e+02	3.1	0.4	6	20	377	391	376	393	0.93
2	9	9.6e-07	6.2e-05	22.7	2.5	1	23	627	649	627	649	0.98
3	9	2.4e-05	0.0015	18.3	2.0	1	23	655	677	655	677	0.98
4	9	1.5e-06	9.4e-05	22.1	0.3	2	23	686	707	686	707	0.98
5	9	4.8e-05	0.0031	17.3	0.1	3	23	715	735	713	735	0.97
6	9	1.5e-07	9.8e-06	25.2	3.0	1	23	741	763	741	763	0.98
7	9	2.6e-06	0.00017	21.3	0.7	1	23	769	791	769	791	0.98
8	9	5.6e-05	0.0036	17.1	7.5	1	23	797	819	797	819	0.98
9	9	1.8e-05	0.0012	18.7	1.1	1	21	825	845	825	846	0.94

Sequence Information

Coding Sequence: ATGATGGGAGAGGTGATTCGTGTTTCCGGGAGGGCGGCGGACGTCGGGGACTTCCTCAAGGAGGCCATGCTGTCACAGCGATTCGCGGATGTGGCCCTATGCTGTCCCGGAGGTCAAAGGTTCCTCGCGCATCGCCTGGTCCTGTCGGCCGCGAGCCCTTACTTACAGGAGGTACTGCTGGCGCACAGCAAATCCGCCGTTCATTGCGAGCCGATCACGGTGATTCTGGCGGAGGTGGAGGCGCCGGAACTCGCGGCACTCCTCGGCTTCGTGTACACCGGAAGCGCGACGGTGCCGCGAGTTCGACTGGATGCGTTTCTGCGCGCCGCCGAAGCCCTGCGCATTCAGCTGCCGCCGGTGCCAGTCGTGATGACGTGCAGAGCGGACCAGGCGGACTGCAAGCTGGAGGACGTCAAGGACGTCAAGGTCAGCCCCAAGTACTTGCAGTGCGACCAGTACCCATCGTCCGACAGGTGGTACCGATCGGCAAGGCTATCGTCGAGGCTACCCTACGAGGACTCGTACGATCGGAAAGAGTCCTGCGGCAGGGTATATCCTGCGCCGGAAAACAGCAGGGACATCCTCAGAGACACCAGGACGCTCCATGAGCTCGACAGTCCCGTCAGGTCGGCGTTCACGCCTACCTGCGCGAGCGCATGGCCAATCGGTGGCTTCGTGCAGCAAGACCGAACTATGGGAGAACCCGCAGCGGAGAAAGATCACATCTCGACGACAGGTAGACCGGCGCACGAGCGCCACGCCGACAAGAACCACGCGATCCCAGCGGTTCCCAGCGGTGGTGAGCCGCTCTTCAATGTGTACCAGTCGACCACGTGCCTTCCACCGGTCGGATCCGCTGCGGAAGGATACGCCGGGCTGGATCCGCTCGAGAGGATTCGCACGGGATACGAGAGGTTGCAGGTGATGAATTGCGTGACCGGCAAACCGACGGATGAAGACGCGAGCGCGGGTGGCTCGGGCGAGTTTTGCGGAAGAACACGGGACGATTACAGTCGCAGCGAGTGCCCCTACCCGAGCGGGATGCAGTCGTCGTCCTTGCAATGCGCCGCCGGTCGAACGAGGTCGTACGAGAGGCCCGATTACGGTCAGGCGGGCGAGGATCTCAGCTGCGGCGAAAGTTGTTGTAGGTGGAGGACCGCCCGCAGGCACGTGGCCAACCGCGTCACCGCGTCGCCGTGGCGCCAGATCATCAGGCCTCATCATTCACCGAGAACAAGGCCCGTCGAACGTCAGCTCGATGATATGGAGATGCAGAAGAAGCCGCCGACACCCGAACCACCACCACGGTCTACGATAATATCGATGAGCCCGAGGATCCAATCCCCCAGGAACGTGCCGCGAAACGATGGGGGGGGCCTCTACGCTTTCGAAGTTCCTATCAACTGCGAGACGAGCTTTAACGGCGACGCGAGACCGCGCGAGATGATCAGCGGCCCGGAGCCGAGGATCCAGGAGATCTATAGCTCCCCGCTTCCATTCGCGCCCTCCGGTCAGATCGCGCCGTTGAGGAGCAACGAGCCACTCTCTTTCCAGAATAGCAATACGTCCGCCCGACCGTTATCCACCGGCAATGACAATGTTATCACGAGCAAGAGCAGCGGAGGGTGCGGCGGATACGCGACCTCGCAACCAGCCCCGCAAACATCGACGAAGCCTGAACTGTCACATCCGATCAGCCGTTTGTGCGACACAATCGATACTGATGAAAGAGAGCAGAGAGTGCCCCCGGTGGAGACGGATGCGACGAGCGCAGAGAAGAACGTGGACGAGCGGATCTTCGTCAAcagcgacaacaacaacaacaccgAGACGATCGTTAACACAGAAGTGCCTCCTCGCGGGAAGTCCGTCGACGACCACAGGTGCGACCAGTGCGGGAAGACCTTCGTCACGAGGGCGTCGCTCAAGGTGCACAGCCGCACGCACTCCGGAGAGAAACCGTTCCGCTGTGCCGACTGCGGCAAGCAGTTCTCCCAGCTGCGCAACTACAAGTACCACCGCAGCGTGCACGAGGGCACGCGGGAGTTCGCGGCCACCTGTCCGGAATGCGGCAAGTACTTCAACGACCGCGGCTACCTGAGCTCGCACATGAAGATCCACCGGAACCGCAAGGAGTACGGCTGCGCGGAATGCGGCAAGAGCTTCAATCAGCGGGTCGCCTACAACATGCACGTGCGCATACACACGGGCGTGAAGCCGCACCAGTGCGAGCAGTGCGGCAAGGCGTTCTCGCGGAAGATGCTGCTGAAGCAGCATCTGCGGACGCACTCCGGCGAGCGGCCGTATCAATGCCAAGTCTGCCAGAAAGCGTTCGCCGACCGCTCCAACATGACTCTCCACACGAGGCTGCACTCCGGCCTCAAGCCGTACCAGTGCACCCTGTGCTCCAAGGCTTTCACCAAGAAGCACCACCTCAAGACCCACCTCAACTATCACACCGGCACCAAGCCGTACTCCTGCCCCAACTGCGGCCTCAGGTTCTCGCAGAGCAGCAACATGCGGACGCACTTCAAGAAGTGCAGCGTCAACAACCCCGTCGGCCAAGGCGCGGCCAAGGCGGCCCGCTGCGACGAGGTCGGGGACGCGGACGGCAACGCGGTGATGCCCCAGGTGATGGCCAGGAGTCCGGCGGACGCCTTGACGCCGCCTAATTCCGATCAAGAGTCCAGCATCCTCACGCCCATCTCGAAGAGCGTCGTCGCGATAGAGAGCAACGCGTAG
Protein Sequence: MMGEVIRVSGRAADVGDFLKEAMLSQRFADVALCCPGGQRFLAHRLVLSAASPYLQEVLLAHSKSAVHCEPITVILAEVEAPELAALLGFVYTGSATVPRVRLDAFLRAAEALRIQLPPVPVVMTCRADQADCKLEDVKDVKVSPKYLQCDQYPSSDRWYRSARLSSRLPYEDSYDRKESCGRVYPAPENSRDILRDTRTLHELDSPVRSAFTPTCASAWPIGGFVQQDRTMGEPAAEKDHISTTGRPAHERHADKNHAIPAVPSGGEPLFNVYQSTTCLPPVGSAAEGYAGLDPLERIRTGYERLQVMNCVTGKPTDEDASAGGSGEFCGRTRDDYSRSECPYPSGMQSSSLQCAAGRTRSYERPDYGQAGEDLSCGESCCRWRTARRHVANRVTASPWRQIIRPHHSPRTRPVERQLDDMEMQKKPPTPEPPPRSTIISMSPRIQSPRNVPRNDGGGLYAFEVPINCETSFNGDARPREMISGPEPRIQEIYSSPLPFAPSGQIAPLRSNEPLSFQNSNTSARPLSTGNDNVITSKSSGGCGGYATSQPAPQTSTKPELSHPISRLCDTIDTDEREQRVPPVETDATSAEKNVDERIFVNSDNNNNTETIVNTEVPPRGKSVDDHRCDQCGKTFVTRASLKVHSRTHSGEKPFRCADCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYGCAECGKSFNQRVAYNMHVRIHTGVKPHQCEQCGKAFSRKMLLKQHLRTHSGERPYQCQVCQKAFADRSNMTLHTRLHSGLKPYQCTLCSKAFTKKHHLKTHLNYHTGTKPYSCPNCGLRFSQSSNMRTHFKKCSVNNPVGQGAAKAARCDEVGDADGNAVMPQVMARSPADALTPPNSDQESSILTPISKSVVAIESNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01087391;
90% Identity: iTF_00769813;
80% Identity: iTF_00769813;