Basic Information

Insect: Harpegnathos saltator
Gene Symbol: -
Assembly: GCA_003227715.1
Location: NW:887517-898783[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.35 23 5.2 1.8 1 23 408 430 408 430 0.96

2 19 0.0067 0.43 10.6 0.5 2 23 461 482 460 482 0.97

3 19 0.025 1.6 8.8 1.3 1 23 552 575 552 575 0.93

4 19 0.00023 0.015 15.2 3.4 1 23 577 599 577 599 0.98

5 19 6.2e-05 0.004 17.0 0.5 2 23 655 676 654 676 0.97

6 19 4.6e-05 0.0029 17.4 1.8 1 23 684 706 684 706 0.95

7 19 0.00012 0.0074 16.1 1.7 1 22 712 733 712 736 0.91

8 19 4.7e-05 0.003 17.4 2.2 2 23 811 832 810 832 0.96

9 19 7.9e-05 0.0051 16.7 5.3 1 23 916 938 916 938 0.97

10 19 0.00041 0.026 14.4 1.5 1 20 943 962 943 964 0.94

11 19 0.032 2 8.5 0.2 2 23 975 996 975 996 0.98

12 19 2.6e-05 0.0017 18.2 0.6 2 23 1034 1055 1033 1055 0.97

13 19 5.5e-05 0.0035 17.2 2.0 1 23 1060 1082 1060 1082 0.94

14 19 0.00097 0.062 13.2 3.1 1 23 1088 1110 1088 1110 0.98

15 19 4.2e-06 0.00027 20.7 0.4 1 23 1125 1147 1125 1147 0.95

16 19 3.4e-07 2.2e-05 24.1 0.6 1 23 1153 1175 1153 1175 0.99

17 19 4.4e-05 0.0028 17.4 0.4 1 23 1181 1203 1181 1203 0.97

18 19 0.00098 0.062 13.2 4.6 1 23 1209 1231 1209 1231 0.96

19 19 0.0046 0.3 11.1 0.6 1 20 1237 1256 1237 1258 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.35	23	5.2	1.8	1	23	408	430	408	430	0.96
2	19	0.0067	0.43	10.6	0.5	2	23	461	482	460	482	0.97
3	19	0.025	1.6	8.8	1.3	1	23	552	575	552	575	0.93
4	19	0.00023	0.015	15.2	3.4	1	23	577	599	577	599	0.98
5	19	6.2e-05	0.004	17.0	0.5	2	23	655	676	654	676	0.97
6	19	4.6e-05	0.0029	17.4	1.8	1	23	684	706	684	706	0.95
7	19	0.00012	0.0074	16.1	1.7	1	22	712	733	712	736	0.91
8	19	4.7e-05	0.003	17.4	2.2	2	23	811	832	810	832	0.96
9	19	7.9e-05	0.0051	16.7	5.3	1	23	916	938	916	938	0.97
10	19	0.00041	0.026	14.4	1.5	1	20	943	962	943	964	0.94
11	19	0.032	2	8.5	0.2	2	23	975	996	975	996	0.98
12	19	2.6e-05	0.0017	18.2	0.6	2	23	1034	1055	1033	1055	0.97
13	19	5.5e-05	0.0035	17.2	2.0	1	23	1060	1082	1060	1082	0.94
14	19	0.00097	0.062	13.2	3.1	1	23	1088	1110	1088	1110	0.98
15	19	4.2e-06	0.00027	20.7	0.4	1	23	1125	1147	1125	1147	0.95
16	19	3.4e-07	2.2e-05	24.1	0.6	1	23	1153	1175	1153	1175	0.99
17	19	4.4e-05	0.0028	17.4	0.4	1	23	1181	1203	1181	1203	0.97
18	19	0.00098	0.062	13.2	4.6	1	23	1209	1231	1209	1231	0.96
19	19	0.0046	0.3	11.1	0.6	1	20	1237	1256	1237	1258	0.90

Sequence Information

Coding Sequence: ATGGGATCTGCCTCTTCGTCTGGCGTTATCGCAGTCCAACTCGGCGGTCCACCAAGTGGCTTCGAGTCGCGGTCGACCAAACAAAACATGGACGCCGTGGAAATAGATACGTCGGAACCGCCGCCGCAGCAGAGCGAGGATGTGATCGCGACCACGGTGGAGATATGTCGCGTGTGTCTACTCAGCAACCCGGAGATGCGTGATATCTTCCATGAGAGTGAGGATGCGTCCCTCTCGGCAAAGGCGATGAGCTTTGCCAACGTTAAGATGTTACCAGGTGATGGTCTACCAGCACAGTTGTGTTATGACTGTGCCAACAAGCTGGAGTCGGCATATGAGTTCAAGTTACAAGTGGAGCAAGCAGACGGTGTTCTGAAAGAGAAGCTTCTTGGTATGAACATAAAAGAGGAATTGTTTTTCAACGAGGTCGAGGTACACTTGGATGCTGAGAGAAATGATGCTATAGGTGAGTTAAGCGACGGTGCCGATTATGTATCTGCCACCACGGTACTACCAGGACAATCAGAGGATGACAAGAACCTCTTGAAACATGGACAGTTGGTGCTCTTGGAAGTTGAGAAGTTATCACAGTCAGAGGAGATACAGCAAAATCCGGAACAGGATGATTCACAAGAGATCACGCAGGAGATCACGCAGGAGATCACGCATGAAATCAGTGAGAATATTGCTGAGGAATTACAGAACGAACTATCCGGCACAAAGGACGTTGACACCTCGAGTGCCGTCGTGGCGTCTCAAGACTCAGAATCTTACAAGAACGAGATCGTGATCCAGGATCGCATGGACGCAATTCCGACACACGAGCACGATTACATCATGCAGCAGCAAAAGCCGACACCTGTAACAGAAGTGTCTATGCCCAAAGAGACGAAAGAAAGCACGCAATCATCGATTGAACCCGAGCAGGACGACGCAGCGGAACGCCCGGTAACGCCATTGGACGTGGTTACTCAAACCGAAGAGGAAAATCCAAATCAACAGCAAGAGTTGCCGGAGGAGTTAAAGGATTTCAAGGAAGCGAACGAAACGACTTTGGCGGAGCAACAGGACTCGCAACAGAGCGAGACCAGGAGGAGCAAACGCAAGTTGACTCGTCGAACCTTCACCGAGAGGGACTCTGACGAGGAAAACTATTTCGAGAATCTGAATCTCAGTTCTCGACTGAAGAGAGCACAGGCGGATAAGGCGGAAAAGGTCTTTTTCGTGTGTTATCTATGTGACAAGCAGTTCCTGGCGAAAAACGTGCTGAAGGAACACATGCATTCCCACGAAGAGGTCAGACGCGCCCTGTCCCTGAAGGAGACGCCGGAGAAGCCACCGAAGTCGAGCAGCATGCCGCCGTCCGGCAAGAAAGCTAACAAGTGCCCTTATTGTGGTAAAGAGTATCTGTACATAATCTCGTTTAACAAGCACATGAAACTACACGAACAGCAGAAGGAGGGCTTGCCGCTCGACATGTTTGTCGAGGACGATCTCAGCGCGGAATTCGAACAGTCGGACACGGAATACAGAAGGCGGACGAGGAGAAGCAGCGGCATAGCGATGACGAACAtcagcaacgacgacgacaagaaCGACGAGTCTACGAGCGACAAGGACAAGAGGAGAAAGCGGCCGCGCACTGAAGCGGAATTCGCATGCGACAAGTGCTCGGACGTTTTCGGCACAAAGCGGGGCTTGCACAAGCACATGTCCGCACGGCATGTCCACAAGTGCAACGTGTGCAAGGAGGAATTCGACACCTTGGAGCAGCTGAGAAAGCACCGTAGCAAGCATATAGAAGTTGAGGATTCGTTGGACGAGCAGGACACGGAGAAGCAGACGAAGCAGCGGAGTGGCGTGAAACACCAGGACGAAAACAAAGACGACTACGACTACGAGGATGCAGGCGAGGCGGCCGAGAATGACGACGGCGAGGAGGTCGCGACCACGAAGGAGCTCAAGTGTCCCAAGTGCCCGGCGACGTATATGCGCAGGAAAGCGCTGTCGAAACACATGGAGACGCATTGCGGGACCAACAGTCACAGCTTCAACTGTAAGGTGTGCAGCCAACAGTTCTCGAGGAAGGACCAATTGCGCAGGCATGCTGAGCAGCACGGCCGTGTGAAAGCTTACAAGTGCACTCAGTGCAACAAGACCTTCGGCAATGAATTCACCTTGAGGAACCATCTGATCTCCACGAGTCACAAGACTTTCCTGCATGGCCAAGAATATGATCCCAACAAACGTATTAAGCGTGTGGCCGCTAAAGCGGCACAAAAAATCATCGACAAGATCAAGACGGAAGTCGGCCTGGAGGACTtggacgacgatgatgacaaCAGTGACGATGATCAGCATTTCGCCACGTTAGGCAACTATTATCGCAAGCGCCGCACGCCAAAGAAATACAACGCCAAGAAGCATCTGGAGTGTGGCAAGTGTCACAAGGGATATAGCACTAAGCAGTCGCTGATGAGGCACATGGAGTATCACgtgaaagaagagaaggagaaggagcagTTGAAGAAAGTTATTacggagaagaaagagaaccaAAGGAACGACGATGGCGGCAACGCTGGCACTGACGCCGGTGCTGATGTTGGTGTTGGTGTTGCTGCTAATGTTGCCGCTGGTACTGGTGGTGCTGGTGCTAGTACCGTTGCCGTCATTGGcattgacgacgacgatgacgacgataacTCGGACTTCGAGAGCGGCCTGGATTGGCCTATGGACAATCATGAGTGCAGCACGTGCAAGAAGCGCTACAGCACGAAAAAGTCGCTGCAACGGCATCAGCTGCTGCACGAAGATCCAAACTTCGAGTGCGACATCTGCCACGTCAAGTTCTACCGCAAAGACAAACTGAAGGCACACTACGACAAGTGCTCGGAGAAGAACCCAGACCAGGTGAGGAAGTGCAACATTTGCGGCGATCGGTTCGAGAACAATGAGATCCTGCGCGTGCATCGGGCGACCCACGTGACCGAGGGCATTTTGACCGAGGAGGACCTGATGGATCTGGAGCCTATGCCTCctgaggagaagaaggagagagtcGTGCGTAAGAGACGAACCGACATCGTCGGTCTCGAGTGCACCGAATGCAACAAACAATACACCTCGCGGAAAGGGCTGTTGCGACACATCCAGGTGCACGAGGGCAAGAAGTTCCTCTGTGACATCTGCCCGAAAAAATTCTACCGGCGTGAGCATCTCAAACTTCACGTTGCCAAGCACAATATGGTGAAGCCGTATAAATGTCACCGCTGCACCAAGCGCTTCATCAAGGAGGAACAGTTGATAGGCCATTTGTCCAAGCACGACCGCATGTTCCGGAAGAACAAAGACGACACCACCAAGCGATTCCTCTGCGAGATCTGTTCCAAGAGTTTCACGCAGTCCACTACGCTGATAGCGCACCTTCGCGCCCACAACGGCATCAAGCCATATGTGTGCGAGGTATGTTCCCGGCCGTTCACCACCAATGCCTACCTAAAGATGCAcatgcgcacgcacacgcaagAGCGACCTTACATCTGCCAAtattgctcgcgcgcgttcgctcgtgcGGACACGCTCTCCAACCACCTGACCTCACACACTGGCGAGGCCAAGTACCACTGTAAGTTGTGCCCGCGCAAGTTCCGCCGGCTCAAGTCATTGAAGGAGCATACGTTCATCCACACCGGCCAACGGCCGTATGAGTGCCCGACTTGTGACCGCAAGTTCAACAACAACGGCAGTCGCTACGCCCACAGCAAGCGCTGCAAACAGAACCTGCTGCAGAGTCAGCATCGCGCGgcgcaacaacaacagcagcagcagcagcaacaacagcagcagcagcaagaacagcagcagcagcagcagcaacaagaacaggagcagcagcagcagcagcaagaacaacaacagcaacagcagctcTTGCAGTCGGCTCAACAGGTCCAAGTGCAGGTGCAACAAGTGCACCCGCAGCTGCAGCAAACCAGGATGACAACACTCAGCCAAGCCCAAGTGGTGAAGGCACAGAACATCAAGACCATCGCTATCGCGAGGCAGCCGGTCGTCGAGCCGACGATGGTTGGTACACATCAAGTGATGCAACATCAAGAGATACTGATGCCGCTAATATTGCCGCTCACCGTTACCCTCGCCGACGTCGGTGAGGAGGTAATACTGCCGGAAGGCACGAAGATCTTCACGACGACGTAA
Protein Sequence: MGSASSSGVIAVQLGGPPSGFESRSTKQNMDAVEIDTSEPPPQQSEDVIATTVEICRVCLLSNPEMRDIFHESEDASLSAKAMSFANVKMLPGDGLPAQLCYDCANKLESAYEFKLQVEQADGVLKEKLLGMNIKEELFFNEVEVHLDAERNDAIGELSDGADYVSATTVLPGQSEDDKNLLKHGQLVLLEVEKLSQSEEIQQNPEQDDSQEITQEITQEITHEISENIAEELQNELSGTKDVDTSSAVVASQDSESYKNEIVIQDRMDAIPTHEHDYIMQQQKPTPVTEVSMPKETKESTQSSIEPEQDDAAERPVTPLDVVTQTEEENPNQQQELPEELKDFKEANETTLAEQQDSQQSETRRSKRKLTRRTFTERDSDEENYFENLNLSSRLKRAQADKAEKVFFVCYLCDKQFLAKNVLKEHMHSHEEVRRALSLKETPEKPPKSSSMPPSGKKANKCPYCGKEYLYIISFNKHMKLHEQQKEGLPLDMFVEDDLSAEFEQSDTEYRRRTRRSSGIAMTNISNDDDKNDESTSDKDKRRKRPRTEAEFACDKCSDVFGTKRGLHKHMSARHVHKCNVCKEEFDTLEQLRKHRSKHIEVEDSLDEQDTEKQTKQRSGVKHQDENKDDYDYEDAGEAAENDDGEEVATTKELKCPKCPATYMRRKALSKHMETHCGTNSHSFNCKVCSQQFSRKDQLRRHAEQHGRVKAYKCTQCNKTFGNEFTLRNHLISTSHKTFLHGQEYDPNKRIKRVAAKAAQKIIDKIKTEVGLEDLDDDDDNSDDDQHFATLGNYYRKRRTPKKYNAKKHLECGKCHKGYSTKQSLMRHMEYHVKEEKEKEQLKKVITEKKENQRNDDGGNAGTDAGADVGVGVAANVAAGTGGAGASTVAVIGIDDDDDDDNSDFESGLDWPMDNHECSTCKKRYSTKKSLQRHQLLHEDPNFECDICHVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDRFENNEILRVHRATHVTEGILTEEDLMDLEPMPPEEKKERVVRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKFLCDICPKKFYRREHLKLHVAKHNMVKPYKCHRCTKRFIKEEQLIGHLSKHDRMFRKNKDDTTKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLSNHLTSHTGEAKYHCKLCPRKFRRLKSLKEHTFIHTGQRPYECPTCDRKFNNNGSRYAHSKRCKQNLLQSQHRAAQQQQQQQQQQQQQQQEQQQQQQQQEQEQQQQQQEQQQQQQLLQSAQQVQVQVQQVHPQLQQTRMTTLSQAQVVKAQNIKTIAIARQPVVEPTMVGTHQVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -