Basic Information

Gene Symbol
Znf541
Assembly
GCA_003227715.1
Location
NW:1135224-1214498[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6 2e+03 -1.6 0.1 29 42 835 848 833 850 0.87
2 2 1.9e-08 1.5e-05 24.4 0.0 2 46 1001 1045 1000 1045 0.96

Sequence Information

Coding Sequence
ATGCAGCAGACGCAACAGCAGCAGTCCGccgtgcagcagcagcagcagcagcagcagcagcagcagcagcagcaacagcagcagcagcaacagcagcagcagcagcagcagcagcagcaacagcagcagcaacaacaacaacagccgCAGCCACAACGATCCGGCACCACGGTGACGATAGCGTCGCAGTTGCAAAAGACACAAAAGCCGTCCGTCAAATCCATCGCGTCGCCCGGCACCATTTCCAACAGTTCGGGAAACGGGAGTGTGGCCAACAGCGCAAGATCAAGCCCCAAGCCGAAGGTCTGGAATCACTCACAGcaacaacagcagcaggcGCAACAACaggcgcagcagcagcagcagcagcaacagcagcagcagcaacagcagcagcagcagcaacagcagcagcagccacaACAACAGGTCGGCTCGCCGGGAAACGGAAATGTGGGCAAAGGTAGTCCGTCTCCCGGAAACTCGTCGTCTCCCGGCACCGTCGCGACCTCCAACAAGCTCCAGCCGGAGCAGAAGCCGGTGGAGTGCAATCTGTGCCATCGAAAATTTAAAAACATACCGGCTCTTAATGGCCATATGAGACTCCACGGTGGTTACTTCAAAAAGGACGCGGACAACAAGAAGAGCGAGAAGAAGGAGGTCGTCGGGCCGCCCCTGCAGACGGCGTCGGTCAGCGTGAGGGCGCTCATCGAAGAGAAGATCATACAGAAGAGAACGACAGCAGCGGACACGAGTGGCAATCAGCAGTCGCGTACGAACACCACCGTTTTCACTACGCAAGTCGACGCCATCTCGCAGATCGGAGGCAAGACGAGCTTCGCGGTGCCAGCACCGCCGCCCTTGGCTGCGGCCGAGAAGGTACGCCGGCTGTCCGATGGTGAGCATTTCCGGCAGCCCAATGTCACCGTGGGTGGTCACGCGACCGTGCAGAAACAAATGCAAGAAGCGCAAAATCAGGCTCAAGCACAGGCGCTCGCCGACCTGATCCTCAAGGGAGCGAAGGTGGCTGTGAAGAGGACAACTTCCGATCCGGGACAGAGATTACACCTAACGTACCAGCCACCCGTACAATCAGTGACAACCAATCAGCAAACGAATAATCAGCCGCAGGCGCAGCCCACGGTCACAGAAAGCTTCACGATGACGGGGTACGCCGAAGACGGCGGTTACTTCAGTCCGAGCTTGCAGGACGAGGTGTTCCATCAGGTCACCACGGTTCCCGACAGCGTGTTGCTACATGCCACGCAGTTGGACACGATCCAGTTTCAGGCGGCCGGCCTATTGCAAGAACAATCCACCGAGCAGCTGCAGGACATCACGCTGGAAGACCGGTACTCGTCGCAACACACGGTTAATCCGGACCTCCAAGCGCTGGTGAACTCCCCGTTGCCCGACTCCTTGGCCGAGTTCAGTACTTACGCCGCGCAATACACAGAAAGTCCCCATACCTTGCCGACCCagtcgccgctgccgtcgccgttgACGCGACACGACAGTCCGAGCTTCACATACCCCACCCCACCGGCTAGTCAAGAGGGCCTCCTCACCGGGAGCATACCGCTGCTGAGTCCGCAGGAGGACCCGGAGGGCGTGAGGCAGGTGTCGTCGCCGCTCTCGGCGGCGTTCTATACCAGCACGATGTCGTCCGCCGCGGCCGTGGAGGAGGCACTGAACGAGGTACTGCCAGGCGAATCCGAGGCGGACGCGGATCTTTACGGATCCGGCTCGCCGAATCCGCACTCGCCACTGCCAAGCCCGTTGTCGGCGACACCGGCGCCGTCGCCATTGTCCTCGCTACCGCCGTCCTCGATACAGTCGCCGAGACCGGTCGCCTTCACCAGCGCCACGGGTTTCCCGGTGTCGCCGCATCACGCGCTCCAGAGCCAGATGATGCCGAACTCGGAGGATCCGCTGCTCTCTTCCACCCCGAAGGACTTCACCACCGCCGGTCGCAGGCGATTCGAGTTCCAGTCGTACAAACTGATCACGAGCCAAAACCTGGTAGACTTCGGCCTAGGCAACGGCAACCTCGCCGGCATCGTCGTCGATAACAACGGCGAGTTCAAATTGATACAGACGTCGGGCCTGCAGAAGACGAACGTGCTGGTGCAAGCGGGCTCCCTCAGTCCAGCGGTGGCCTTTAAGAAGGAGGTTCGCTTGGCGACGCCGAAAATCGAGCCGGCGAACCTCGGTCTGAACGTCCAAACCAATCAGCAGTACAACAACACGGCTCAGTTCAATCAGCAGCAGATCATCAACCCGGCCAAGTTTCTCGTCCAAACTAACGAAGTGTCGAAGAACAATATCCTGAGACACAAGCCGACCGTCGGAAACTTGCCGATACCCATCGACCAGATTAAGGAGGAACTGTTGGACGAGGATGTGTTCCTCAGTCCCGGCAGTCTGCCCGCCAGCAGCCCCGTTCGACATTGTCGAAAGAGGCCGCGTATGGACGGTGGTCTGTATGCGAACAGTTCCAACGCTTATCCATCGAGGCTGCGGAAGGCTTGCGACCGCCACTGGGACAGCAGTTACACGCCACCGCCGATCTTAGACCCGTCCCGCCCTGGACCAGGGTTGTACGCAAGACTGCACCAGTACGAACGGGACTCGGACTTCAGCTCGGATGACTCTCAGGGCAACGACGGCCCACCGCCGAGGATCAACATCGGCACGAGGTATCAGGCCACGATACCACCGTTCGGCTGTGACGGGGACAGAAGAAAAAACGGGCCAGAGGCCGATCACCTGCTGTGGGACCCCGGCATCAACAACGTGCTCACAAGCACCGAACTGGAGATGTACCTGCAGTTCGCGTGTTGCGCCGCGGTGCCGGGCGGCGGTAGAAACAAGGAGTACGCACTTCACCTGCTGCACATGTGCAAGGGGAACATTCACGAAGCAATGGTGAAGTTAATGCGACCAACGCCGACGCTGCCGGTGGAGCATCCGCTGCTCAGCTACGAGTGCCACGAGTCCGACCGATGGACCGCGTACGAGATGGACGCGTTCTATCAAGGGCTACTCAAGTACAACAAGGACTtctgcgcgatctcgcgggATGTCGGTGCCAAGAGCGCGAAACAGTGCGTGCAGTTCTACTACCTCTGGAAGAGGCTCTGTCCCGACGAGTATAAGATGCTACGTCTTCGTCATGGAAAACCAAAAATCAAAAGCGAGATGAAAGATTCCAAGGACACCAAGGAACTTCGTGACGCCATCGCGTCCGTTACGGAGATGGACTTCAATGAAGATAAGTCGATCCTCCATCGTACTCTGCTGCaagcaagcgagagagagaattcggCGACTCTGACCACCAGCGAAGGGGAAATGAGGTTATTTGCGTATGACTGCCCAGATaGTTTTCAACAAAGTGAAAAGCAGAAGCGCGCACATGAAATCACACAGGCCAGTACCCTTGCCCGATTCAACGGGTCAGGAATCTAA
Protein Sequence
MQQTQQQQSAVQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQPQRSGTTVTIASQLQKTQKPSVKSIASPGTISNSSGNGSVANSARSSPKPKVWNHSQQQQQQAQQQAQQQQQQQQQQQQQQQQQQQQQQPQQQVGSPGNGNVGKGSPSPGNSSSPGTVATSNKLQPEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDADNKKSEKKEVVGPPLQTASVSVRALIEEKIIQKRTTAADTSGNQQSRTNTTVFTTQVDAISQIGGKTSFAVPAPPPLAAAEKVRRLSDGEHFRQPNVTVGGHATVQKQMQEAQNQAQAQALADLILKGAKVAVKRTTSDPGQRLHLTYQPPVQSVTTNQQTNNQPQAQPTVTESFTMTGYAEDGGYFSPSLQDEVFHQVTTVPDSVLLHATQLDTIQFQAAGLLQEQSTEQLQDITLEDRYSSQHTVNPDLQALVNSPLPDSLAEFSTYAAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSIPLLSPQEDPEGVRQVSSPLSAAFYTSTMSSAAAVEEALNEVLPGESEADADLYGSGSPNPHSPLPSPLSATPAPSPLSSLPPSSIQSPRPVAFTSATGFPVSPHHALQSQMMPNSEDPLLSSTPKDFTTAGRRRFEFQSYKLITSQNLVDFGLGNGNLAGIVVDNNGEFKLIQTSGLQKTNVLVQAGSLSPAVAFKKEVRLATPKIEPANLGLNVQTNQQYNNTAQFNQQQIINPAKFLVQTNEVSKNNILRHKPTVGNLPIPIDQIKEELLDEDVFLSPGSLPASSPVRHCRKRPRMDGGLYANSSNAYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQYERDSDFSSDDSQGNDGPPPRINIGTRYQATIPPFGCDGDRRKNGPEADHLLWDPGINNVLTSTELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIHEAMVKLMRPTPTLPVEHPLLSYECHESDRWTAYEMDAFYQGLLKYNKDFCAISRDVGAKSAKQCVQFYYLWKRLCPDEYKMLRLRHGKPKIKSEMKDSKDTKELRDAIASVTEMDFNEDKSILHRTLLQASERENSATLTTSEGEMRLFAYDCPDSFQQSEKQKRAHEITQASTLARFNGSGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00729993; iTF_00730334;
90% Identity
-
80% Identity
-