Basic Information

Gene Symbol
XBP1
Assembly
GCA_003227715.1
Location
NW:329363-333142[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.6e-14 5.4e-11 41.8 14.9 2 56 90 151 90 155 0.83
2 2 3 1.9e+03 -1.6 0.2 35 48 228 241 224 247 0.75

Sequence Information

Coding Sequence
ATGAGCTGCGCGAAGAGCTCACTGATCCTCGCCTTGCCTAAAGAATCGCGCAAGCAGCTCCTGCGGGACGAAGTGAGGCGCGACGCGCTCACCAAGCGGACTGCCATCGCATCGATCTTGCTGAATAAGGCGAAGATGGACGCCAGGAAACTGGCGCCCAGGCAGCAGCAAGAAGACATGGACGACGATGACGCATCGGTGCTCTTCAAGTCCGCGACGGACGGGAATTCGCGCGGCAAGAGACGTCGACTGGACCATCTGACGTGGGAGGAGAAGCTACAGAGAAAGAAGATGAAGAACAGGGTGGCAGCCCAAACCTCTCGGGATCGGAAGAAAGCCAAATTGGACGAGCTGGAGCTGACAGTAAGGACGCTCACGCAGGAGTGCGTGATGCTGAGGTCGCAGAACGAGTCGCTGTTGAGCGAAACGAAAAGATTGAGGAAGGAATTGGACACTAAGAACAGGGAGGAGCGATACTGCACGTTGTGCCAGGCTCGTGTCCACTGTTGTACCCTCACTGGGATCTGCAGTATCCCCAAATCACCCTCTGCCGCAGGGTGGGACAGCGCAGTTGGCATCGCGCCTGACGCCAACACCAGGAGCAGTTGCTCTATTGAAGATCCTGACCCTTTACCTCCTCTCGAAGAACTTTGCGGCGACCTCCAAGATGACGACTACATCGAGCGACTCGAGGAACTCGCGGAGAGTCTACTGCGAGAAGTTAATGTCGAAGTGCAAGCAGCTCCTGACAAATCAAATGAACAAGTGTCCGTCAAGGACGATCCCGTTAAAAAATCTGGCCATCCAGAGACAGTGGTGGGGCAGACATCAGAAAATGTGGAAGCCAATCGAGCTGGTGAAGGCGTAAATGATGCGTCCTACCTAATCGCGGACTTCAGCTCGTCAGTTTATCATCCCGCGAGCTGTGCTGCAAGGAGCGAGGCGCAGCAACGCGTCAGTTCGACGACGTCGCCGTTGGCGATTAAGACCGAAGTCGAGATCAAACAGGAGTCCGAGCTAACGCACGATATGGAGGCCACCTTTTACGGCACGTACGACGAGGCTACGAATTCGATCACGATCATCTATCCGGGCGAAGAGAACGCGGGTATCGGTATTCAGGAGTGCGTGCAAGAGATCAGCACGGACGACGGCGTCGTATGCCACCCTGTGGACGACATCGCAGCCGCggccactgccgccgccgccgccaccaccaccaccaccagcaccaccaccagcaccaccaccaccaccagcaccaccaccatcaccggCACCACCGACGTTACCAGCAACGTTAGGTATCTCTCGCCGCCGCCTATTCACAGTTACTCCACGCAGTTCTCCCCGGCGTACACCTGCCGCACCGACACCATGTCGCCCGCGAGCATCAACTCTGACGCGGATTCCTGCGTCGTCCCACAAATGGACAGCGCCAGCATGGATTGCGGCTACGAGTCGCACGACTCTCCGTCCGTCGACTCGCATTGCCGTTACTCTTACTTCAACGACTTTTGGCACGAAAACTTCAGAGAGCTGTTTCCTGCGCTTGCCTGA
Protein Sequence
MSCAKSSLILALPKESRKQLLRDEVRRDALTKRTAIASILLNKAKMDARKLAPRQQQEDMDDDDASVLFKSATDGNSRGKRRRLDHLTWEEKLQRKKMKNRVAAQTSRDRKKAKLDELELTVRTLTQECVMLRSQNESLLSETKRLRKELDTKNREERYCTLCQARVHCCTLTGICSIPKSPSAAGWDSAVGIAPDANTRSSCSIEDPDPLPPLEELCGDLQDDDYIERLEELAESLLREVNVEVQAAPDKSNEQVSVKDDPVKKSGHPETVVGQTSENVEANRAGEGVNDASYLIADFSSSVYHPASCAARSEAQQRVSSTTSPLAIKTEVEIKQESELTHDMEATFYGTYDEATNSITIIYPGEENAGIGIQECVQEISTDDGVVCHPVDDIAAAATAAAAATTTTTSTTTSTTTTTSTTTITGTTDVTSNVRYLSPPPIHSYSTQFSPAYTCRTDTMSPASINSDADSCVVPQMDSASMDCGYESHDSPSVDSHCRYSYFNDFWHENFRELFPALA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-