Hruf048488.1
Basic Information
- Insect
- Harpalus rufipes
- Gene Symbol
- pnr
- Assembly
- GCA_951394225.1
- Location
- OX596286.1:22741169-22748608[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 1.8e+04 -2.7 0.0 8 16 69 77 69 78 0.85 2 3 1.8e-18 3.1e-14 54.1 3.2 1 34 135 167 135 169 0.97 3 3 1.3e-19 2.2e-15 57.8 5.8 1 35 189 222 189 223 0.98
Sequence Information
- Coding Sequence
- atgaatccaatacctctcttagcgagagCCATAGATGTAACCGTCATGTTCCCCTCACCATCAACCTCCTACCCGGACAGCAGCTACCCCCAACACCTCCCGCAACAACCCCCCGTCTACGTGCCGAGTAGTCGAGCCGTGGGGGCCGTAGGGGTGCCCGGTCAGTACAGCGGCAGCAATAGCGGCCACTTCAGCGCTCCTCCCCAAACGTCCAGCTGGCACGCGGACCCCGGGTACACGGGGGCGCACTCCCTAGGAGTTGCCAACCCCCATCACGGACTCACGGGGCAGTTCTACGCGCAGAATATGATGATGGGAGGGTGGAGGGCGTATGATACTGGGTTTCAGAGGACGTCGCCGTATGAAAGTGCGATGGACTTTCAGTTTGGAGAAGGACGCGAATGTGTGAATTGTGGGGCAATTTCGACGCCACTTTGGCGTCGAGATGGTACCGGACATTACCTCTGCAACGCATGCGGGCTTTACCACAAGATGAACGGCATGAATCGACCACTAATCAAACCGTCCAAAAGACTGACTGCCACCCGTCGGCTAGGCCTCTGCTGCACAAACTGCGGCACCCGCACCACGACCTTATGGCGACGGAACAACGACGGCGAGCCGGTGTGCAACGCCTGCGGGTTGTACTTCAAGCTACACGGCGTCAACCGACCGCTGGCCATGCGCAAGGACGGCATCCAGACCAGGAAGCGCAAGCCCAAGAAGCCATCGGGCGGCAGCGCAGACCGCGAGGAAGGCTCCGCCCCCAGCGACGATACCAAATCATCAACGGTTCATCACACTCAGTCAAACCAAGGCCATCAACATACCTCATCCACTACAGTAGAAACATCAAAATCATCATCAGAGAGACCGTATCTTGGACAAACATCACTCCTGCCTTCCACGTCGTCGTCATCGACATCGTCTTCAGGGATAAAAAGCGAGCCAGGGTACGACACCATGGCGTCATCACAATATAACTGCCTGCAGACTCACCAGGGGTACTCCGCCTACCACCAGCAGATGTTTGGGTTCTCGGCCGGCCCGCCTAGTGGCTCCGAGGTAGCGTATCATCATCAGCATCATGTGACAGCTGCGGCGAAATTAATGGCATCTTCGTAG
- Protein Sequence
- MNPIPLLARAIDVTVMFPSPSTSYPDSSYPQHLPQQPPVYVPSSRAVGAVGVPGQYSGSNSGHFSAPPQTSSWHADPGYTGAHSLGVANPHHGLTGQFYAQNMMMGGWRAYDTGFQRTSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPSGGSADREEGSAPSDDTKSSTVHHTQSNQGHQHTSSTTVETSKSSSERPYLGQTSLLPSTSSSSTSSSGIKSEPGYDTMASSQYNCLQTHQGYSAYHQQMFGFSAGPPSGSEVAYHHQHHVTAAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01105245;
- 90% Identity
- iTF_01105245;
- 80% Identity
- iTF_01105245;