Hruf014944.1
Basic Information
- Insect
- Harpalus rufipes
- Gene Symbol
- -
- Assembly
- GCA_951394225.1
- Location
- OX596277.1:27996387-27996779[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-11 2.6e-07 32.2 6.5 3 114 10 115 8 117 0.83
Sequence Information
- Coding Sequence
- ATGGATTCTTCAACAATTTATATGAAATCTAACAGATGGTTTTCCgttgaagaatattttgatattttatcaaGAATCGATGTAGAACAATGTATTGATACGCCACCTGCTAATCCAAAACCTGGGgaaatttttgtatacaaaaataataataaaagagtaGATTGGAAGTCTGATCAATATAGATGGCGTCACATTGGAACTAAAAATCTACCTAAATCTTGTCCACTTGTTAGAtgctattattataaaacttacgcAGGTTACGGTTTTGAAAGAAGGGCTTATAATTTGTACGATGAGCGTGATAACAATTATCAGGAAGTAACACTTATCCACTATGTTGGCTCTCTTAAAAACGTTACTCATTctgtgacggtggccccgtcgTGA
- Protein Sequence
- MDSSTIYMKSNRWFSVEEYFDILSRIDVEQCIDTPPANPKPGEIFVYKNNNKRVDWKSDQYRWRHIGTKNLPKSCPLVRCYYYKTYAGYGFERRAYNLYDERDNNYQEVTLIHYVGSLKNVTHSVTVAPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -