Basic Information

Gene Symbol
TRERF1
Assembly
GCA_951394225.1
Location
OX596280.1:43170084-43185365[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-09 4.2e-06 28.6 0.0 3 46 902 945 900 945 0.96

Sequence Information

Coding Sequence
ATGGATCAATGGATACCTTACTATTATCGATACTACCAGTCGCAGCAAACGTCATCAACGAAAACCAGCACCAATACCAGCTCATCATCCCCTCAAGTAAAGTCCACAAATGCGACATCCACAACAGTGGCAGCGTCTTCAGGGACTGCTGCCACTACTACCACCCCCACAACAGCTGTAGTAGCCAAACCCGAGCTCAAACCAGTAGAATGCAATCTTTGCCATCGAAAATTCAAAAACATCCCTGCTCTAAATGGCCACATGAGGCTACACGGTGGTTACTTTAAAAAAGAtgctgaaaataaaaaatgcgaaAAGAAAGAAACTTCTGGACCTCCTTTGCAAACCGCTAGTGTAAGCGTAAGAGCTCTAATAGAAGAGAAGATTATCAGTAAAAGAACTACAGCGCCTAGTAATACAACAAACAATACGACTACTACAGTTAGTTCTAGTTCTGTGACGCCATCTCCTACCGAGAGTCAGGCTCCCCCTCTGTACCCGCTGTCCATGCATTCCACGGCAGACGCCGACGCCAAAGTGACGTCGTTCGTGGTGCCAGCCCCACCTACCACCACCACCAGCACGGTAACTCAACCGGCGCCTGCGCCACTCGCACCCAGGAGACATTCCGACGCTGAATTCACAGTGCCTAGAGCTCCCACAACCGCTGTCCAGCAAGAAGCTGAAGCAATAGCAGATATGATTCTCAAGCGACAAGCAAAAGTATCAGTCAAACGAACCATTTCAGACCCAGGGAGGACTACACAACCCCAACAAATCCAATTGCAATTTCAACCTGGGGATGCCTTTATAGACGTTGGATATTTATCCCCTAGTTTACAAGACGATGTTTTCCATCAAGTGCAAGACACAATGTTGTTACAAGGAGTTGATGCTCAACAGTTAGTTCAAATACAAGCTTCCCTATTGCAAGAACAAGACGAACAATTACAAGACATTGCTTCATTGGAAGACTACGCGACGGTAACAGCTAGTTTGCAAGAAACAGTTGTAGATTCTGCAACATATCAACCTAGACAAGTCGTCAATCAAGAACTACAAGCAGTCTTAGATTCACCCCTTCCGGAAAGTCTAGCCGAGTTCAGTACCTTCCATTCGAGTATGCCTTCTCCGTCTCAGCAATTCACAAACTCGCCTCATCCTTCACTAGCGGCGCAAAGTCCCTTACAATCACCTTTAATCAGGCATGATTCTCCAGGATTTGCGTATCCTACACCACCTGCTAGCCACGAGGGTCAAAGTCCTTCTTTTGTACAAACATCAATGTTACCGATGATTTCTCCACAGCAAACTGACTTTGTACAAAATGTTAATGCGACGAGAGATCCGGAAGAACCACCTCAAGCATCTTCGCCGTTGTCTGCTGCTTTCTTTACATCAACAATGTCAAGTGCAGCAGCTGTTGAAGAAGCTTTAGAAGAAGTACTTCCCGGGGAGAGTATATCTCCTGACGACATATACCCGTCTTTGTCCAATTCGCCACCTCCACAATCACCAATATCTGTGGCGATGACTCCAGTACCTTCTCCATTGTCTAGTATACCTACCTCCACGACTTCTGTTTCATCTCCAAGACCGCCTGCCTCCTTCACCCCTGTTTcaacaaatataacatttccTATGTCTCCTCATTACACCCTTCAATCCCAAATGATGCCTAATTCAGATGATCCCTTGCTATCGAGCAGTCCCAAAGATTTCTCAACAAGGAAAAGATTTGAATTCGGTAGTTTACAATCTGTTAAGATTGTAGGTAATGGATACATCGATTTTGGAAACCCCAATCTGGCTGGAATACTCGTGGACAATAATGGCGAGTTGAAATTCATACAGACATCTGGGAGTCCAATCCAAGCTAAGAATTTGATAGTAGCTAGTAATATACCATCTCCAAATACAACGATTAAGGAAGAAGTGAAAAATGTTCCTCAACTTCGGTTGCAGAAAATTAGTAAAACGACGCAATGTACAATACCTGGGAATAAGAATCAAATTCCTGGTCATCGGCCTAAGTTGCACGTTGCAGTAGATAATGTTAAAACCGAGGAAGCAGACGACGTTTTTCTTAGTCCTACAACAATTCCGGCAAGTCCGAATAGGATATCCCGGAAACGACCGCGTTCTGAGCCTCTCCAACTTCCGGTAGTCCACCAGTCTCGTCTTCGAGCAGCTAGAGGTCGACCCCCTGGGGCTGCACCCTACACCCCCTTGCCTATGCTGAATCCTTCGAGACATGGTCCTGGACTTTACTGGAACGCTAAGTTGAAAACTACAGTCGCGGCCAATACCCAAAATAATCAAGATGATAGTTCTATATCATCGACTTGTGAATCAATTCCTGAGAGCGATTCGACGCCTCATATAAACGTTGGGTCGTCGTATCAATGTTCTATACCTCCTTGTAAAGTAGGGAGAGATAGAGATGACCGGGAACCGACGTATGAACATCTCCTCTGGGACCCTGGTATAAACAACTTTTGCACTGATAATGAAGTTGACATGTACTTGGATTTCGCATGTTGCGCTGCAGTTCCAGGTGGCGGACGAAATAAAGAGTATGCTTTACATCTGCTTCATATGTGTGGCGGTAACATTCATGAGGCAATGCTGAAACTAATGCAACCAACACCATCGTTACCACCAGATCACCCGCTGTTGCACTACCATTACTCCGAGAGTGACCAGTGGACAATAGCCGAGACAGAGGCCTTCCATCAAGCTATCCTTAAACACGATAAAGACTTCTTCAGCGTTGCGAGAGAAatCGGTTCAAAATCCGTAAAACAATGTATACAATTCTACTACGTCTGGAAGAAAGTTTGCGTGGATGAGTATCGACGGCTTCGGTTAAATCGGGAGCATAAAGGATACGGGAGTGGGAAATCCTATGCAGAGGACTTCGAGGAAAAGCCTTGCCTGGATACCAAACTGCTTGGAATTGCTGAAACGGAATCACCGATGTCCGTTGCAGATCACAGGCATTTTAGTTGCGATTATTCAGATTGTTCTGCAACCTTCAACTCCCGGGCGGCTCTGTCAGGCCACATTCGCATCCATAGCGGAGGTGTGCGTCGTTCCCCAACCCCCACTTCTCACCTGGAAAGGCGAGTAACCAGCACCCCCACGCCAGCCACGACAGAACTCTCGGAAGAGTTCCCTTGCAAAATATGCGGGAAAGTGTTCAGTAAAATAAAAAGCAGAAGCGCGCACATGAAGTCCCACCGTCCCCCGGATGTGGAGGCGAAGAAGAAGAGTAACGAATTTCTGCCCGGCCTAGTTCCTGATACGACCATATCAAGTCCAGTCGCGCATGCACCATGA
Protein Sequence
MDQWIPYYYRYYQSQQTSSTKTSTNTSSSSPQVKSTNATSTTVAASSGTAATTTTPTTAVVAKPELKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKETSGPPLQTASVSVRALIEEKIISKRTTAPSNTTNNTTTTVSSSSVTPSPTESQAPPLYPLSMHSTADADAKVTSFVVPAPPTTTTSTVTQPAPAPLAPRRHSDAEFTVPRAPTTAVQQEAEAIADMILKRQAKVSVKRTISDPGRTTQPQQIQLQFQPGDAFIDVGYLSPSLQDDVFHQVQDTMLLQGVDAQQLVQIQASLLQEQDEQLQDIASLEDYATVTASLQETVVDSATYQPRQVVNQELQAVLDSPLPESLAEFSTFHSSMPSPSQQFTNSPHPSLAAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPSFVQTSMLPMISPQQTDFVQNVNATRDPEEPPQASSPLSAAFFTSTMSSAAAVEEALEEVLPGESISPDDIYPSLSNSPPPQSPISVAMTPVPSPLSSIPTSTTSVSSPRPPASFTPVSTNITFPMSPHYTLQSQMMPNSDDPLLSSSPKDFSTRKRFEFGSLQSVKIVGNGYIDFGNPNLAGILVDNNGELKFIQTSGSPIQAKNLIVASNIPSPNTTIKEEVKNVPQLRLQKISKTTQCTIPGNKNQIPGHRPKLHVAVDNVKTEEADDVFLSPTTIPASPNRISRKRPRSEPLQLPVVHQSRLRAARGRPPGAAPYTPLPMLNPSRHGPGLYWNAKLKTTVAANTQNNQDDSSISSTCESIPESDSTPHINVGSSYQCSIPPCKVGRDRDDREPTYEHLLWDPGINNFCTDNEVDMYLDFACCAAVPGGGRNKEYALHLLHMCGGNIHEAMLKLMQPTPSLPPDHPLLHYHYSESDQWTIAETEAFHQAILKHDKDFFSVAREIGSKSVKQCIQFYYVWKKVCVDEYRRLRLNREHKGYGSGKSYAEDFEEKPCLDTKLLGIAETESPMSVADHRHFSCDYSDCSATFNSRAALSGHIRIHSGGVRRSPTPTSHLERRVTSTPTPATTELSEEFPCKICGKVFSKIKSRSAHMKSHRPPDVEAKKKSNEFLPGLVPDTTISSPVAHAP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00767655;
90% Identity
iTF_00767655;
80% Identity
iTF_00769236;