Hruf005110.1
Basic Information
- Insect
- Harpalus rufipes
- Gene Symbol
- Mblk-1
- Assembly
- GCA_951394225.1
- Location
- OX596274.1:89391883-89410256[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-17 2e-14 54.9 0.1 1 45 248 293 248 293 0.96 2 2 1.6e-17 6.1e-15 56.5 0.0 1 43 623 666 623 668 0.95
Sequence Information
- Coding Sequence
- ATGTCTACCGGTGAAATAATACAATCAGCCACGCAAACTTATGATAAATGTTTGttacataaaattatagGGTTGGAAAGGATCGCTGAAGAGTTGATGGGTCGTAGGAAATGGAAGCTTTACCAAGAGTGTGTATTCAGATCTCAGCATCAACAAGTCCCAATCAACAACAACGTATTAGAGAGCAAAGTAAAGCAAGAAATAACCGAGATCGACGAGCAGGAGAGACTGAAAGACTGGTCACCACAGAACAAGTGTTACTTGTGTGTGGACGGCAAACTGGATAGTGAACACACCATTCACGGGGCTCTGAGCCCGCATCCATCCGATTCCGAGAGCAGCGAGAGTCCGAGCGACTCGGACGCGCCACCAACGCTCACGCCCTCCCTGCACCTGCTGAAGAGAGGACGGCACGGGCAAGGGCACGTAGCCACCGGTGCGATGACGTCGCTCGTGCCTCCTGCTACCGCCGGCGCCGCAGGCCTTCCGTTCTACCCCCAGCTGTTCGCCGGCACGCCCAACTGGTACCTGAGCTCCCTGGCACGCAACCTGCACCAGCAGCGTGACTTGGACCCGGACAAAGTCATCCCCGTTGCTGCAGAGCAACCTCTAGATCTCAGCGCCAAACCCGGAAACTCCCTAAACATGCCTCGGTTGCCGGTTGTTGataccaaaaatattttcaaTTGTGATTTCAGAGCGAAACCACGCATGTCGACGGTAGGCGGGCGGCGCACATACACGGAGGAAGAACTGCAAGCAGCATTGCGCGACATCCAAAGCGGCAAGCTTGGAACCCGCCGTGCGGCAGTCATCTACGGCATCCCTCGCTCCACCTTACGCAACAAGGTCTATAAACTAGCCATGGAACGCGAAAGGGAATCACATCTCGCACCACTCGTTGACGAAGACGTCATGGATTACGAACGCGAACTCTCGGGTGCCGAAGAAGAAAAGGAGGTAGAAAAGGCCTTACAAGGTCCGTTGGTATCAATGGATGATATTGTTAGGTTTGCTGATTCGCCAGAAGCATTGCGCACGCTACTTAGGCAGCAACAGTTGAAAAGTGGTAATGGAAAAGAAGAACAATGGGAAACATTAGATCCCAGTGCATTAGGTCCTTATATTCAACTGATGATGGCAGAAAAATTAGCAGCTAAGGACCCTGCTCTCATGCCTATATTAcctgattttatgcgcaaagtCATTGGTGACGAACCACCTGTTAATAACGGCGAAAACGAAACCAAACCACTAGTACCACCACAATCGAGTCCATGTAActcaattaaaacaaaaacggATTCGTCCGATATGGACACTGAAGATTCTCCCGCCAATGTGATACTGAAAATTCCGTCCTTTAAACCCACTACTAGTAAGAATGGCGGTGACACATACCGAAATGAAACTGGTTCCTTAGCGTCACCACCCGTTACTAGTGAATCAGGCTCACCGCCAATCGTTACAAGCAGTATGTTATCGTTGCGTGAAGCAATTGCTAAAAGTATCAGTCAAAAGTTTCAACAAAATCCCGAACCACTAATACGTCACCCAACGCCAATTGACATTGATTATAAACGTGTAGGTATAACACCACCTTTAGTTGGTTTAAATCCTGCCATGAAAAACCCTCATCATCCGCCTCAACCGATACCCGAATCAGTTACACCACCAACTGTTACACCCCCTTCCGGTTTACCACCAACAAGAACCTTCCAAGGATCTGTAGTCAAAAACAATGCTACCAACTCACACCTACACACGCCAGCTAGTAACAACAGTACAAATAGCAGTAGCGGCAGTGGAGGTAGCACTCAGGGCGGCAAAGGAACACGCCCCAAACGTGGCAAATATCGGAACTATGATCGCGATAGTTTAGTCGAAGCAGTGCGAGCTGTACAACGCGGCGAAATGTCTGTTCATCGTGCAGGCAGCTACTATGGTGTACCTCATTCAACATTAGAATACAAAGTTAAGGAACGTCATCTCATGCGGCCACGAAAACGCGACCCTAAACCCAACCCTGTCGATGAAAAAATCGCTTCTTTAAAAAATCAAGAGATACGTAACATTCCAGACAAAATGAAATCTGTGATTAAACCTCCTCAGAAATACCCACCAACTTCCCCCAATGGTATTAAAATGCCAGCGATGTTTGACCCCACAATGGCATCATTGGGGTACACGCCACCACCTTTTTCTTTCTGGCCGCATCCACAATTCCCACATTTACCCCTTGAGTATCCCCGAAACACGCCATCTTCTCAATTCCCAACGAGTCCTGATTTCTTCGCATCACAGATGATGCAACAATTGCAAGAACGGTCGGGACGTTGCCATACGGAAGGAGCTGCAACTACAGCTGCATGTGCAACTGAAactacaacaacaacaacaactgCAACTGGTGCAACTGGTGCAAATGGTACCGGCGGAGGTCTTGCCAAAAGTGCTCGCGAGATGGCTGAATCACTTTATGACGGAACAGGTGCAAATGGTTCATTTCTTGATGGAATTATCCGCTCGAGTTTAGATTCCGGTGTACCGAGTATTACAGACAAAGCAGCCAGCAAAGAAGAAAAGAATGTAGCGCCtgaaaatatgtcaaataaagCACTCCTTGACCAGTTATGTAGAAACAGTCGCATTACTCCCTTATCAAAATCAACAAATACTGAAGCTAACAGCTCAGGCGATGAAGCAAGCCAAGACATCCAAACAATTGAGCTATGCAACGATTCAAACGAATCAACAGCGCAAGCGCCAGCGGGAACCAGCACCAAAGAAGAAGAAGCAAAAGAatcaccaccaccaccaccatcACGCATCTACGTCAAGCCACAATTCCAAGAGTTAACGAAACCTGAGAATTTAAAACCTGAAGTTCTGGTGCGCTTCAGAAGTACCAGCGATGAATGTGAGCCGTGCGCGAATGGGCTTGACACAGGAAGTGCCTCTGAAAAACCGGATGTGGCCCAAGACTGA
- Protein Sequence
- MSTGEIIQSATQTYDKCLLHKIIGLERIAEELMGRRKWKLYQECVFRSQHQQVPINNNVLESKVKQEITEIDEQERLKDWSPQNKCYLCVDGKLDSEHTIHGALSPHPSDSESSESPSDSDAPPTLTPSLHLLKRGRHGQGHVATGAMTSLVPPATAGAAGLPFYPQLFAGTPNWYLSSLARNLHQQRDLDPDKVIPVAAEQPLDLSAKPGNSLNMPRLPVVDTKNIFNCDFRAKPRMSTVGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERESHLAPLVDEDVMDYERELSGAEEEKEVEKALQGPLVSMDDIVRFADSPEALRTLLRQQQLKSGNGKEEQWETLDPSALGPYIQLMMAEKLAAKDPALMPILPDFMRKVIGDEPPVNNGENETKPLVPPQSSPCNSIKTKTDSSDMDTEDSPANVILKIPSFKPTTSKNGGDTYRNETGSLASPPVTSESGSPPIVTSSMLSLREAIAKSISQKFQQNPEPLIRHPTPIDIDYKRVGITPPLVGLNPAMKNPHHPPQPIPESVTPPTVTPPSGLPPTRTFQGSVVKNNATNSHLHTPASNNSTNSSSGSGGSTQGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKNQEIRNIPDKMKSVIKPPQKYPPTSPNGIKMPAMFDPTMASLGYTPPPFSFWPHPQFPHLPLEYPRNTPSSQFPTSPDFFASQMMQQLQERSGRCHTEGAATTAACATETTTTTTTATGATGANGTGGGLAKSAREMAESLYDGTGANGSFLDGIIRSSLDSGVPSITDKAASKEEKNVAPENMSNKALLDQLCRNSRITPLSKSTNTEANSSGDEASQDIQTIELCNDSNESTAQAPAGTSTKEEEAKESPPPPPSRIYVKPQFQELTKPENLKPEVLVRFRSTSDECEPCANGLDTGSASEKPDVAQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -