Hrub062527.1
Basic Information
- Insect
- Harpalus rubripes
- Gene Symbol
- GATA5
- Assembly
- GCA_963082715.1
- Location
- OY720460.1:29007052-29026510[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-17 9.9e-13 49.7 3.8 1 35 308 341 308 342 0.97 2 2 6.8e-19 1.6e-14 55.5 6.6 1 35 364 397 364 398 0.97
Sequence Information
- Coding Sequence
- ATGGAAAATTCCCCTCAAAAGTCATCTCCTCCTTCCAATGAACCAGAAAACAAACAACAAAACTCCCCTCCTGAACAACAGCATTCTCCGCCTGTAATATCCATGCCTCAACAACAATCAGTCATCACCAACCGCCATCTTGTGCGAACCATCACTACCACCGGAGTCATCACTATGGAGGAAGTAGAATCCGAAACGCACAATTCTCCTGAGCAGATTCAACACCAACAAGTCGTTGAAGAAATTGTCCAGCAAGACCCTGAAGACAAAGTACAAGTTGCTGCTATGAGATATGCCACACCTGGACCGAGTGAACAATATGCGGCATCTCCAGAACAGGAAGGATATCAGACCGTTTATGCAACTGCAGAAGATCAGCAAAGTTATAATCAGCTTCAAGACGGAAGATATATTGTTGTTGAACAAGGGGAACCTCATGTGTATGTGCAAGAAATGCCGTATACCGAAGCAGAACTTACTCAGAATGAAGAAAGACATACTACTACTTACATAAATTTGGAAGCACCTTCTCAAGCAAATCACTTCAACAATCAGTTCACTGAACCACAATTCTGCATAAATCCTAATATCATATCGCCGGCAAGAACAGACGACCAGACTCCCCCAATGTATCGCAATGACCCTGCTTTAAATTCTCATTTTTCGGAACGAGCAACTCAACTATTGTATCAACACCATCCACAAGACGCTATATACGAATCAACTCCATCTACATCAGCCGGAATCACCTACCAATTCCCGATGAATGGTGCAAATGAGTATATGATTCAAAACGGCCCGAACTTCCAAGTTGCAGAAGACAACATTCCGGGGTATACGTACTCCGCGAACAGTTCCACCAATTGGAATTCGAATAATGGGAGCTATGAAGGAGCTATAATGCCGGGCGATGTGAGAGAATGTGTGAATTGCGGCGCGAGTTTGACTCCGCTTTGGCGCCGCGATGGTACCGGGCATTATTTGTGTAATGCTTGTGGATTGTACAGTAAAACTAATGGCGTTAATAGGCCGCCGGTTCGTAACCAAAAGAAACCTGCTTCTAATGGAACCCGACGGGCTGGAGTCACTTGTGCTAACTGTCACACAAGCAAGACGACCCTTTGGCGAAGGAATAATCAGGGAGAGCCAGTTTGCAATGCTTGTGGACTCTACTACAAACTTCACAATGTCAACCGACCTCAGAGTATGAAGAAAGATGGGATTCAGACCAGGAAACGTAAGCCGAAGAACTCGTCTAATACAATGATGATGCCAGGGCCATCAGGGATGCAGCAGAGAGCTACATCTATCGAATCCCACCAGCTGCAAGCCAACGAACTCAGCGTCATCACCTCCACGTCCGAAGCCTCAGGTATCCAACTCCGAGAACGTCTTCATCACCCTCCAGGTCCACACGATGACAGCAAGGGCCGACGACTCAACTAA
- Protein Sequence
- MENSPQKSSPPSNEPENKQQNSPPEQQHSPPVISMPQQQSVITNRHLVRTITTTGVITMEEVESETHNSPEQIQHQQVVEEIVQQDPEDKVQVAAMRYATPGPSEQYAASPEQEGYQTVYATAEDQQSYNQLQDGRYIVVEQGEPHVYVQEMPYTEAELTQNEERHTTTYINLEAPSQANHFNNQFTEPQFCINPNIISPARTDDQTPPMYRNDPALNSHFSERATQLLYQHHPQDAIYESTPSTSAGITYQFPMNGANEYMIQNGPNFQVAEDNIPGYTYSANSSTNWNSNNGSYEGAIMPGDVRECVNCGASLTPLWRRDGTGHYLCNACGLYSKTNGVNRPPVRNQKKPASNGTRRAGVTCANCHTSKTTLWRRNNQGEPVCNACGLYYKLHNVNRPQSMKKDGIQTRKRKPKNSSNTMMMPGPSGMQQRATSIESHQLQANELSVITSTSEASGIQLRERLHHPPGPHDDSKGRRLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00769312;
- 90% Identity
- -
- 80% Identity
- -