Hrub062531.1
Basic Information
- Insect
- Harpalus rubripes
- Gene Symbol
- pnr
- Assembly
- GCA_963082715.1
- Location
- OY720460.1:29167203-29179998[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.99 2.3e+04 -2.6 0.0 8 16 54 62 54 63 0.85 2 3 1.7e-18 4e-14 54.2 3.2 1 34 120 152 120 154 0.97 3 3 1.2e-19 2.9e-15 57.9 5.8 1 35 174 207 174 208 0.98
Sequence Information
- Coding Sequence
- ATGTTCCCCTCACCATCAACCTCCTACCCGGACAGCAGCTACCCCCAGCACCTCCCGCAACAGCCCCCCGTCTACGTGCCTAGCAGTCGAGCCGTGGGGGCCGTAGGGGTGCCTGGTCAGTACAGTGGCAGCAATAGCGGCCACTTTAGCGCTCCGCCCCAAACGTCCAGCTGGCACGCGGACCCCGGCTACACGGGGGCGCACTCCCTAGGAGTTGCCAACCCCCATCACGGTCTCACGGGGCAGTTCTACGCGCAAAATATGATGATGGGTGGGTGGAGGGCGTATGATACTGGGTTTCAGAGGACGTCGCCATATGAAAGTGCCATGGACTTTCAATTCGGTGAAGGACGCGAATGTGTGAATTGTGGGGCGATTTCGACGCCACTTTGGCGTCGAGATGGCACCGGACATTATCTTTGCAATGCCTGCGGACTTTACCATAAGATGAACGGAATGAACCGACCACTAATCAAACCGTCCAAAAGACTGACTGCCACCCGTCGGCTAGGCCTCTGCTGCACAAACTGCGGCACCCGCACCACGACCTTATGGCGACGGAACAACGACGGCGAGCCGGTGTGCAACGCCTGCGGGTTGTACTTCAAGCTGCACGGCGTCAACCGGCCGCTGGCCATGCGCAAGGACGGCATCCAGACCAGGAAGCGCAAGCCCAAGAAGCCATCGGGCGGCAGCGCAGACCGCGAGGAAGGCTCCGCCCCCAGCGACGaTACCAAATCATCAACGGTTCATCACACCCAGTCAAACCAAGGCCATCAACATACCTCATCAACTACTGTAGAAACATCAAAATCATCTTCAGAGAGACCGTATCTTGGACAAACATCACTCCTGCCTTCCACGTCGTCATCATCGACGTCTTCTTCAGGGATAAAAAGCGAGCCAGGGTACGACACCATGGCGTCATCGCAATACAACTGCCTGCAGACTCACCAGGGGTACTCCGCCTACCACCAACAGATGTTTGGGTTCTCGGCCGGCCCGCCTAGTGGCTCCGAAGTAGCGTATCATCATCAGCATCATGTGACAGCTGCGGCGAAATTAATGGCATCTTCGTAG
- Protein Sequence
- MFPSPSTSYPDSSYPQHLPQQPPVYVPSSRAVGAVGVPGQYSGSNSGHFSAPPQTSSWHADPGYTGAHSLGVANPHHGLTGQFYAQNMMMGGWRAYDTGFQRTSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPSGGSADREEGSAPSDDTKSSTVHHTQSNQGHQHTSSTTVETSKSSSERPYLGQTSLLPSTSSSSTSSSGIKSEPGYDTMASSQYNCLQTHQGYSAYHQQMFGFSAGPPSGSEVAYHHQHHVTAAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01105245;
- 90% Identity
- iTF_01105245;
- 80% Identity
- iTF_01105245;