Basic Information

Insect: Harpalus rubripes
Gene Symbol: ZFY
Assembly: GCA_963082715.1
Location: OY720448.1:76608705-76610598[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0071 1.8 11.4 0.1 2 21 69 88 68 89 0.92

2 13 0.013 3.2 10.6 0.4 2 23 111 133 110 133 0.94

3 13 4.6e-07 0.00012 24.6 1.4 1 23 139 161 139 161 0.98

4 13 1.3e-06 0.00033 23.2 0.9 1 23 253 275 253 275 0.97

5 13 0.04 10 9.1 0.8 1 22 281 302 281 302 0.91

6 13 0.0018 0.46 13.3 1.8 1 20 326 345 326 348 0.93

7 13 0.00071 0.18 14.6 0.2 1 23 353 376 353 376 0.97

8 13 4.6e-06 0.0012 21.5 0.1 1 23 382 404 382 404 0.98

9 13 2.8e-05 0.0071 19.0 5.3 1 23 412 434 412 434 0.99

10 13 0.0062 1.6 11.6 0.5 3 23 442 462 440 462 0.97

11 13 0.0006 0.15 14.8 0.2 1 23 468 491 468 491 0.97

12 13 0.0046 1.2 12.0 0.5 1 23 503 525 503 525 0.97

13 13 0.00049 0.12 15.1 0.1 1 23 590 612 590 612 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0071	1.8	11.4	0.1	2	21	69	88	68	89	0.92
2	13	0.013	3.2	10.6	0.4	2	23	111	133	110	133	0.94
3	13	4.6e-07	0.00012	24.6	1.4	1	23	139	161	139	161	0.98
4	13	1.3e-06	0.00033	23.2	0.9	1	23	253	275	253	275	0.97
5	13	0.04	10	9.1	0.8	1	22	281	302	281	302	0.91
6	13	0.0018	0.46	13.3	1.8	1	20	326	345	326	348	0.93
7	13	0.00071	0.18	14.6	0.2	1	23	353	376	353	376	0.97
8	13	4.6e-06	0.0012	21.5	0.1	1	23	382	404	382	404	0.98
9	13	2.8e-05	0.0071	19.0	5.3	1	23	412	434	412	434	0.99
10	13	0.0062	1.6	11.6	0.5	3	23	442	462	440	462	0.97
11	13	0.0006	0.15	14.8	0.2	1	23	468	491	468	491	0.97
12	13	0.0046	1.2	12.0	0.5	1	23	503	525	503	525	0.97
13	13	0.00049	0.12	15.1	0.1	1	23	590	612	590	612	0.98

Sequence Information

Coding Sequence: atggattattttattAGTCCCAACGAAGAATTAAACAATTCAATAgataaaacaaatcaaaatattgTTAGTCATGAAACTTTGTTAGTAACAGAACAAACATTTGAAGCAACAGATGACGAGAGTATGGCAGTTGAGGCTCTTCGTCAGTTAGGAGGAATGTATCAAAATGTTGTTACAACAGAACAATCATTACCTTTATTATCATGTAATGTATGCAATATAAAATTCCAAACCACTGCTGATTTACGAATACATTTGGAAACATGTACAGAGTTTCCTATAGAAGTAGAGGTAGACAataacaagaaatgttttgttactAAACTACCTTGTAAGTATTGTTTCACATATTTCGAATCCCGTATTGAAATGGAGAAACATATCCAATTAAGTCACAACAATGATCGTCCATTTGTGTGCCATTATTGCGGTATGCGATTTATCAGATCGTCAAGTTTAGCAAATCACCTCAAAATTCATAATTATGTAGCTGGCAGGGATCAAAAAGTATTAGGACCGAATCCAGATAATGTTTCGTCTTGGTCTTTTGAAAGTGTTTATGTTTCTGATAATCCTACAAACAATTCAAATGATTTGCAAACTTGGAATTTAAATTACGTtgaaaacgataaaataaataatgatacgtCAATTAAAGTTGAAGTACCAAATACACCGGAAATTTGTTTGGATGATTTTCCGGTTACCAGCATGCCGCAGATGGAAGTTACAATAGAAAACAGTAAAAAATCCCATATTTGCCCCCATTGTGGGATATCTTTTTCTCGAGAAAAAGCATTAATTTctcatattaaaatacattctATCGAATGGATATACGAATGTGATTATTGCGAACAGAAATTTccaaacgaaaatttaaaacaagaaCATCATAATACTTGCGATGCAAATAAAATTCAGAAAAATCCAATTAAAAAACCATATAAACCTCCTGTAAAAGTTGGCAAACATTCTTGCCCAGAATGCAGCAAAAATTTTGcgacaaaacaaaaaatgtttagacACTTATGGGTTCATCGGAAAAAAATGTTCACTTGTGAAATTTGCGCTGTTAGTTTTAAACTCCAATCCGAGTTAGACACTCATAGATTAACCGAGCATCCAGCGGACAGTCCTTACGTTTGTAACGAATGCGGAAAATCATTCGCAAGCCGTCAAGGTCTCTGGGAACATGGAAGACTACACGGCGCAAACACTTCAGGAATGTATACATGCAATAAATGCAACAAAACATTTTCCAGTCGTCAGGGATTTCTTATTCACCACCGAACACACACGAACGAACGTCCGTATGGTTGTAGATTCTGCTTGAAAGCTTTTAGGGACGGAGGGACGCTTAGAAAACACGAAAGAATTCACACTGGTTGTAGACCATACGTCTGTCCAATTTGCTCGCATGATTTCAATCAAAAAGTAGTCCTAAGAGAACATGTTAGGTGGGTTCACGCTGCTAATAAATCTGAAGCAGAAAATGGGGGATTTATTTGCGAATTATGCAATTTTTCAATTAGTGACAGGGAAGAACTTTGCGTACATATAGTGAAACATAGTGACCTGATTGCGCTACAAGCGAAAAATAGTGAGAGATCTTTTAACAATAGCAAAGCAGTTAGTAATTTTCTAAATGATGTGGGAAAAAAGCAGCGAAAAAAAATTGTGTCTCCGAAAATAAGTACAAATATAAAAACTGAAATAGTTGAACCTAACGATGAACAATTTGATGTTTCTAcaaatatgaattttgaatgcgAAATGTGTGGGGATAAATATTCGTCACAAAAAGATTTAATGATTCatgtacaaatacatatttaa
Protein Sequence: MDYFISPNEELNNSIDKTNQNIVSHETLLVTEQTFEATDDESMAVEALRQLGGMYQNVVTTEQSLPLLSCNVCNIKFQTTADLRIHLETCTEFPIEVEVDNNKKCFVTKLPCKYCFTYFESRIEMEKHIQLSHNNDRPFVCHYCGMRFIRSSSLANHLKIHNYVAGRDQKVLGPNPDNVSSWSFESVYVSDNPTNNSNDLQTWNLNYVENDKINNDTSIKVEVPNTPEICLDDFPVTSMPQMEVTIENSKKSHICPHCGISFSREKALISHIKIHSIEWIYECDYCEQKFPNENLKQEHHNTCDANKIQKNPIKKPYKPPVKVGKHSCPECSKNFATKQKMFRHLWVHRKKMFTCEICAVSFKLQSELDTHRLTEHPADSPYVCNECGKSFASRQGLWEHGRLHGANTSGMYTCNKCNKTFSSRQGFLIHHRTHTNERPYGCRFCLKAFRDGGTLRKHERIHTGCRPYVCPICSHDFNQKVVLREHVRWVHAANKSEAENGGFICELCNFSISDREELCVHIVKHSDLIALQAKNSERSFNNSKAVSNFLNDVGKKQRKKIVSPKISTNIKTEIVEPNDEQFDVSTNMNFECEMCGDKYSSQKDLMIHVQIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01104994;
90% Identity: iTF_00769037;
80% Identity: -