Basic Information

Insect: Harpalus rubripes
Gene Symbol: ZNF236
Assembly: GCA_963082715.1
Location: OY720448.1:103293408-103311689[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0017 0.43 13.4 2.1 1 23 154 176 154 176 0.97

2 25 6 1.5e+03 2.2 0.4 1 15 182 196 182 204 0.75

3 25 5e-05 0.013 18.2 0.1 2 23 210 231 210 231 0.96

4 25 0.0037 0.94 12.3 0.1 1 23 237 259 237 259 0.97

5 25 2.9e-05 0.0072 19.0 2.5 2 23 271 292 270 292 0.96

6 25 9.5e-05 0.024 17.3 1.9 1 23 317 339 317 339 0.98

7 25 2.1e-06 0.00054 22.5 1.9 1 23 345 367 345 367 0.99

8 25 8.6e-05 0.022 17.5 1.4 1 23 373 396 373 396 0.97

9 25 0.00099 0.25 14.1 2.4 1 23 406 429 406 429 0.97

10 25 7.2e-07 0.00018 24.0 1.3 1 23 518 540 518 540 0.97

11 25 9.2e-05 0.023 17.4 1.2 1 23 546 568 546 568 0.98

12 25 6.7e-06 0.0017 20.9 1.0 2 23 575 596 574 596 0.97

13 25 0.0006 0.15 14.8 3.2 1 23 601 623 601 623 0.97

14 25 7.7e-05 0.019 17.6 1.7 1 23 672 694 672 694 0.94

15 25 0.0014 0.35 13.7 4.4 1 23 700 722 700 722 0.99

16 25 0.0009 0.23 14.2 3.0 1 20 728 747 728 750 0.94

17 25 0.057 14 8.6 3.5 1 23 756 778 756 778 0.96

18 25 0.0015 0.38 13.5 2.0 2 21 1122 1141 1121 1142 0.94

19 25 1.2e-07 3.1e-05 26.4 1.9 2 23 1200 1221 1200 1221 0.97

20 25 9.9e-05 0.025 17.3 1.0 1 23 1227 1249 1227 1249 0.98

21 25 0.0012 0.29 13.9 0.9 1 23 1255 1277 1255 1277 0.98

22 25 0.00094 0.24 14.2 2.4 1 23 1283 1305 1283 1305 0.98

23 25 0.0049 1.2 11.9 0.5 2 23 1444 1465 1443 1465 0.96

24 25 9e-07 0.00023 23.7 1.7 1 23 1471 1493 1471 1493 0.98

25 25 0.00022 0.055 16.2 5.4 1 23 1499 1522 1499 1522 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0017	0.43	13.4	2.1	1	23	154	176	154	176	0.97
2	25	6	1.5e+03	2.2	0.4	1	15	182	196	182	204	0.75
3	25	5e-05	0.013	18.2	0.1	2	23	210	231	210	231	0.96
4	25	0.0037	0.94	12.3	0.1	1	23	237	259	237	259	0.97
5	25	2.9e-05	0.0072	19.0	2.5	2	23	271	292	270	292	0.96
6	25	9.5e-05	0.024	17.3	1.9	1	23	317	339	317	339	0.98
7	25	2.1e-06	0.00054	22.5	1.9	1	23	345	367	345	367	0.99
8	25	8.6e-05	0.022	17.5	1.4	1	23	373	396	373	396	0.97
9	25	0.00099	0.25	14.1	2.4	1	23	406	429	406	429	0.97
10	25	7.2e-07	0.00018	24.0	1.3	1	23	518	540	518	540	0.97
11	25	9.2e-05	0.023	17.4	1.2	1	23	546	568	546	568	0.98
12	25	6.7e-06	0.0017	20.9	1.0	2	23	575	596	574	596	0.97
13	25	0.0006	0.15	14.8	3.2	1	23	601	623	601	623	0.97
14	25	7.7e-05	0.019	17.6	1.7	1	23	672	694	672	694	0.94
15	25	0.0014	0.35	13.7	4.4	1	23	700	722	700	722	0.99
16	25	0.0009	0.23	14.2	3.0	1	20	728	747	728	750	0.94
17	25	0.057	14	8.6	3.5	1	23	756	778	756	778	0.96
18	25	0.0015	0.38	13.5	2.0	2	21	1122	1141	1121	1142	0.94
19	25	1.2e-07	3.1e-05	26.4	1.9	2	23	1200	1221	1200	1221	0.97
20	25	9.9e-05	0.025	17.3	1.0	1	23	1227	1249	1227	1249	0.98
21	25	0.0012	0.29	13.9	0.9	1	23	1255	1277	1255	1277	0.98
22	25	0.00094	0.24	14.2	2.4	1	23	1283	1305	1283	1305	0.98
23	25	0.0049	1.2	11.9	0.5	2	23	1444	1465	1443	1465	0.96
24	25	9e-07	0.00023	23.7	1.7	1	23	1471	1493	1471	1493	0.98
25	25	0.00022	0.055	16.2	5.4	1	23	1499	1522	1499	1522	0.97

Sequence Information

Coding Sequence: ATGAATATAAGCAACGCAGTTcctattatacaaaataatgaGAATGAAACTATAACATTACTAGCCTTGCCATTGAATATTTTACAAGCACCGCAGCCCATTCTAGTTGATCAAAATATATTGCTAAAAACCTTGGATGGAActttagttttaaatactaatcaGTTTGTAAATGGAAATAGCAATATAACGTTAACGACTGCAACAGAGcctttatgtaataataaagtattaagtaatacaGAATCTGTAATTTATACGATACAGCAAAAAGTTGATGAACCTATTGAGTTGTCATCAagcgaagaaaaaaataaatctgAGAATTCTGCACCaaaggataataaaaataagcACAAAGTTCGATTTCTTAACAACAAATCAGTTCTAGATATCCGAAAAGTTGGTAGACCTCGTAAAGATAATACGAAAGTTAAGCAAGTGGAAGAAAATGGCTCTTTTAAATGTAATGTCTGCGAAAAAGAATTTGATAAATATGTGTTATTGAAAAAACAtgaaaaatttcatcaaaatgagaaaaaatataaatgttcgTCGTGCCCTGCTTCATTTAATATCATAtcaaaCCATAACTTGCATTCAGCAATTCACAAAACAGAAAATCCAACATGTCCCGAATGCGGCAAAAGATTCCAAAGAATTGCAAGTTTAAAAGCTCATATAGCGTACCATGAAAAAACGGAAAATTTTTATTGCGAAGattgtgatattttatttaataatgagGCGGAAATGAATGACCATATAAAAGAACATGGGCAAGATAAAAAGATTGAAGAAGATGCACTACAGTGTAAATATTGTCAACTTTCTTTTACAAATCAAACAGAATTTAAGAAACACATGAGTGAACATAACAAAaTGAGAAGTATATTACAAACAACGACTAGGAAAAAACCTAAAAAGACTATCGCTATTGAGAGGAAACATGAGTGTAATATTTGCTCCAAAGCATTTCAAAAACGAAGTCAAATTGAAAGACATTTGAGGGTCCATAGTGGAGAAAAACCTTATAAATGTAAAACATGCAATAGAGGCTTTAGTCAAAAAGGATCACTTCAAATTCATATGAGTCGTCATACTGGTGTTAGACCACATAAATGTGCACTCTGTCAAGCTAAATTCAGTCAAAAAGgTAATCTACGAGCACATATTTTAAAAACCCATTCAATTCCGTCTAGCGGCGAAAACGTATTTTCTTGCACCGAATGTTCGTGTGTTTTTAAACGCCTAGGAAGTCTCAATGGTCATATGACTCGCAATCATCCTAAAGAGAAAAACAGCGATATTAAATTCGTCATGTCGCAACTAGTCGCCATGCAAAGCAATAATATGATCGTAGATAATGACATTCTGCAAGAAGCAATTCTTAAATCTGATCTCCCGGAAGTCCAAAACCAAAATCAGTCACAAAACCAAAATAATGAGAAAACTCCATCTGCTACTTACGTAACTATAGCTGATTTGACTTTAGAAGGGAATATGAGAAGACTTGTTATTAAGCAGCGGAAAGTTGGAGATATTCGATGGCATATATGTAATTTCTGTCCAAAGGAATTTAAAAAGCCATCTGATTTAATTCGACATATGCGAGTTCATACAAGAGAGAAACCTTTTGTtTGTAAATTTTGTAATCGATCTTTTGCTGTAGAATCAACTCTAATATCTCATTTCAGAACACATGCTAAATGTACAAAAGTTCAGtgcaaatattgttataaatttttcagttcTTGGACTAGCCTTAATGCACATATGCTGAATCACACCGGACCAAAACACAAATGTTCAGTATGCAACAAATCATATCGAAGTCTCGCAAAATTAAATCAACATTTTCagattcatttaaataataattcacCTTATCATAAAGAACCTAGTAGTAATGTTATTATGTTACAACCCATTCAAATCACAAAACAagGTCTTCAACCTGCGATCTCGATAAGAAAACGGCCTTTGACTGAAGCAGGGTTCAGAAACCGGCCCTATATGTGTAAAGTGTGTGGAGCAGCATTTAAAAGACTCAGTCATCTTAAGCAACACAATGTCAAACATACTGGTGAACGGCCGTATAGGTGTCATTTATGTTACAGGAATTTTACGTCAAATAGCATATTAAAAACTCATATTCAAACTCACAATGACTCAAAACcatataaatgtataatttgcCAAAAAACTTTTTCAACAAATGGAAGTTTAAAACGACATTTGGAATGTCACAGTAGCATAAAACCATACTTATGCCCCTATTGTTTCAAAGATTTTAAGAATCTTTTGCAATGTAAAAAACATATGCTGGTACATAACttggaattaaatttacaaatggAAACAAATGAAGAGTTAGCAAATACAGAATTATTAAATAAGGAGAATGATTTGTGTTATCCTGCGGATTTGGCAGATACTTTAGTGGATGAATCATTTGCTTTGGTTCCTCCCCTGGCACCATCAACTTtggaagaaaatgaaaaagatGTGGACATAGaTGGAGTACAAACACCACCACCAGTACTTACCACTCAAACTATACGAGCAGATGAAAATGGAACTGTCGTATTACCAGTTATTGACAACCAGGAAAATTTATCCCAAGAAAGTATACAAGAACTAGAAGATACCCTCAATACCCaaatgctaaatataattggTAGTGAAAATTTCGATACTtcttatattaacaaaataactGAACCAATTTCAACTACGGATGAATTAGTTAATACTTTATCAGGAAATACAGATACAGAGAAATCTGTTGATAGTCAGTTTATATACCATCAAGTTATTGTTAATTTGAATCCTGAAACAGATCAAATGCCAATATTCGACAACAATGGAATCGATAACATATTAAAACAAGTTAAATTACAAaATGACTCTCTTTTCTTAACtgatttaaattcattaaatattaatcCAAACGAAACTAATAATGTATTATTACCGTTTCAAATTGCACCTCAACAAGATTTAACACAAAATCAGTTAATAATGTTACCTCCAGATATAGAACCAGAAATGCAAAATGCTACATTAAATCCTTCCATTAGATTGGAAAATATTGATCAAAATTTGCAGCTAAAATTAAACGGTCTTTTAAACTCATCTCAAAATATTTCTAACACAAATATAATCATAAACAACTCACTAATTGAACCACAGacaacagaatttttaaatgcAGAAGAAGATCTGGTAAATGATTCTTTATCAGATGTAAAAGTACCAGCAAAATCTATTAAAACCAATATTATAACTGACGTAATATCAACGGATAATCAAATTACTGCAGTAATTCCTACCgatatagttacaaaaaattcaaatataacaTGTAACTTATgcaacttaaaatttaaaaccaaaaCTGATTTGAAAGTACACCAGTGTTTAAATATTATCAATGTTGAAGTTAGTGACAAcattgaaaataatgataaCGAAACAAGTGAAGCTCAAGAATCTTTCAATGGAAATGTGACAAAAGAAGTATTCGACGAACTTGTTGCCCAGAAAGAAAAGGATCCTCTCGCAATGAAAAAACCTGCACCTGTGTACAAAAATTCCTGTACATATTGTCCAAAAACTTTTCGAAAACCTTCAGACTTGAAAAGACACCTTCGAACCCATACTGGGGAAAGGCCTTTCAAGTGTGATGAATGCGCCAAAAGTTTTTCCCTGAAATCAACTTTAGAAAGTCATAGTAAAATACACCAAGGCAAAAAAGAATTCACTTGCCATGtttgtaatagtttatttgCTACCAAAGGAAGTTTAGGTGTCCATATGCGATTGCATACTGGAGTTAAACCGTTTAAATGTCCGTTATGTCAATTAAAATTCCGCACTTCAGGACATCGAAAAGCACATTTAACTGTACATTACAAAGAAGCTATAAGAACAGGCAAAATAATTTCAGACGTAGTTACGAGAAAGGCAAAAATTAGCGAATTGATGGAAGGGGTACAAAGTATGATAGAGCATGAGAAGCAAAAGGATGCAAATGAAACACATTTACCAATAGAAGATCCTGTTGTTCCTCCACCGCAGTCAGTTGTTAATAATATCGTTTTACAGACAGATGAAAAACCTTTAATGCATTTTGAAATCGAAACAAATACACAAGGACAAATAATTAATATCAAACCTACAGCGTCCAACGTTTTATTTGTTGAAGATTCCAAAGAAGAAGTTATTTCAACCCAAGTTAATTTTGACgagaaaacaaaaatacaaatagaaAACTTTTTGAGGGACAAAAAAGCGAAACAACAAGTTCaaaatagagttaaaaaagtTTGTGAAGTATGTTATAAAGAATTTGGGACAAAGTATTTATTAGATAGACATAGTAAAATTCACACTGGTGAAAggatattttcttgtaattattgTTCAAAAACATTTAACCAGAAAAATGCATTACAAGCTCATGTTAGAACGCATTTTGGTAGTAGACCTTACTGTTGTCCCTACTGTAGCAATACGTTTAGCCAATGTGGAAATTTGAAAACGCATATTAAAAGGATACACAGTAGCATTCAGAATAAAGATACGACCAACTCAGGTTTAATAATGCCAGATATTCTCAAAGCAGGAAATGTAGGTCGGTAG
Protein Sequence: MNISNAVPIIQNNENETITLLALPLNILQAPQPILVDQNILLKTLDGTLVLNTNQFVNGNSNITLTTATEPLCNNKVLSNTESVIYTIQQKVDEPIELSSSEEKNKSENSAPKDNKNKHKVRFLNNKSVLDIRKVGRPRKDNTKVKQVEENGSFKCNVCEKEFDKYVLLKKHEKFHQNEKKYKCSSCPASFNIISNHNLHSAIHKTENPTCPECGKRFQRIASLKAHIAYHEKTENFYCEDCDILFNNEAEMNDHIKEHGQDKKIEEDALQCKYCQLSFTNQTEFKKHMSEHNKMRSILQTTTRKKPKKTIAIERKHECNICSKAFQKRSQIERHLRVHSGEKPYKCKTCNRGFSQKGSLQIHMSRHTGVRPHKCALCQAKFSQKGNLRAHILKTHSIPSSGENVFSCTECSCVFKRLGSLNGHMTRNHPKEKNSDIKFVMSQLVAMQSNNMIVDNDILQEAILKSDLPEVQNQNQSQNQNNEKTPSATYVTIADLTLEGNMRRLVIKQRKVGDIRWHICNFCPKEFKKPSDLIRHMRVHTREKPFVCKFCNRSFAVESTLISHFRTHAKCTKVQCKYCYKFFSSWTSLNAHMLNHTGPKHKCSVCNKSYRSLAKLNQHFQIHLNNNSPYHKEPSSNVIMLQPIQITKQGLQPAISIRKRPLTEAGFRNRPYMCKVCGAAFKRLSHLKQHNVKHTGERPYRCHLCYRNFTSNSILKTHIQTHNDSKPYKCIICQKTFSTNGSLKRHLECHSSIKPYLCPYCFKDFKNLLQCKKHMLVHNLELNLQMETNEELANTELLNKENDLCYPADLADTLVDESFALVPPLAPSTLEENEKDVDIDGVQTPPPVLTTQTIRADENGTVVLPVIDNQENLSQESIQELEDTLNTQMLNIIGSENFDTSYINKITEPISTTDELVNTLSGNTDTEKSVDSQFIYHQVIVNLNPETDQMPIFDNNGIDNILKQVKLQNDSLFLTDLNSLNINPNETNNVLLPFQIAPQQDLTQNQLIMLPPDIEPEMQNATLNPSIRLENIDQNLQLKLNGLLNSSQNISNTNIIINNSLIEPQTTEFLNAEEDLVNDSLSDVKVPAKSIKTNIITDVISTDNQITAVIPTDIVTKNSNITCNLCNLKFKTKTDLKVHQCLNIINVEVSDNIENNDNETSEAQESFNGNVTKEVFDELVAQKEKDPLAMKKPAPVYKNSCTYCPKTFRKPSDLKRHLRTHTGERPFKCDECAKSFSLKSTLESHSKIHQGKKEFTCHVCNSLFATKGSLGVHMRLHTGVKPFKCPLCQLKFRTSGHRKAHLTVHYKEAIRTGKIISDVVTRKAKISELMEGVQSMIEHEKQKDANETHLPIEDPVVPPPQSVVNNIVLQTDEKPLMHFEIETNTQGQIINIKPTASNVLFVEDSKEEVISTQVNFDEKTKIQIENFLRDKKAKQQVQNRVKKVCEVCYKEFGTKYLLDRHSKIHTGERIFSCNYCSKTFNQKNALQAHVRTHFGSRPYCCPYCSNTFSQCGNLKTHIKRIHSSIQNKDTTNSGLIMPDILKAGNVGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00769000;
90% Identity: iTF_00769000;
80% Identity: -