Hrub051562.1
Basic Information
- Insect
- Harpalus rubripes
- Gene Symbol
- -
- Assembly
- GCA_963082715.1
- Location
- OY720458.1:25330265-25331353[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2e-09 4.9e-05 25.3 2.9 3 114 10 115 8 117 0.83 2 3 3.2 4.8e+04 -3.7 0.0 62 84 184 206 179 211 0.49 3 3 3.4 5.2e+04 -3.8 0.0 8 26 288 306 286 323 0.70
Sequence Information
- Coding Sequence
- ATGGATTCTTCAACAATTTATATGAAATCTAACACATGGCTTtctattgaagaatattttgatattttatcaaGACTCGACGTAGAACGATGTATTGATACGCCACCTGCTAATCCAAAACCTGGtgaaatttttgtttacaaaaataataaaaaaagactAGATTGGAAGTCTGATCAATATAGATGGCATCACATTGGAACTAAAAATGTGCCTAAATCTTGTCCACTTGTTAGATGTCATTATTACAAAACTTACGCAGGTTACGGTTTTGAAAGAAGGGCTTATAATTTATACGGTGACGGTGATAATGATTATCAGGAAGTAACACTTATCCACTATGTTGGTTCTCTTAAAAACGTTATTCATTCTTGTCATGGTAATAGAAAATCCCATCTTCATGTTAAACATGTAATGACTGCAAAGTCGCAAATATCCCAACAGAAATCAGAATTGTCGTCTGCACCTCacgaaatttacaaaaaattaatgaatgaGGATGTGCAACCTGTTGTTTGTCCAGTATTATTGCCTAGAAATAGGAAACAAGTAAGCAATACTATTGCAAAAGAACGGGAGAGAAAACTAGTATCTAGTGACGATATTATAGGTGTGTATTTATTAAACGAAGAATTAGGTGGTTTTATTAACAAGCTGGAACTActaccaaatttttattttatattgtttagtGATTCCACAATCAACTTTTTTGCGAAAGCTGCAAGTGTTTCAAAATGTACACTTTTTTATGATACAACGTTTAATTTAGGTGATTTTTATGTTTCCACTCTTACATATAAACATTCTTTATTTGACAATGGACCAATTATTCCAATTATGCACTTGGTTCATCATAGTAAAAAGAAGGAAGTACATGAATTATTCTTTTCTTATGTGAAGGAAAAATGTCCATTCATAGAAAACCATGTAATTGTAACTGATAGAGAAGCTGCAATTATTTACGACATAACAAATGCATTACCAAAAATGACACATTTCTTTTGTTGGAATCACATTCAACAAGATGTAAAAAACTGGATTCTGAAACATAGAAATACTAATGTAATGGATGTTAAAGTCCTATAA
- Protein Sequence
- MDSSTIYMKSNTWLSIEEYFDILSRLDVERCIDTPPANPKPGEIFVYKNNKKRLDWKSDQYRWHHIGTKNVPKSCPLVRCHYYKTYAGYGFERRAYNLYGDGDNDYQEVTLIHYVGSLKNVIHSCHGNRKSHLHVKHVMTAKSQISQQKSELSSAPHEIYKKLMNEDVQPVVCPVLLPRNRKQVSNTIAKERERKLVSSDDIIGVYLLNEELGGFINKLELLPNFYFILFSDSTINFFAKAASVSKCTLFYDTTFNLGDFYVSTLTYKHSLFDNGPIIPIMHLVHHSKKKEVHELFFSYVKEKCPFIENHVIVTDREAAIIYDITNALPKMTHFFCWNHIQQDVKNWILKHRNTNVMDVKVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -