Hrub011977.2
Basic Information
- Insect
- Harpalus rubripes
- Gene Symbol
- -
- Assembly
- GCA_963082715.1
- Location
- OY720449.1:49188187-49190987[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-13 9.2e-09 37.3 5.6 2 114 15 119 14 121 0.89 2 2 2.9 4.5e+04 -3.6 0.1 10 34 137 160 128 167 0.54
Sequence Information
- Coding Sequence
- atgactaacaCGTCAACTACAAGTTTCAACGAAGTATTTAACTTTTCTGAACATTGGTTAAGTGTTGATGATTATTACAACATTTTAAAGAATGCAGATTCCCATAAATGCTTCAAAGGTCCTCCTGTAATGCCGAAACCAGGAgagatatatttaataaaaaatgataacATAGAAGATTGGAAGTCGGACCAGTTTCGTTGGCGTCATAAGGGCACTAAATATTTACCTCCATCTGAGCCGAAATTAACATGTTACTATTATAATACTTATGAAGGACATGGGTTTCAAAGACGTGCTTACATGTTATAtgaacaaaaaagaaaatatgcgGATATAACATTAGTGCATTATGTCGGTTCACTAAAAAATGTTGTACATGATTGtcataaaaatagaaaatataacacgGATGTAAAGCACATAATGACAGCAAAATCTCAACTTAAacaacagaaaaataaattatctgaACAGCCGCAAGAAGTATATAAAAAACTTAGTTGTGAAGATGTTCATCCAAGTCATATGCCGGTGTTACTTCCACGGAATAGAACGCAAGTAAGTAACACAATTATAAAAGAAAGAGAAAGAAAACTTCTTTCCCAAGATGATATAAATGGGTTATACATGCTGAATGAAGAACTAGGAACATACATTGCAAAAATGGAATTATTACCGGAGTTTTATTGTATTCTGTGCCATGAAGATTCCATAAAATTATTCGCTGAAGCATGTCAAAGTCACgactgtattttatattacGACACGACATTTAATCTTGGTGACTTTTATCTTTCTGTCCTGACATACagtcatataatttttaaccagGAACCTGTTATtccattaatttatttaatacaccACCGAAAAACCAAAGAAATTCATGATGGCTTTTTTCAGTTTATTAAGAAATCGTTCCCttgtataattaataaatgtataataacaGACAGAGAAGCggcaataatttttggaattaaaaATCAACTTCCCAGTAATCCTCACTTTTATTGCTGGAATCATATACAGCGGGATGTGAGACATTGGCtcatgaaacaaaaaaattctgagATCAATGATGTTAGCACTTACGTGAGTCATACGTGGGATTTATTGGACAGTgatactaaaaaaaattgtttccaaaaatatgaaaatatgaaaatacacTGGagcaataattttaaacattatttcgacaataatattaaagatgCTGTACTTTCGAGTGGTAAATGGAAATTACAAGAAATTGGTATCTATAAAGAAAGAAGTGGAATTACCATAAATCCAGCAGAAAGTTTTAATGCTGTTTTGAAAAGAATGTTAAAACAAAATGAAGTAAAAACACAGGTTCTTGCAATTTCGTTATACCAATTAGATTTATATTATCGAAAAGAAATATTAAGAGGGTTTTGTAATACtggaaattttaaattaaagaataaatataaatatttacaaaagaaTTTACAGGAGATAGTTTTTCCACAAAACCAtttaccaatagaaaatttgccatatattttccaaaataaagACTATAAAGGACGTAAAACATGTAATGAGATcccatttacaaattttagtatAGCTAAACTACTTGTTATGCAAGGATGTGTAAGACTTATACCTGATGAAcaagtttttataataacatcaaataaTGGTGAAAAATATATGACTAAACTTTATCCAAAAGAAATTTGTACCTGTAAAGCGAAACGAGGATGTCACCATATTAAAGCAGCTAAACTTTCAATCGGCAATGAAAAACAAGAACAAAAAGATGTTAAGTTATCTACAATTATGAAGCGAAATAGAGGACACAGATCTGGAagaaaagtaattaatgttcCTAAAAACATAACTGTTGTGGAAGCTGCAGATGATTCGTTAGTGCAGGGTCAAAAACATTTATCTCAAAATTCACTATTAATTCCTACGGTTATACCATCTAATGGATTAGTGAAAAAGAGATTTCTCACTCCTAATTCCAGTGTCAATAAAAACCTATCACCTGTTGCTGATAAATTCTTACCAAAAATTACTTCAACTCCTGAGAAATCAGAGTTTcttaatattagttatttttgtgAACCTGACGATAGATCTGttcaaaataaaagaacaaagagaaaaaaaataatttgtatatcaTCCTCTTCCAGCGACGACGACttttataatactttttctgaaaaattttaa
- Protein Sequence
- MTNTSTTSFNEVFNFSEHWLSVDDYYNILKNADSHKCFKGPPVMPKPGEIYLIKNDNIEDWKSDQFRWRHKGTKYLPPSEPKLTCYYYNTYEGHGFQRRAYMLYEQKRKYADITLVHYVGSLKNVVHDCHKNRKYNTDVKHIMTAKSQLKQQKNKLSEQPQEVYKKLSCEDVHPSHMPVLLPRNRTQVSNTIIKERERKLLSQDDINGLYMLNEELGTYIAKMELLPEFYCILCHEDSIKLFAEACQSHDCILYYDTTFNLGDFYLSVLTYSHIIFNQEPVIPLIYLIHHRKTKEIHDGFFQFIKKSFPCIINKCIITDREAAIIFGIKNQLPSNPHFYCWNHIQRDVRHWLMKQKNSEINDVSTYVSHTWDLLDSDTKKNCFQKYENMKIHWSNNFKHYFDNNIKDAVLSSGKWKLQEIGIYKERSGITINPAESFNAVLKRMLKQNEVKTQVLAISLYQLDLYYRKEILRGFCNTGNFKLKNKYKYLQKNLQEIVFPQNHLPIENLPYIFQNKDYKGRKTCNEIPFTNFSIAKLLVMQGCVRLIPDEQVFIITSNNGEKYMTKLYPKEICTCKAKRGCHHIKAAKLSIGNEKQEQKDVKLSTIMKRNRGHRSGRKVINVPKNITVVEAADDSLVQGQKHLSQNSLLIPTVIPSNGLVKKRFLTPNSSVNKNLSPVADKFLPKITSTPEKSEFLNISYFCEPDDRSVQNKRTKRKKIICISSSSSDDDFYNTFSEKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -