Hrub004040.1
Basic Information
- Insect
- Harpalus rubripes
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963082715.1
- Location
- OY720448.1:18735635-18738043[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-17 2.1e-14 55.2 0.1 1 45 11 56 11 56 0.96 2 2 1e-17 6.4e-15 56.9 0.0 1 43 390 433 390 435 0.95
Sequence Information
- Coding Sequence
- ATGTCAACGGTAGGCGGGCGGCGCACTTACACGGAGGAAGAACTGCAGGCAGCGTTGCGCGACATTCAAAGTGGCAAGCTTGGAACCCGCCGAGCGGCTGTCATCTACGGCATCCCGCGCTCCACGTTACGGAACAAGGTCTATAAACTAGCCATGGAACGCGAGAGAGAATCACATCTCGCGCCACTCGCTGACGAAGATGTCATGGACTACGAACGCGAACTCTCGGGTGCCGAAGAAGAGAAGGAGGTAGAGAAAGCCTTACAGGGTCCGTTAGTATCGATGGACGACATCGTTAGGTTTGCTGATTCGCCAGAAGCACTGCGCACTTTACTTAGGCAGCAACAGTTAAAAAGTGGCAATGGAAAAGAAGAACAATGGGAAGCCTTAGATCATAGTGCTTTAGGTCCTTACATTCAACTTATGATGGCAGAACAATTAGCAGCCAAGGATCCTGCTCTAATGCCTATCTTACCTGATTTTATGCGTAAGGTCATTGGCGACGAACAACACGTGAATAATGGCGAAAACGAAACCAAGACGCAACTACCACCGCAATCGAGTCCATGTAActcaattaaaacaaaaacggaCTCGTCCGACATGGACACTGAAGATTCACCTGCCAATGTGATACTGAAAATTCCGTCCTTTAAACCCACTACTAGTAAGAATGGTGGTGACACATACCGAAATGATACCGGTTCCCTAGCGTCTCCACCCGTCACTAGTGAATCGGGATCACCACCAATCGTTACGAGCAGTATGTTATCGTTGCGTGAGGCAATTGCCAAAAGTATCAGTCAAAAGTTTCAACAGAATCCGGGTCCTGAACCACTAATACGTCACCCAACGCCAATTGACATTGATTATAAACGTGTAGGTATTACACCACCTTTAGTTGGTTTATCTCCTGCCATGAAGAACCCTCATCATCCGCCTCAGCCGACACCGGAACCAGTTACGCCACCAACTGTCACACCCCCTTCCGGCTTACCACCAGTGAGAAGCTTTCAGGGAACAGCCTCTGTGGTCAAAAACAATGCTACCAACTCACATTCACACACGCCAGGTAATAACAACAGTACAAATAGTAGTAGCGGCAGCGGCGGAAGCACGCAGGGCGGGAAAGGGACACGTCCCAAACGTGGCAAGTATCGGAACTATGATCGCGATAGCTTGGTCGAAGCAGTGCGGGCTGTTCAACGAGGAGAGATGTCTGTACATCGTGCTGGCAGCTACTATGGCGTACCTCATTCAACATTAGAATATAAAGTTAAAGAACGTCATCTCATGCGGCCACGAAAACGCGATCCTAAACCCAACCCCGTAGATGAGAAAATTGCTTCTTTAAAAAGTCAAGAGATACGTAACATTCCAGACAAAATGAAATCTGTGATTAAACCACCTCAGAAATATCCACCTACTTCTCCCAATGGTATCAAAATGCCAGCAATGTTTGACCCCACAATGGCATCATTGGGATACACACCACCACCACCATTTTCTTTCTGGCCACACCCGCAATTCCCACATCTACCCCTTGAGTATCCTCGAAACACACCATCTTCTCAATTTCCCACCAGCCCTGATTTCTTCGCATCGCAGATGATGCAACAGCTACAAGAGCGTTCAGGACGTTGCCATGGGGAAGGAGCTGGATCTGGCTCTGGATCTGCAACTGGAACTACAACCACACCTACAACTGCAGCAGGACCTGCAACTGGACCTGGTGCTACGGCCGTAGGAGGAGCGAATGGTACCAGTGGAGGTCTTGCTAAAAGTGCTCGTGAGATGGCTGAATCACTTTATGATGGAACAGGTGCAAATGGTTCCTTTCTTGATGGTATTATCCGCTCCAGTTTAGATTCAGGTGTACCTAGTATTACGGACAAAGCAAATATCAAGGAAGAGAAGAACGTAGCTCCCGAAAACATGTCAAATAAGGCACTCCTTGACCAGTTATGTAGAAACAGTCGCATTACTCCACTGTCAAAATCAACAAATGTCGAAGCTAACAGCTCAGGTGATGAAGCGAGCCCTTTGAACTTTGTCAACAAACAAGATTTAAGTGTGGATAAATCGCGCGATCGTGATCGTGATGACATCCAAACCATTGAGCTGTGCAACGATTCGAACGAGTCAACGGCAGCGGCGCCAACGGGAACAAGCAGCAAGGAAGAGGAAGCGAAAGAGTCACCACCACCACCACCGTCACGCATCTACGTGAAGCCACAATTCCAGGAGCTGACGAAGCCTGAGAATTTGAAACCTGAAGTCCTGGTGCGCTTCAGAAGTACAGGCGATGATTGTGAGCCGTGCGCGATCGCTATGCCTGATAGCAATGGGCTCAGTGTCGTGCTTGACACGGGAAGTGCCTCTGAGAAACCAGACGTGGCCCAAGACTGA
- Protein Sequence
- MSTVGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERESHLAPLADEDVMDYERELSGAEEEKEVEKALQGPLVSMDDIVRFADSPEALRTLLRQQQLKSGNGKEEQWEALDHSALGPYIQLMMAEQLAAKDPALMPILPDFMRKVIGDEQHVNNGENETKTQLPPQSSPCNSIKTKTDSSDMDTEDSPANVILKIPSFKPTTSKNGGDTYRNDTGSLASPPVTSESGSPPIVTSSMLSLREAIAKSISQKFQQNPGPEPLIRHPTPIDIDYKRVGITPPLVGLSPAMKNPHHPPQPTPEPVTPPTVTPPSGLPPVRSFQGTASVVKNNATNSHSHTPGNNNSTNSSSGSGGSTQGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKSQEIRNIPDKMKSVIKPPQKYPPTSPNGIKMPAMFDPTMASLGYTPPPPFSFWPHPQFPHLPLEYPRNTPSSQFPTSPDFFASQMMQQLQERSGRCHGEGAGSGSGSATGTTTTPTTAAGPATGPGATAVGGANGTSGGLAKSAREMAESLYDGTGANGSFLDGIIRSSLDSGVPSITDKANIKEEKNVAPENMSNKALLDQLCRNSRITPLSKSTNVEANSSGDEASPLNFVNKQDLSVDKSRDRDRDDIQTIELCNDSNESTAAAPTGTSSKEEEAKESPPPPPSRIYVKPQFQELTKPENLKPEVLVRFRSTGDDCEPCAIAMPDSNGLSVVLDTGSASEKPDVAQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01104175;
- 90% Identity
- iTF_01104175;
- 80% Identity
- -