Basic Information

Gene Symbol
DBT
Assembly
GCA_030770355.1
Location
JASTWR010000140.1:227297-232274[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-12 1.7e-09 38.6 0.0 4 39 54 89 52 93 0.92

Sequence Information

Coding Sequence
ATGCCCCTTAATATGGCACTGTTTAAGGACATAACGGCGCTTTGGAGTTTGGTCCATGGGATACTGTGCGGCAATCGTGGCGCAGAAGCGAGGTTATCGGTTCTTCAAATGGTTCGAAATTATAAAAGGAAAACCGAGAGGCAGAGTTGGAATAAACAATCGATGGATAGAGCTGTATCTGCTTGCATCGAGGGAAAAATGGGCTATCGTAAAGCTTCTCTTAAGTTTGGAGTTCCCAAGACGACTGTAGAACGATATGTTAAAAGAATGAAGAACAGTTGTGACAAAGTAGTCAAAGTTACAAAAACAGGTGCTTTTAAAGCAGTGTTAACGGAAGAACAGGAAAAGAAGCTCTGTGAATATGTGATTAACATGCAACAAAGACCTTTTGGCCTAACTTCCACAGAACTGAGGTCATTGGCTTTTCAACTGGCCGAGAAAAATGGTTTCAATCCTTTTAACAAAGAAACTCAACTGGCTGGTGTAGATTGGCTAAATGGATTTCTGCAGCGACATCCAAACATTTCCTTCAGAAAACCTGAAGCAACATGTGCCAGAACCATAGACTTCAATAAAGTTTCAGAGGAAAATTATTTCGACTTATTGAACAATATCGTTGAGacaacaattaatataaaagcaGACAGCGTGTTTAATGTCGGTGAGACAGATGTAACAGTCAATCCAGAGCATCATTCTCGAATACTGGCTCAGGAAGGTTGTCGACAAGTAAATAATAGGCAGTATAATGAGTCCGAACGATCGTGCGACCCGGTACGCCGACTTTTGTCTGCAAGCTCGTTTCTCTCCGGCAGAGTGGTACCCTTCAATTTGACGGACATCGGCGAGGGAATTCGAGACGTCACGGTGAAAGAATGGTACGTGAAACCGGGGGACCGGGTGAACCAGTTCGACGACATCTGCGAGGTGCAGAGCGACAAGGCCTCGGCGACAATCACGAGTCGCTACGATGGTGTCGTCAAGGCTCTCCACTACAAGGTAGACGACGTCGCGATGGTCGGTTCGGCGTTGTGTGACATTGAGATAGAAGACGACTCGATGGTCGGTTCGGCGTTGGGTGACATTGAGATAGAAGACTCGAAGTACACTACGAGCTACGACGCGGGAGAAACCGTAAAGAGCGAGAATCAAGAGACTGACAATTCGGAGAATAAGGAGAGGGAAATAGGCGAAGTCAGTCAGACGGAATCAGAGGACAACATCTTGGGGAAGGTATTGGCAACTCCGGCGGTGAGGAGGATAGCCAGAGAGACCAACATAAAATTGAAAGACGTAATAGCGACTGGCAAGGGAGGAAGAGTGCTCAAGGATGATATCCTGGCACATCTGCAGAAAATTTTTCCGGAAGTTAAAGCGGAAGTTCTGTCGCCGAATGTGACGGGAAGGACGATCGGCCTTAAGGGATACTCGAGACACATGTGGAAAACTATGACGAAATCTTTGAGTATACCGCACTTCGTCTACAGCGACGAGTGCAACGTGGACGAGGTGATGCGCTACCGAAACGAAGTGAAGGGCTCTTTGATGGAACAGGGGGTCTCTCTGACTCTTTTGCCGTTTTTCATAAAAGCGGCCTCGCGGGCGTTGGAACAATGCCCCACGTTAAACGCCTGGATCGACGAGGAAAGCCAAACGCTGCGGGTCCTGGACAACCACAACATCGGCATCGCCATGGACACTCCGGAGGGCCTGGTGGTGCCGAACATCAAGAACGTGCAGAATCTCAGCGTTTACGCGATCGCGCGCGAGCTCAACAGGCTTCAGGAGTGCGGTCGCAAGTCATCGATACCGCTCGCCGATCTGACCGACACGACCTTTTCGTTGTCCAACATAGGCGTGGTCGGTGGAACGTACATGAAGCCGGTGATCCTGCCGCCGCAAGTGATAATCGGTGCATTCGGGAAGGCGCAGAAGCTGCCGCGATTCGATGACAAGGGGAATGTAGTTCCGGCCAGCATAATGTCAGTCAGCTGGGCCGCGGATCATCGCGTCGTCGACGGCGTAACGGTGGCGAAGTTCTCCAACTTGTGGAAGCATTACGTGGAGAATCCGGCGCATCTACTGATCGGCGCGTGA
Protein Sequence
MPLNMALFKDITALWSLVHGILCGNRGAEARLSVLQMVRNYKRKTERQSWNKQSMDRAVSACIEGKMGYRKASLKFGVPKTTVERYVKRMKNSCDKVVKVTKTGAFKAVLTEEQEKKLCEYVINMQQRPFGLTSTELRSLAFQLAEKNGFNPFNKETQLAGVDWLNGFLQRHPNISFRKPEATCARTIDFNKVSEENYFDLLNNIVETTINIKADSVFNVGETDVTVNPEHHSRILAQEGCRQVNNRQYNESERSCDPVRRLLSASSFLSGRVVPFNLTDIGEGIRDVTVKEWYVKPGDRVNQFDDICEVQSDKASATITSRYDGVVKALHYKVDDVAMVGSALCDIEIEDDSMVGSALGDIEIEDSKYTTSYDAGETVKSENQETDNSENKEREIGEVSQTESEDNILGKVLATPAVRRIARETNIKLKDVIATGKGGRVLKDDILAHLQKIFPEVKAEVLSPNVTGRTIGLKGYSRHMWKTMTKSLSIPHFVYSDECNVDEVMRYRNEVKGSLMEQGVSLTLLPFFIKAASRALEQCPTLNAWIDEESQTLRVLDNHNIGIAMDTPEGLVVPNIKNVQNLSVYAIARELNRLQECGRKSSIPLADLTDTTFSLSNIGVVGGTYMKPVILPPQVIIGAFGKAQKLPRFDDKGNVVPASIMSVSWAADHRVVDGVTVAKFSNLWKHYVENPAHLLIGA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00884995;
90% Identity
iTF_00884995;
80% Identity
-