Haxy018983.1
Basic Information
- Insect
- Harmonia axyridis
- Gene Symbol
- stc
- Assembly
- None
- Location
- chr4:26449406-26467984[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.9 2.5e+04 -4.0 3.0 6 10 329 333 325 333 0.61 2 12 0.13 1.7e+03 -0.3 0.3 4 10 359 365 358 365 0.94 3 12 2.7e-05 0.34 11.5 12.5 3 19 373 389 372 389 0.92 4 12 1.5e-08 0.00019 21.8 11.2 1 18 425 442 425 443 0.97 5 12 6.1e-06 0.079 13.5 17.0 1 19 483 501 473 501 0.85 6 12 7.9e-09 0.0001 22.8 13.6 1 18 541 562 541 563 0.88 7 12 0.91 1.2e+04 -3.0 1.6 5 10 589 594 589 594 0.93 8 12 0.027 3.5e+02 1.8 12.1 1 11 600 610 600 622 0.91 9 12 1.8e-09 2.3e-05 24.8 12.2 1 18 627 644 627 645 0.98 10 12 0.00045 5.7 7.6 13.8 1 19 684 701 684 701 0.89 11 12 4.8e-09 6.2e-05 23.4 14.3 1 19 737 756 737 756 0.97 12 12 0.0025 32 5.2 14.4 1 18 766 784 766 785 0.92
Sequence Information
- Coding Sequence
- ATGTCGTTGCAGAATTACCAGCCAACTGGGTATTTTAATGAAACAGCAAATCTAATTTCAGACAATGATGCTATCCCTAGAAGAGGTACAGCTGGTTTTAGTGAAACTGCCGGGAATGAGACATCTGGAACAGGTGCTGTTAAGAAAACCAAAAACGTGCCAAAGAAAAATAATAAAGATAGAGGACCTAAAAAGGAGAATTTCAATAAATCTAAATTTCAAAATCCCACTAAAAGACAAAGTGGTAGTCAAACAGTGTCCCATGTTGAGAGTATGTCCTATAATAATTATAATCCTCATAATAGAAACACATATCAAAGAAACACCTATCAAGAGTGCAGTTATGATTCATTTGATAATATGAATTCAAATAGTGCAAGGAATTCAAGGCATTTTCATGAAGAATCTTCATATGATCTTACATCTGATAGAAATGTAAATTATAAGAATAGTTCTGCTAGATATTCTAGATATGAAAATATTTCAAGGTGTAATGAAGAAAATTCAAGAGAAAATTCTCCTAAACCCAACAAAAATAGTAAATTTAGAAATGGAAATAATTCCAATTTTCAGAATTATCATGAGAATGTTCACCAAGACTATTCAGATATAAGGAAGTTTAATAGAAATGCAAGATATAAAAATGATAGGGACAGAAATTACCGATATGTCAATGAAGAGACTTCACAGGATAAGAAGATTGATGGAAGAAATGGAGAATACTTTCAAAGAAAACAAATGAATTATGGCAGAAATTATAACAATAAAAAGAAGTTCCAAAAAAAAGTCGAAATTGCATCTCAAAGGGAAAGACTTGAAGAAATGCTCAAACACAGAACATTGGAATGTTTGGTTTGTTGTGAATTATTGAAACACCACAATCAAGTATGGTCATGTAAACAATGTTATCACATTCTACATCTAAAATGTACACAGGCTTGGGCAAAATCTTCTAAACTAGAAAATGGTTGGCGTTGCCCAGCTTGCCAAAATGTTTGTAAGGAAATTCCTGCTGAATATTTGTGTTTTTGTGGCAAACAGAAACATCCCAGGAATGAACCAGGTCTAATAGCCCACAGTTGTGGAGAAATATGCTTAAGACAACGCCGCAACTGTGAGCATAATTGCTTGATCTTATGCCATCCAGGACCATGTCCGGATTGTACCATTCTTGTGGACAAATCATGTGGATGCGGGAAATCAAAACAGCAGGTAATGTGTAGCTCAGAAGTGGAAATAATATGCGACAGTCTATGTGAAAAATTTTTGGAGTGCGGTGTTCACAAGTGCTATGAAAAATGTCATATGGGAGATTGCAAACCTTGCGAAAAAATTCTACACCAAACCTGTTTTTGTGAAAAAGCCAATAGAGATGTGACTTGCTGTTTTGAATATCAAGGAAGCACATATTATTCTTGCGGAGATGTTTGTGGGAAGAAGTTGAAATGTAAAAATCACGAGTGTCAAGATATTTGCCATGGAGGTGAATGTAAGCCTTGTAAAAGGGATTGTAGTTTGATTAAAAATTGTTACTGTGGTAAGAAGCCTTTGGAAGTTCCTAGGATAAGCTGCTTGGACCCCATTCCTTCATGTGGTTTGTTGTGTCAGAAAACTTTGAAGTGTGGCCCAAATGGTAATCGTCATAAATGTGAGTCTACTTGTCATGATGGAGATTGCCCACCCTGTAATTTGTCTACAATTCTGAAATGTAGATGTGGATCCATGAACAGAGAAATTCCTTGTCAAAAATTGGTAGATGATGCAAGATGTGAGAGGAAATGCGCAAAGAAACGTTTATGTGGAAAACACAAATGTAATCAGCGTTGTTGTATCGAAATTGATCATATCTGCCCTCTTCCTTGCAATAGAACACTTTCTTGTGGCAATCATAGGTGTGAATTAACATGTCATAATGGTAGATGCAAGCCGTGTATGGAAACTAGCTTCGAAGAGCTCTATTGTGAATGTGGCTCAGAAGTTATGTATCCTCCAATACCATGTGGAACTAGGCCACCGGTCTGTGATAAACCTTGTTCAAGACCAAGAGAATGTGGTCATGAAGTTAACCATGCTTGTCATACAGGCCCTTGTCCACCTTGCACCATTTTATGCAAGAGATGGTGTTATGGTAAACATGAACTAAGAGGTGCTATACCTTGCCACCAAGAGGAATTCAGTTGTGGTTTGCCATGTGGAAAGCCTATGCCTTGTGGAAGACATAAATGCAGCAGTCCTTGTCACTCAGGTGCCTGTCCTGTGCCTTGCAAACAACCATGTATGTTTGAACGAGCAGTATGCGGGCATCCATGTAATGCTCCTTGCCATGAGCTTCCTTGCCCTCAAACCAGTTGCAAGAGTAAAGTAGCAGTTTCCTGCATTTGTGGAATTCAAAAGGGCGTTCGATCCTGCAACGATGTGACTAATGAGATGAGAAATATAGAAATGGCTCGATTGAGTGAGAAGATGATGAGTATGTCGAAAAATGAATCTGTAGACATAAGTGATATGAGCAAGCCCGAAAGGAGGCCAAGTGTTCTTAAAATCTTAGAATGTACAGAAGAATGCCGTGTTATGGAAAGGAACCGAAGATTAGCCATAGGCCTACAAATTCGTAATCCTGATATCAGCCAGAAACTCACTCCTCGTTATTCGGACTTCATGAAAAGATGGGCTACAAAAGATCCTCATTTCTGTCGAAGAATTCATGACAAGTTGACAGAACTAGTAGTGTTAGCCAAGCAAAGCCAACAGAAGTGTCGCTCACACTCTTTCGAGTCCATGAATAGAGACAAGCGTCAATTCATTCATGAATATTGCGAGCACTTTGGTTGTGAAAGTGAAGCTTATGATACTGAACCAAATAGAAATGTTGTTGCTACAGCAATCCGAGATAAATCCTGGCTGCCCAGTATGAGCCTGTTGGAGGTTATTCAGAGGGAGAATGGCCAGAGGAAAGTGCCTATGCCATCCCATTTAGAAAGGAATTTGTGTTCTAAATCGGAAAGTGTAGCTTTGAAACCTTTGGGTAGAACTGTTAGGTTAGGTGTATCGCAAACTGATACTGATAATTTGAAAAGTAGTATTTAA
- Protein Sequence
- MSLQNYQPTGYFNETANLISDNDAIPRRGTAGFSETAGNETSGTGAVKKTKNVPKKNNKDRGPKKENFNKSKFQNPTKRQSGSQTVSHVESMSYNNYNPHNRNTYQRNTYQECSYDSFDNMNSNSARNSRHFHEESSYDLTSDRNVNYKNSSARYSRYENISRCNEENSRENSPKPNKNSKFRNGNNSNFQNYHENVHQDYSDIRKFNRNARYKNDRDRNYRYVNEETSQDKKIDGRNGEYFQRKQMNYGRNYNNKKKFQKKVEIASQRERLEEMLKHRTLECLVCCELLKHHNQVWSCKQCYHILHLKCTQAWAKSSKLENGWRCPACQNVCKEIPAEYLCFCGKQKHPRNEPGLIAHSCGEICLRQRRNCEHNCLILCHPGPCPDCTILVDKSCGCGKSKQQVMCSSEVEIICDSLCEKFLECGVHKCYEKCHMGDCKPCEKILHQTCFCEKANRDVTCCFEYQGSTYYSCGDVCGKKLKCKNHECQDICHGGECKPCKRDCSLIKNCYCGKKPLEVPRISCLDPIPSCGLLCQKTLKCGPNGNRHKCESTCHDGDCPPCNLSTILKCRCGSMNREIPCQKLVDDARCERKCAKKRLCGKHKCNQRCCIEIDHICPLPCNRTLSCGNHRCELTCHNGRCKPCMETSFEELYCECGSEVMYPPIPCGTRPPVCDKPCSRPRECGHEVNHACHTGPCPPCTILCKRWCYGKHELRGAIPCHQEEFSCGLPCGKPMPCGRHKCSSPCHSGACPVPCKQPCMFERAVCGHPCNAPCHELPCPQTSCKSKVAVSCICGIQKGVRSCNDVTNEMRNIEMARLSEKMMSMSKNESVDISDMSKPERRPSVLKILECTEECRVMERNRRLAIGLQIRNPDISQKLTPRYSDFMKRWATKDPHFCRRIHDKLTELVVLAKQSQQKCRSHSFESMNRDKRQFIHEYCEHFGCESEAYDTEPNRNVVATAIRDKSWLPSMSLLEVIQRENGQRKVPMPSHLERNLCSKSESVALKPLGRTVRLGVSQTDTDNLKSSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -