Basic Information

Insect: Harmonia axyridis
Gene Symbol: -
Assembly: None
Location: chr7:20249982-20257498[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00021 0.018 15.9 1.2 1 23 132 155 132 155 0.96

2 25 1.4 1.2e+02 3.9 3.6 1 21 161 181 161 184 0.91

3 25 0.0011 0.097 13.7 2.2 2 23 197 218 197 218 0.98

4 25 0.00043 0.038 14.9 0.5 1 23 261 283 261 283 0.98

5 25 4.1 3.6e+02 2.4 1.6 1 23 289 312 289 312 0.75

6 25 0.0037 0.33 12.0 1.8 1 23 324 346 324 346 0.98

7 25 6.6 5.9e+02 1.8 0.5 1 9 352 360 352 375 0.84

8 25 0.0023 0.21 12.6 1.8 1 23 389 411 389 411 0.98

9 25 6 5.3e+02 1.9 2.6 1 23 417 440 417 440 0.80

10 25 0.0089 0.8 10.8 0.9 1 23 454 476 454 476 0.98

11 25 1.4 1.2e+02 3.9 2.2 1 23 482 504 482 504 0.96

12 25 0.0064 0.57 11.2 0.3 1 23 522 545 522 545 0.97

13 25 0.0011 0.097 13.7 2.9 1 23 551 574 551 574 0.98

14 25 0.21 19 6.5 2.1 1 23 584 607 584 607 0.94

15 25 0.42 37 5.5 2.0 1 23 624 646 624 646 0.97

16 25 0.086 7.6 7.7 2.3 2 23 653 674 652 674 0.97

17 25 0.14 13 7.0 1.5 1 23 697 720 697 720 0.95

18 25 0.0031 0.28 12.2 7.1 1 23 726 749 726 749 0.97

19 25 0.00071 0.063 14.3 1.8 1 23 760 783 760 783 0.98

20 25 0.25 23 6.2 5.1 1 23 797 819 797 819 0.98

21 25 0.02 1.8 9.7 0.7 1 23 825 847 825 847 0.98

22 25 2.7 2.4e+02 3.0 2.0 2 23 855 877 854 877 0.94

23 25 0.9 80 4.5 0.9 1 21 883 905 883 909 0.91

24 25 0.00042 0.038 15.0 0.3 1 23 936 959 936 959 0.94

25 25 0.097 8.6 7.5 1.8 2 23 965 987 964 987 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00021	0.018	15.9	1.2	1	23	132	155	132	155	0.96
2	25	1.4	1.2e+02	3.9	3.6	1	21	161	181	161	184	0.91
3	25	0.0011	0.097	13.7	2.2	2	23	197	218	197	218	0.98
4	25	0.00043	0.038	14.9	0.5	1	23	261	283	261	283	0.98
5	25	4.1	3.6e+02	2.4	1.6	1	23	289	312	289	312	0.75
6	25	0.0037	0.33	12.0	1.8	1	23	324	346	324	346	0.98
7	25	6.6	5.9e+02	1.8	0.5	1	9	352	360	352	375	0.84
8	25	0.0023	0.21	12.6	1.8	1	23	389	411	389	411	0.98
9	25	6	5.3e+02	1.9	2.6	1	23	417	440	417	440	0.80
10	25	0.0089	0.8	10.8	0.9	1	23	454	476	454	476	0.98
11	25	1.4	1.2e+02	3.9	2.2	1	23	482	504	482	504	0.96
12	25	0.0064	0.57	11.2	0.3	1	23	522	545	522	545	0.97
13	25	0.0011	0.097	13.7	2.9	1	23	551	574	551	574	0.98
14	25	0.21	19	6.5	2.1	1	23	584	607	584	607	0.94
15	25	0.42	37	5.5	2.0	1	23	624	646	624	646	0.97
16	25	0.086	7.6	7.7	2.3	2	23	653	674	652	674	0.97
17	25	0.14	13	7.0	1.5	1	23	697	720	697	720	0.95
18	25	0.0031	0.28	12.2	7.1	1	23	726	749	726	749	0.97
19	25	0.00071	0.063	14.3	1.8	1	23	760	783	760	783	0.98
20	25	0.25	23	6.2	5.1	1	23	797	819	797	819	0.98
21	25	0.02	1.8	9.7	0.7	1	23	825	847	825	847	0.98
22	25	2.7	2.4e+02	3.0	2.0	2	23	855	877	854	877	0.94
23	25	0.9	80	4.5	0.9	1	21	883	905	883	909	0.91
24	25	0.00042	0.038	15.0	0.3	1	23	936	959	936	959	0.94
25	25	0.097	8.6	7.5	1.8	2	23	965	987	964	987	0.94

Sequence Information

Coding Sequence: ATGGAAAATAAAACGGGCTGTAGCTGGGAAAATGATGATGGCACCATTTCTATTGTTAAAACAGAAATAGAAGATTACGATTCTGCTGAACATGAGAACAGAGAAAATGAAAATGAAGAAATATGTAACAATCAGTATGGAGAAGGGGGAGCTGATTTCAATGAGCAGTTTGTCACTAAACAGGAACATGTTGGTCCTGATTATGCTGATTATGGAATGGGAAATTATCAGAATGAAGATTATACCGAAGATAATTTTCAGGAAAGTGTGGGAGATGCTGGTAGCTGGCCTCTTTTGCAGGGATTCACCATGTCAGATGCGGATCAACATTTTATGAATCAGCCTGGAACATCTGACATAAACGATTTTGCAGATAAACGCGAGGCAGAGTTGTTTCCTTGTAATTATTGCGATTATGTAGGAACCCATCCAAAATTACTAACTTCACATATGAATAATCGCCATATTAAAGCTGTTGTGTATCAGTGTCCACATTGTCAATATAGTTCTACAATTCCTCGTTCGACGAAAGAACACATTCAATGTAAGCATTCTAATGAAGATGATGAAAAGTTGATAATCAAGAGGAAATGTGAATTTTGTGATTATTGTGCTACCAATGCTACAGCTTTGAAAAATCATATGAATAAGCATACAAAAGAAGTGAAACATCAATGTTCTTTTTGCGAATTCAACACTTTGTGGGAAGGATATCTAAAAATGCATATAAGAAGGAAGCATAGTGATCAATCTGCAGAAGCTGGAAATGCTACAAAAGAATATCCTTGTCAGTATTGTGATTATAAAGCAGCTACTCCTAGTACACTTAAATTGCATACAAATAAGCATACTAGGGAACAGGAGCATCAATGTCCTTATTGTCCTTATAAAACAGTATGGACAACCTACATAAAATTACACATTAAAAATAAGCATTTTAAAGATGAAAAATCTCCATCCGCTAAGGAGTATCCATGTAGTTTTTGCGATTACAAAGCTAAAAATTCCACCTTATTGAGACAACACACAAACAAGCACACTCGTGAAAAGGTACATCAGTGTCCACATTGTCCATTCAGTACACTATGGATTACTTATATGAAACTGCATATTAAACGAAAGCATAGTGAAAACAATGAAAACGATGTTGTAGAAAAAAAAGATTTTCAGTGTCAATACTGCCCTTATAAAGCTATAAGTTTGAGTCACTTGAAAATACATGAGAACAAACATACCAAGGCTATAGAATACAAATGCAATGAATGCGATTTCAAGACTACATGGTTCGGATACTTGAAATTCCATATCAAGAGAAAACACTCTGTGAAATCTGAATCTAAAGAGGAAAACAAAACAAGTTTTCCATGCAGTTTCTGTTCTTATAAAGCAATAAACTTGAGCACGCTGAAAGTTCACCAGAATAAACATACTCGAGAAAATATTTACAATTGTCCACACTGCGAATTTAAGACGACATGGAGAGCTTACATCAAAAGTCACATTCAGAAACATAACGCCGATAATTTCAAAACCAGGAAGCAAGGAGATGCGTCCATCAAGTCTTATCCTTGTCAGTATTGCAATTATGTAGCTACCCAGATGGGATCGTTGAAACTTCATGTTAATTCAAAACATACCCGAGAGAACATGCATAAGTGTCCACAATGTGACTACGAATGTGCAGTGTACGGAAACTTAAGGATGCACATCAGACGAAAACATGGTTTGAAACCTGATGATAATGGCAAATATCATTGTAAGGAATGCGATTTCTCATCAGAGAGTTCCACAGAAATCAAAACTCACCTAAGTGAAAAGCATAACATGAATGTCGAAATTGACGATCTAAAGAAAGAAGATGAGAAAACATATACTTGCCAATATTGTCCGTACACAACTCTTTATCAACAAGTTATGAAGAAACATATTAATAAGCATACAAGGCAGAATGTTATCAAATGCCCACACTGTCCTTATTCAACTGTTTGGAATCACTATATGAAAGTTCACATCAAAAGACATAATGAACCGAAAACCTCAACTGGTAGACAAAGAAGTACCAAACCTAATACTGACCAGAGCAGGCTCTTCCCTTGTCAATATTGTGACCACAGGAGCTTATCCTTTAGTAGTTTGAGAGATCACATCAATTCTGTGCACACCCGTGAAATTATCCATAAATGTCCCTATTGCGATCATAAATGTACGTTGAAAGGAAATCTCAAGGGTCACATTCGCAGAAAGCATCCTGCAGAATATATAGAACAGGAGAAAAGGTATCAATGTGACCAATGTGATTTCAAAACATCTGAAAGGAGAAATTTAAAAATTCACTTGAAAAAAGAACACAATATTGATGATGCCAAGATAAAAGCTGAAAATGGAGAATACAAGTGCCAGTTTTGCGAGTATAAGGCTAGGAGTCTTTATACTTTGAAAATTCATCGGCATAAGCATACAAAGGAAAATGCTTATCGCTGTCCCCAGTGCGAGTTTGCCACAAAGTGGCCCAATTACCTTAGAAAGCACATAAAGCAACATAGTATCGGAAAATGTCGGGTATCTTGTTTATATTGTGAGTACAAAGGTTGTTCCACATTTAGGCTGAGAAAACATATTGAAAGTCTTCATAAATCGGATGACTACTATCCTTGTCCTAAACCTAACTGTCAATTCAAAACAATTCATTATACTAGTTTGAGAATGCATTTGAAAGGCAGCATACATGCTTCAGGTGTTTCTAGATCACATGCATCTGTCACTCGCAATTTCTCATATAAGTATAAACCAAATGAAGGAAGATACTTTGCATGCGACTATTGTGACTATGCATCAAAAACTCAGGGAAATTTAGATAAACATATAGAAAATAAGCATGAAAAGAAAGCCATGAAATGTGGTTTGTGCAGCTATAGAACACCTTCCAAGAACTATTTGAATAGACACTTCAAATTGAAGCATTCATCCCCTAAGAACGAAGATCAAGAAAACGACAATTTAGAACAGGATGATATGGTGGTGGATTCTAAAGACAGTTGTGTAGATGATTATATTGATGAAGATATATCTAAAATAGATCCTTCTGACTTGAATGATAAGGATGAAAACTTAGATCTGGATGAATCTACTCTCAACATAAGTAATGAATGTGATGAGGGGACAGGTTTATTAAGTCGTTCCAAGAGGAAAAGGAGCTTCATCCCATATTATGTAGAAGAGAGCGATGAGGAGGAAAATGAACTCATTTGTGAAGATTTTCTTGAAGTAGAGTTGGGAACCAATGATAAACAAAGTGACGTTGAAATCAACAAGGACCAATCTGTCGAAAATAATCTTTCAGAAGTTCAGGTTGAAGATTCACAACCAATTGGTGATTCTAGTTCTTTAATTGATGAAAAAAGTGAAGGAAAAGGTTACATTGCTACTGATGTAAAAGTGGAGATACAAGATGATAATAATTCACATTCGCAAGATAGTTTGGAGAAAAATTGTGTTTCCAAAAATAATGTATCAAAAAGAGTTAGATTGTTGAAACGGAATACTGATCTACGTAAGAAATCTAAAAATCTCAATCAGATAAATGGACTTTCTCGAAGAAGTAAAATTTTTAATGCAACTAAGGCAAAAGAAAGAATAAATGGAAAACGGATAATATTAAAAAAAAATTTAACCAAGAAGAACAATGAAAGCAACAAAGTACTGAAACAAAATGATGACAACACTGACAATATTATCTCAAATATCAAGCAAGAATCTATTGAAGATCCCCAAATTGAAGGAGTTGTGGCAGCTGAAAATGACATTCCTCAAGATATTGTGAATAATTTGAATGGTAGTGATCATAATATAAAACAAGAACCAGAAGAGATAAACACAAATGATATGCAGAGTGATTCTAATGTTGACACTAGGTTGAATAATGAAAAATCATCTAGTAATCAACAAACAGACCAGGTATTTAATGAAAAAGTAATTGTGGAGAAAGAACTAGTTGCTGCTGAAGAAGGAAAAGGAAAAAAGGGGCATGGTGATTCTCGTGTTAAAACAAGAAAACAGGTATCGTTAAAAATTAAAAAAACATCCATTGGAAAACAAATGAATCAGTCAGTGAATGGAAAGGTTGATGTGGAAAAAGAAGTAGTTGAATCTGAAGAAGGAAAAAATAATATTGAAAAGAAATCTCAATGA
Protein Sequence: MENKTGCSWENDDGTISIVKTEIEDYDSAEHENRENENEEICNNQYGEGGADFNEQFVTKQEHVGPDYADYGMGNYQNEDYTEDNFQESVGDAGSWPLLQGFTMSDADQHFMNQPGTSDINDFADKREAELFPCNYCDYVGTHPKLLTSHMNNRHIKAVVYQCPHCQYSSTIPRSTKEHIQCKHSNEDDEKLIIKRKCEFCDYCATNATALKNHMNKHTKEVKHQCSFCEFNTLWEGYLKMHIRRKHSDQSAEAGNATKEYPCQYCDYKAATPSTLKLHTNKHTREQEHQCPYCPYKTVWTTYIKLHIKNKHFKDEKSPSAKEYPCSFCDYKAKNSTLLRQHTNKHTREKVHQCPHCPFSTLWITYMKLHIKRKHSENNENDVVEKKDFQCQYCPYKAISLSHLKIHENKHTKAIEYKCNECDFKTTWFGYLKFHIKRKHSVKSESKEENKTSFPCSFCSYKAINLSTLKVHQNKHTRENIYNCPHCEFKTTWRAYIKSHIQKHNADNFKTRKQGDASIKSYPCQYCNYVATQMGSLKLHVNSKHTRENMHKCPQCDYECAVYGNLRMHIRRKHGLKPDDNGKYHCKECDFSSESSTEIKTHLSEKHNMNVEIDDLKKEDEKTYTCQYCPYTTLYQQVMKKHINKHTRQNVIKCPHCPYSTVWNHYMKVHIKRHNEPKTSTGRQRSTKPNTDQSRLFPCQYCDHRSLSFSSLRDHINSVHTREIIHKCPYCDHKCTLKGNLKGHIRRKHPAEYIEQEKRYQCDQCDFKTSERRNLKIHLKKEHNIDDAKIKAENGEYKCQFCEYKARSLYTLKIHRHKHTKENAYRCPQCEFATKWPNYLRKHIKQHSIGKCRVSCLYCEYKGCSTFRLRKHIESLHKSDDYYPCPKPNCQFKTIHYTSLRMHLKGSIHASGVSRSHASVTRNFSYKYKPNEGRYFACDYCDYASKTQGNLDKHIENKHEKKAMKCGLCSYRTPSKNYLNRHFKLKHSSPKNEDQENDNLEQDDMVVDSKDSCVDDYIDEDISKIDPSDLNDKDENLDLDESTLNISNECDEGTGLLSRSKRKRSFIPYYVEESDEEENELICEDFLEVELGTNDKQSDVEINKDQSVENNLSEVQVEDSQPIGDSSSLIDEKSEGKGYIATDVKVEIQDDNNSHSQDSLEKNCVSKNNVSKRVRLLKRNTDLRKKSKNLNQINGLSRRSKIFNATKAKERINGKRIILKKNLTKKNNESNKVLKQNDDNTDNIISNIKQESIEDPQIEGVVAAENDIPQDIVNNLNGSDHNIKQEPEEINTNDMQSDSNVDTRLNNEKSSSNQQTDQVFNEKVIVEKELVAAEEGKGKKGHGDSRVKTRKQVSLKIKKTSIGKQMNQSVNGKVDVEKEVVESEEGKNNIEKKSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -