Haxy023818.1
Basic Information
- Insect
- Harmonia axyridis
- Gene Symbol
- ham
- Assembly
- None
- Location
- chr7:27283284-27412560[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0086 17 6.0 0.0 11 44 269 299 263 299 0.90 2 9 0.031 62 4.2 1.0 15 38 303 323 300 328 0.84 3 9 0.013 25 5.5 2.1 14 43 331 357 326 358 0.87 4 9 0.16 3.1e+02 2.0 0.2 19 38 365 381 362 386 0.87 5 9 1.5 2.9e+03 -1.1 4.0 4 38 379 409 376 414 0.78 6 9 1.9 3.7e+03 -1.5 6.2 6 38 409 438 404 440 0.73 7 9 2.2e-05 0.043 14.3 0.1 18 41 767 787 758 789 0.87 8 9 1.4e-05 0.028 14.9 2.0 17 44 794 818 788 818 0.88 9 9 0.31 6.1e+02 1.1 1.5 14 41 820 844 816 845 0.82
Sequence Information
- Coding Sequence
- ATGAGATCTAAATCGATTGCTAGAAGATTGACGTCTCAAGAAGGAAGTGAAGATGAGGTAGAAGTAACAGCCAGAATCACCCACCACGAAGATCAACCTATGGAAAAAGCCATGGTTCCTCCTCAACTGGAAGCCTCTTCCGATTTCATAAGAAGGGTGGAGTACCTCAACAACAACATCAAGAACTTCGAGGACGCTTGCGCAATAAACAATTATAGACTAGCTGCGAAAACTGTGGACAACATTAAAGATAGGACGAACAGTGTTTATAAGTACTTAAGTGAGGAGAAACCATTTGGCGAACACCCCCAAAACGGCATCAACATGGACTTGATGTATTTGAGAGCCAGGGAGGTGGTGCTTGCCAGTGGCGTGCTACCAAGCGAGCTAGAGCTGAGAGAGAAGGGAGTCTATGCCAGGGTTATCATTGGAAAAGGTACCAGGTATGGACCTTTCCAGGGAAAATGGGCTGGATGTCCCCAAGATGCTAGGTTTGCTTGGGAGGTGGTCGCTGGTTCAGGCGTAAGAGGCTGGCTGGATGGCTCCTTGGAGCATCAAAATTGGCTCAAAATGATCAGTCACTCTTCAGACAGGTCGAATTTCAACGTCAGATACTACCTTCAGAGTGGTCAGTTATGGTATGAAACATGCATGGAAATACAAACTGGTACAGAGCTGGTCCTTGGACCAAGAGAACCTCTCAACCTCCAAGACATGTTTGGAGATTCCACCTCAGCAGACGAAAAATCAGACAGGGAAACAGCTTCGCAACATAGTGGTACTGTTGATGATCGCGAAGAAGATGATGAAGATGAATCTGAAGTGAGATGCTGTGTATGTGAGCAACCTTTCACCGAAGTTGATAACTTAGACGAACATCTTGTAGTAAAACACAATTACCGAAAAAACGAATTCAAGTGTGACTACTGCCCCAAAGCTTACAGCCATAGACCATGTCTCATCAAGCATAAAGCTGTTGTACATGGTGAACATAGAAAATACCATTGTGAAAACTGCCCCAAGGTTTTTACCGATCCCAGCAATTTGCAGAGGCATATAAGGACGCATCACGTTGGCGCTCGATCTCACGCCTGTCCTGAATGCGGGAAGACATTTGCAACATCTTCTGGATTGAAGCAACATACCCACATACATTCTTCTGTGAAGCCCTTCCAGTGTGAAGTCTGCTTTAAGGCCTACACCCAATTCTCGAACCTCTGTCGACACAAACGTATGCACGCAGACTGCCGCATGCAGATAAAGTGCATCAAGTGTGGCCAATCATTCTCCACAGTAACATCCCTCTCCAAACACAAGCGATTCTGCGACTCAAGCACCCCAGCATCAACTCTTGGAGCCCCACCGCCACTCTCCTTAAACTCGATGGCAAGCAACAACCCCTTCTCCTTATACAGGCCAACCTGCCATATGCCCTTCTTTCCACCTCATTTCCCCTCCTATCACCAGATTTTCCACCCTTCCGGACCACCTTCAGGATTTATCAACCCCTTGCTCTTCAACCAATTGCCCAAATTGAGGACGGATGAGTTGCCCGAGCTGCCTTCCCCTAAAAAAATCAGATCCTTAAGCTCCGACAGGAATTCACCTTGCTCCGAAAGGATAACTCCTCCTAGAGTGCCGTCGGCCAACCTCAAAGTCAGTCCACCAACCGCTGAAGAAGCTCATTTGGCTCCATCACCTGCAAAGCCAACACCTGCACCTCAAGTGAAAACAGAAAAAGTTGAACTACGTTCCAGTACTCCAGAACAAAATAGTTATCCCACAGACCTTTCTAAGGGCTGTGAAGAACGAGGACATAAAAGATCAACACCTACTACCAGTGAAGACGGCGAACAGCCTCTGGATCTCAGTATGACATGGAAGAAGACCAAGTGTGAAGTCGAAACCAATATGTCACCTTCTCCAAGATCCGAGCGAGCTAGTGAAGTATCAACGCCACCTAAACCAGTCGAGGAGAAGATAGACGTGATAACCCTAGATGAAGAGAAAAGATCGATGGAGAAACTCCAAACCACACCCCCAATGGCTTATCCAAGACCAATTCATCCAATGCTGCTTGATATGTACAGACCTAGTTTCGCAAATTTTTCACCTTCCCCCACCAACGAAAGATTGTTGCCACCTCCATTTGGCCCCCATAGGTTTCCTTTCTTGAATAATCTTCAACCACAAAGAAACTTCGACCTACTCAGGCCTGGTTTACAGAATTTTGGTGGTGTGAAACCTTTCCATGACGTGATGCAGCAGCAGACTCAGGGCAAGATCAAAGATAGGTACGCTTGCAAGTTTTGTGGTAAGGTGTTCCCAAGATCGGCTAATCTTACCAGACATCTGAGGACACATACTGGGGAACAACCTTACAAATGTAGATACTGTGAAAGATCTTTCAGTATATCAAGCAACTTACAGAGGCATGTTAGGAATATCCACAACAAAGAAAAGCCTTTCAAATGCCCTTTATGTGAAAGGTGCTTCGGACAACAAACTAATCTGGATAGGCATTTGAAGAAACATGAGGCTGATGATGGCAGTGGAGGTGTTGTGGTTGCAGACTCACCTGGTAGCAGTAACGAAAACGAGAGAGAAGATGCTTACTTTGATGAAATTCGTAGCTTTATGGGAAAAGTCACTTATACAGGCAATGAGAGTTACAATCAAACCAGACTATTTTCTCCACCTTCTCACAACATTATTGATGTTGTTGGTAAAGATGAAGATGACTCCGAAAGTTATTCCGATGGTACTCCCCCTGAAGATTACACTGATTTAAAAACAGACGATTACGACATAAAGATGAAAACCGAAAGGGATGAAATTATAAACAACAACGAACAACCCATAGAATTAACAACATAA
- Protein Sequence
- MRSKSIARRLTSQEGSEDEVEVTARITHHEDQPMEKAMVPPQLEASSDFIRRVEYLNNNIKNFEDACAINNYRLAAKTVDNIKDRTNSVYKYLSEEKPFGEHPQNGINMDLMYLRAREVVLASGVLPSELELREKGVYARVIIGKGTRYGPFQGKWAGCPQDARFAWEVVAGSGVRGWLDGSLEHQNWLKMISHSSDRSNFNVRYYLQSGQLWYETCMEIQTGTELVLGPREPLNLQDMFGDSTSADEKSDRETASQHSGTVDDREEDDEDESEVRCCVCEQPFTEVDNLDEHLVVKHNYRKNEFKCDYCPKAYSHRPCLIKHKAVVHGEHRKYHCENCPKVFTDPSNLQRHIRTHHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCIKCGQSFSTVTSLSKHKRFCDSSTPASTLGAPPPLSLNSMASNNPFSLYRPTCHMPFFPPHFPSYHQIFHPSGPPSGFINPLLFNQLPKLRTDELPELPSPKKIRSLSSDRNSPCSERITPPRVPSANLKVSPPTAEEAHLAPSPAKPTPAPQVKTEKVELRSSTPEQNSYPTDLSKGCEERGHKRSTPTTSEDGEQPLDLSMTWKKTKCEVETNMSPSPRSERASEVSTPPKPVEEKIDVITLDEEKRSMEKLQTTPPMAYPRPIHPMLLDMYRPSFANFSPSPTNERLLPPPFGPHRFPFLNNLQPQRNFDLLRPGLQNFGGVKPFHDVMQQQTQGKIKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHEADDGSGGVVVADSPGSSNENEREDAYFDEIRSFMGKVTYTGNESYNQTRLFSPPSHNIIDVVGKDEDDSESYSDGTPPEDYTDLKTDDYDIKMKTERDEIINNNEQPIELTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00349445;
- 90% Identity
- iTF_00764936; iTF_00349445;
- 80% Identity
- iTF_00764936;