Basic Information

Gene Symbol
F54F2.9
Assembly
None
Location
chr1:58326465-58334449[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-06 0.0014 19.2 0.0 2 34 235 270 234 274 0.88
2 2 8.9e-11 1.1e-07 32.4 0.3 3 43 320 364 319 366 0.91

Sequence Information

Coding Sequence
ATGCTGGTTCTTCGGGAATACTGGTCATATCAGGATGCTTCTCATGATCAAATTAAATCAGCATTCAGAAAACTTTCATTGAAACTACACCCAGACAAAAATGTAGACAGAGACACATCAGCAGAATTTAGGAATTTAGTTAGTGTTTATGAAGTTCTCAAGACACCATCCAAGAGAAAATATTATGATGACATTCTTAAAAATGGCTTGCCAAATTGGAGAAATGCAGTATATTACTATCGATATGTTCGTAAAATGGGAATGACAGAAGTTTGTATTATTTTATTTACAATTATTACTATTGGACAATATCTGGTGAATTGGGCAGCATATTTAGAGAAAAAATATGAATTGGAGCAAACCAGGAAAAAGAAAAGGAAAGATAGGGATAAAATAGAAGAATATGTATTGGAAAAACCTTCTTTTTATGACACATTACCAATACAAATACCTCGATTGGCCTGGTTCATTATTACATCTTTACCTTATGCAATTGTTTCTATGAAGTCTATGCTCACTTACCATATTCAAGAAACAATAAAAAAGCCTCCATTGGAAGAACCTCAGGTTGAAATTCCTAAGATTAAAACTGTTCGTAAAAGAAATAAGGGATTTTTAATTCCAGAAGGTCCAAATTTTGAAACAACTTATAATCCCAAAACTTCCCAAGATTCATCCACAAATGCACCTCTTATCAGTGGTGGTCTCTGGACAGATGATGATCTGGCCGAACTTATTAAACTAATCAAGAAATATCCTGGAGGTTCAAGCAATCGCTGGGAGGTTATAGCAGATTCACTTGGCCGTTCAGTTCCCGAAGTAACATATATGGCAGCCAAAGTGAAAGAAAATGGATATCGACTACCTAATGAAGAGGAAAAAGTTTTAGAGCCTCTTGCTGCCAAAATAAAAACCAAAAAGGACGCTCTTTTACCAGAAGAAACGAAAGAAGTACACAGTTGGAATCAAGATCAACAGAAAGCATTGGAAGAAGCACTCCTTAAATTTCCAAAAGGATGTAATGATAGATGGGATAGAATAGCAGAACATGTACCAAATAAGAGTAAAGAAGAATGTATGTTAAGGTTCAGATTCTTAGCCGAAAACTTGAAAAGGCAGAAAGGAAAACAACTGGAAGAAGATTTGGAAAAAGCAAAAAATAATACAAATGAGTAA
Protein Sequence
MLVLREYWSYQDASHDQIKSAFRKLSLKLHPDKNVDRDTSAEFRNLVSVYEVLKTPSKRKYYDDILKNGLPNWRNAVYYYRYVRKMGMTEVCIILFTIITIGQYLVNWAAYLEKKYELEQTRKKKRKDRDKIEEYVLEKPSFYDTLPIQIPRLAWFIITSLPYAIVSMKSMLTYHIQETIKKPPLEEPQVEIPKIKTVRKRNKGFLIPEGPNFETTYNPKTSQDSSTNAPLISGGLWTDDDLAELIKLIKKYPGGSSNRWEVIADSLGRSVPEVTYMAAKVKENGYRLPNEEEKVLEPLAAKIKTKKDALLPEETKEVHSWNQDQQKALEEALLKFPKGCNDRWDRIAEHVPNKSKEECMLRFRFLAENLKRQKGKQLEEDLEKAKNNTNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00348800;
90% Identity
-
80% Identity
-