Basic Information

Gene Symbol
-
Assembly
None
Location
chr2:53955407-53962860[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.1 1.4e+03 0.0 0.0 3 17 193 207 191 209 0.90
2 6 0.16 2e+02 2.7 0.1 22 45 273 298 266 299 0.78
3 6 7.5e-09 9.2e-06 26.2 0.1 1 45 305 351 305 352 0.92
4 6 4.8e-10 5.9e-07 30.0 0.1 1 44 358 405 358 407 0.93
5 6 7e-06 0.0086 16.7 0.0 3 46 416 459 414 459 0.96
6 6 0.00043 0.53 10.9 0.0 1 45 465 508 465 509 0.84

Sequence Information

Coding Sequence
ATGGATTCTGAGAATGAAGAGAACGAAATAGATAAATCTTTTGCCACCTTGACCAACTGCAAACATGAATTCCAGGATAATTCTGATTTTCAATTTGAGACGTTCCTCATAGATGAAGACACTGATTGCGACGAAGACTTTGAAGACAATTTGGTATATTCTAATAATTCAAAAGAGGGAGAAATAGAAATATCCAATTTTGAAGATGTCTTGAGTATTCAATCAGATATATCTCAAAACTGTTCATCAACATCTGAAGATTGGAAAGCTTTAATTAATTCCCAAAATTTTGAATTACAAAATGTAATGACAAAAAATCGTGAAGAAAGAGTAATGTTGCTGAAAATGTTCCATAGAATAAAGGAAAATCTTAATGATATTCAAAGTAAAATAAAACCTTTACGAGAATTATGTGGAAAAATTGAACCAAAAAAAACTTATAACATGTACTTAGGAGAAATTGGAGCCCCCTATTTCAAAACTAAAAAGGACCATTTTTGTAATAATCCCAATCTAGACACATTGAATCGTAAAAAAGAGGGCGTCTTCTCAATTTATCAAACGATATTATCCCCAAAGTGGTCTAAAAATGAATGTGATAATCTAATAAGGGGTGTAAAATTAACATATAATCTCAATAAACAAAAAGCTCTACTAAAAGAAAAAGCTACCATAAAACGAATGTTGAATAATGACTCAAATTCAGAAATGATATCTCAAAACATTGATAGACTTGAACAATTGGATGAGGACATTAGGAATCTAGAAGCAATTGGAATAAATGATTTACCTCCTTTATTGGGTAATGAATATATAGATTGGTATCATATATCTACAGAATATTTAAAAGATAAACACACTGCCCAGGAATGTTCCTCTTTTTGGCACATTTATTTACATCCTAACATAAGTAAGTCTAACTGGTCAAGTGAAGAAAATGAAAGTATAAAAAATTTGGCAGTAAAATATAAGAATCAAAATTGGGATCTGATAGCAGAGGAACTTGGTACACATCGCAGTGGATTTTCTGTTTTTCTTCACTACTCCAGTGTTTTATGTAATCAAAAACTAAGAGTTCGATTCACAGAAGAAGAGGACAAAAATCTCTTACAACATGTGGAAAGTAGAAGAAAGGGATGTTATGTTCCTTGGAATACAATTGCTGGATTATTTCCAAATCGAACCAAAACGCAATTACACCATAGATATAAATATTTCTTGTCAAATTCTAATCATCGTACTTCAGATTTCTCGGAAGCTGAGGACATCCTAATAATGCTTTTAGTTGAACGTTTTGGTCGAAAATATACCACGTTCACAAGTTACCTGCCGTCCAAATCATACATGCAAATAAAATCGAGATATGATAATCATTTGAGACTAAAAAGAATAAGAGGTGCTTTTACTTTAGAAGAGGATGAACAAATATTGAGGCATTTTAATAAAATGAGTGGTGAAATAACACCCCTTATGATGCAAATGAATAGAAATAGACTGCAACTAAGACAAAGATATAAGACATTAAAAGAATATTTCAACAAAAACCCAGGTAAATCTTTAGAAGACATTCCACGAAGAAAAGCTAGAACAGATGAAACTTCCCGAAAGTTAGAATTCTTACAACATATGGTGGATCGATTAAAAGATGAAAATGAAATTCCTACTATTGGTGAGATTGAATTAAAACTAGGACAGACAAAAACAAAACAATCAAATAATGATCATGATTTAGATGCATTGCTTACAAATTTTTTCAATACTTCACATACAATCGAACAGAAATCCCTAGAAATATCCTCTATTCAAATCCAAAATGCTGCAGATACAATGTATAGTATACTTCAACATTGGGGAGTCAATCTTCAAATTCCTTCAGAATTAAAAAAAAATATAACATTGGATATAATTGATATTGAAATTTTAAATTTGTTGAGAGATAAATATCGTTCAGATATTCCACGATCTTCAAATACCATAAATAATATACTTCCTCCCAATACCAATTCTCTCATTGGTTTAAGAGGTTTACTGTTAGAAGATCAATCATTCAAAAAAGCTAAGATCAATCTAACCCTGAAAGATAAACTTTCTGCTAGAAGTGATACAACACATAATGAAAAATGCCTTTTTTTGAATAGATTTATTTCTACATTCATGTGGTCAGGATTACTTTCAATTGAATCTCCAAATATTCATCTATCAGAAACAAAATCAGAAATGAATAATTCAGGAAAACGTAAAGAAAATAGAGGAGATAAAAGCAAAAATAAAGGAATAAAAAGAAAGTTAAAGGATACTCACAATAATTCGACCACAAATAAAATACAGAAAAAGGAATATAACCAACACACAGAACAACAAAGATTTAGCTCACGACTGAGAAATAAGAAACAAATATCAGAGACAAATGAAGAAATATTAAAAAAAAAATGTCAAGCATCAGGAGCACCTCTTAATGACAATGTAAGCCACCAATCCAGTTTAGAACATATGAACTGTATTACAAAAATTCAAACAATGGAAAAGTTAACAAATAGGGAAACTTTGAAGAATTCAAAAATTAACTTGAATCAAAGTAGCTCACAAATTATTCCATCAAATCTTACGAAAATTGATAAAAGTGAAATAGTTAAATTACTACAGGGTAAAAAACCAGTGAAAATATTCAAAATTCAAAGTATCAAGAATCAAGATGGTAGTATATCTACTATAACTAAACCTTCGAATATAAAAATCAATGAAAAAAAGCAAAACATTGAAGAATTAAAAAAACTAGGAGTTTCGGATTTAATTGCTCTAGCTGATAATATAAAGAACAACACTGAAGCAAACCGGAATAATTGTAGTCAGAATACAAATACACAGAATAATGTGCTTATGGACTTGAATGATATGAAAATGACGCTCAAGAATTCTATCAGGAACAATAGTGGAAGTAAACTTTGCTCTGATAAAAAAGATTTGGGTTGA
Protein Sequence
MDSENEENEIDKSFATLTNCKHEFQDNSDFQFETFLIDEDTDCDEDFEDNLVYSNNSKEGEIEISNFEDVLSIQSDISQNCSSTSEDWKALINSQNFELQNVMTKNREERVMLLKMFHRIKENLNDIQSKIKPLRELCGKIEPKKTYNMYLGEIGAPYFKTKKDHFCNNPNLDTLNRKKEGVFSIYQTILSPKWSKNECDNLIRGVKLTYNLNKQKALLKEKATIKRMLNNDSNSEMISQNIDRLEQLDEDIRNLEAIGINDLPPLLGNEYIDWYHISTEYLKDKHTAQECSSFWHIYLHPNISKSNWSSEENESIKNLAVKYKNQNWDLIAEELGTHRSGFSVFLHYSSVLCNQKLRVRFTEEEDKNLLQHVESRRKGCYVPWNTIAGLFPNRTKTQLHHRYKYFLSNSNHRTSDFSEAEDILIMLLVERFGRKYTTFTSYLPSKSYMQIKSRYDNHLRLKRIRGAFTLEEDEQILRHFNKMSGEITPLMMQMNRNRLQLRQRYKTLKEYFNKNPGKSLEDIPRRKARTDETSRKLEFLQHMVDRLKDENEIPTIGEIELKLGQTKTKQSNNDHDLDALLTNFFNTSHTIEQKSLEISSIQIQNAADTMYSILQHWGVNLQIPSELKKNITLDIIDIEILNLLRDKYRSDIPRSSNTINNILPPNTNSLIGLRGLLLEDQSFKKAKINLTLKDKLSARSDTTHNEKCLFLNRFISTFMWSGLLSIESPNIHLSETKSEMNNSGKRKENRGDKSKNKGIKRKLKDTHNNSTTNKIQKKEYNQHTEQQRFSSRLRNKKQISETNEEILKKKCQASGAPLNDNVSHQSSLEHMNCITKIQTMEKLTNRETLKNSKINLNQSSSQIIPSNLTKIDKSEIVKLLQGKKPVKIFKIQSIKNQDGSISTITKPSNIKINEKKQNIEELKKLGVSDLIALADNIKNNTEANRNNCSQNTNTQNNVLMDLNDMKMTLKNSIRNNSGSKLCSDKKDLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-