Haxy010095.1
Basic Information
- Insect
- Harmonia axyridis
- Gene Symbol
- clz9
- Assembly
- None
- Location
- chr1:11534328-11539790[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-07 0.00031 20.9 0.0 2 39 17 54 16 58 0.81 2 2 8.2 2.9e+03 -1.4 0.0 27 37 145 155 145 159 0.87
Sequence Information
- Coding Sequence
- ATGGGAAAATATCAGCGCCTTGTCGCTTCAAATTACAGGCGCTATTCAGAGGAGAGCCTTCAAAGCGCCGTGCGAGATAGAAAGGCAGGCATGTCACTACGAGCAGTGGCGAAAAAATATGGAATCCCAAAGGATACGATTGACAGAAGAGTTAAAAATCTCCATACATTAAAACCGGGTGGACAAACTATACTCACCTCTAATGAGGAGCAGAGAATCGTCAATAATCTCCACCTGGCATCGCAATGGGGATTTCCTTTCACATCACTTGATGTGCGATATATTATTAAGGCCTACCTGGACAGCAGTGGACGGGTTATTCAAAAATTCAAGAACAATTTGCCAGGAAGGGAGTTCATGAGGAATTTCCTACAAAGACATCGCCAAATTCTCACCCAGCGCTGGTGTGAGAATATTAAAAGGGTGAGAGCTGGCGTAAATCGCTCAACAATCAATAAGTATTTCGACGAATTAGAGAAGAGTTTGGAAGGAATTCAGCCTGATGCAATAATCAATTACGACGAAACAAATATGACAGACGATCCAGGCAAACAGAAAGTAATTGTTAGAAGAGGATGCAAGCACGCTCATCGAGTTCTGGATAGCTCTAAGACCAGCCAGTCACTTATGTTTGCCGGTACTGCTTCTGGATTGTTGTTGCCCCCGTATATACTATATAAAGCCGAACATTTATACACGACATGGACTGAAAATGGACCTGCAGGTGCTAGATACAACAGGTCAAAGACTTCTTGGTTTAATGAAGCCATTTTCGAGGGCTGGTTTAATACTGTTGTGCTGCGATATTTTGCGAAATTCGATAAGAATGAGCCAAAAGCATTGATTGGTGACAATCTGGCTAGTCATGTCTCCCAAACAGTGATAGAGTTGTGCAAGGATAATAACATAAGGTTCATTCTGTTACCACCCAATAGCACTCATTTGTGTCAACCATTATATGTGGCATATTTTCGCCCTCTAAAGCGCGCATGGAGAGAGGTTCTCCTCGAATGGAAATTGAAAAATCGAGGTGTAGTTCCTAAAGACATTTTTCCTAGACTTTTAAAGAAGTGTTTGGATGGAATGAACGTAAATGACAGAACGTCGAAGAATTTGATAGCTGGTTTTTCTGCAACAGGTATATATCCCATCGACCGGACCAAAATACTGAACAAGTTCCCAAACGAACCTGAGGAGCCTCAAGACAATGATTTTATTATTATCGACAACGCCTTTGAAATTTTCTTGAGAAATCTTCATACCAAAGAGAGCACAACGACTTCAAATAGGCGGAAAAGACTTCAAGTGGAACCTGGTAGAAGCATAGAACAAGCGGAAATACCTTCCACCACCACACAGCCAGATGGAGAACCTGTAAATGACTCCAGCTTACTTCAATCTGAAGATGAAGAACTCCCCAATTTATCCGCCATTCTGAAAAAAAATAAGATCGTTCCAGCAGAGAAGGCCTCAAGTGATTCTGAGGGATCCTTTTCCTGTCAAGACTCTTCAGACACTCCAGAAAATTTTGACGAAGATGTAGACTTCGTCAATCCATCCAATATTCTAGTAGATGACTTTGTTCTAGCCGAATTTGATTACAACGCACCTCATCAAAAATCCAAGTCAAAGAGATTCATTGGGAAAATCAAAGAAATTGATAACAATTTTAGAACTTTCCAATGTACCTTTTTAAGGAAAGCAACGACGGGAAAAAACGTTTACGTTTTTCCTAACGTAGAAGATCTGAAATTACTGCGGAGCAGATTATTTCTAAAGTTTTTCCCATTAGTAGCCGCAGGGGAAGGGGTAATTGGCTGCATAGATGGTAGTCATATTGGAATTTTACCACCAAGAGAACACCCAAATTCATATGTCAACAGAAAAGGTTTTCACTCTGTTTTGTTGCAAGGTGTATGGGACAATAGAAAACTATTTACACATGTTTATGTTGGAGAACCTGGATCAATACATGATAGCCGATTGTTTGAAAAGTCAGATCTCTTTGAGAGCATAGAAAGTGGAGAATATGAATTTCCTAACAATGCCCATATACTAGGGGATTCAGCATATAAATTATCAGACTATATGATGGTTGGTTTTAAAAATAATAATAATTTAACTAACAGACAAAAAAACTTCAATGCAAAGTTATCACAAGTCAGAGTATGTATAGAGAATACTTTTGGACTTCTAAATGGCCGTTTTCGAAGGATTAAGTTTCTAGAAACAGTAAGGATGGACTTAATTTGTTTGCTTGTTTTTTCTGCCTGTCTTTTGCACAATATTTGTGTACTCAATGGGGATGGAATTGATGATTTAATAGACGTCAATCAGGAAGTGGAAGAGGAGAGAGATCAAAATGAAGAAAATGAATTCATCTTTGTCAACACAAGGCAAAATCAGCCAGCTATTGCCAAAAGATTGTGA
- Protein Sequence
- MGKYQRLVASNYRRYSEESLQSAVRDRKAGMSLRAVAKKYGIPKDTIDRRVKNLHTLKPGGQTILTSNEEQRIVNNLHLASQWGFPFTSLDVRYIIKAYLDSSGRVIQKFKNNLPGREFMRNFLQRHRQILTQRWCENIKRVRAGVNRSTINKYFDELEKSLEGIQPDAIINYDETNMTDDPGKQKVIVRRGCKHAHRVLDSSKTSQSLMFAGTASGLLLPPYILYKAEHLYTTWTENGPAGARYNRSKTSWFNEAIFEGWFNTVVLRYFAKFDKNEPKALIGDNLASHVSQTVIELCKDNNIRFILLPPNSTHLCQPLYVAYFRPLKRAWREVLLEWKLKNRGVVPKDIFPRLLKKCLDGMNVNDRTSKNLIAGFSATGIYPIDRTKILNKFPNEPEEPQDNDFIIIDNAFEIFLRNLHTKESTTTSNRRKRLQVEPGRSIEQAEIPSTTTQPDGEPVNDSSLLQSEDEELPNLSAILKKNKIVPAEKASSDSEGSFSCQDSSDTPENFDEDVDFVNPSNILVDDFVLAEFDYNAPHQKSKSKRFIGKIKEIDNNFRTFQCTFLRKATTGKNVYVFPNVEDLKLLRSRLFLKFFPLVAAGEGVIGCIDGSHIGILPPREHPNSYVNRKGFHSVLLQGVWDNRKLFTHVYVGEPGSIHDSRLFEKSDLFESIESGEYEFPNNAHILGDSAYKLSDYMMVGFKNNNNLTNRQKNFNAKLSQVRVCIENTFGLLNGRFRRIKFLETVRMDLICLLVFSACLLHNICVLNGDGIDDLIDVNQEVEEERDQNEENEFIFVNTRQNQPAIAKRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -