Haxy013300.1
Basic Information
- Insect
- Harmonia axyridis
- Gene Symbol
- -
- Assembly
- None
- Location
- chr6:19899169-19908875[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-06 0.00086 19.5 0.0 2 38 418 455 417 460 0.89 2 2 0.067 23 5.3 0.1 4 29 470 495 469 497 0.86
Sequence Information
- Coding Sequence
- ATGGCACAAGAATCTGAGTTCACTGAAGTGAAAAGAAGAAAACGACCTGAGGGAAGTCATGGTGGATCAGCTTTATATTTTCACAAAAACATCAAAGGAAAAACAAGAAAACAACTGCAAAAATTTTCCAAGTGTGGAGAGTTTGAATGTGCAGCTGGAGAGTGGACCACAAAAAAGAGACAATTCATAGTTCTGTCAATATATAGACCTCCAAATGGTAGTATAAAAACTTTCCTGTCCGCAATGGAAAAAGTTTTGGAGAAAATTCATCAAGAAAATAAGGAGATAATAGTAGCAGGTGATTTCAATATTGAACTATTAAGACCAAATAAAGATGCATCTGAATTACTTAATCTGATGGAATCTTTCAATCTCAATCCAGTCATTAACCAGGATACAAGAGTTACTGATAGATCAAGTTCATCCATTGACAATATTTTCACAAATATCTCTGATTGGGAAAGTTCTGTGTTCAACATTCATGTATCAGATCATAAAGCACAAAAGCTCAGTTTCTTAATAGAAATAGAGAAAAATAATAATCTTAGGTTCTGTCGATTTTATGGTCTGCAAGAAAAAAAGACATTCCTGGAGGAATTATTTAGTCAGAGCTGGGAGCTTGTAAGAGAAGTAGACACACAAAATGTTGATGAGCAATGGAATATTTTTATGTCGGACTTTACGAATATATTCAATAAAAACTTCCCAAAAAAACTGTCAATGAACAAAAAGCATTTGAGCAAGTATAGATCACCTGAAATTGAAGAAATAAAAAAGAGACTAGATATTCTTTTGATTATGAGTAACGCTAGTAAACAACATATGGATCTGTACAGAAATACAAAGAAAGAATATGACCATGCACTGAAAAAACAGAGAACAAAATCTTATGAGGAACGGGTGATTAGATCTGACAATAAAAGCAAGACTATGTGGCAAATCTGCAAGGAAATATCAGGTACAATAAAAAATCAAGAAAATTATCAGCTAGAAGGAACCCCAGAAGAAATTGCAGAAAATTTAAATATACACTTCAACAATACACACATGAAAGAGGAAGTGTTAGATGACGCACCGTCGCCTCATTCTGACCAACAGTCCACCAATGGAGAAGACGTCAAGCCCAACATATCCGTATCATCCCCTGTTTCAGGCAAAGCAAACTATAGGCCGCTCAAAAGCCAGAATGGAAGGAATACAAGCACGAGAATCTCATCTTCGCCATACAAGCAGTACTCAGTACAAACATGTCGCGAGGATCTCAACTTCGCCATCCAAGAGGTAGCCAATGGAAACATGTTGGCCCTACAAGCTGCCAAGAAATACAACGTGCCTTATTGGGCCATCTACTATAATATTAAAAAGTTAGGCATTGTAACCACCATGTCTTGCAGATATTTCAGCAAGGATCTTAACTCCGCCATCAAAGAAGTAGCTAATGGAAAAATGTTGGCTCTACAATCTGCCAAGAAATACAAAGTGTCATCTAGATTCTACAACCCTCTCCGATAA
- Protein Sequence
- MAQESEFTEVKRRKRPEGSHGGSALYFHKNIKGKTRKQLQKFSKCGEFECAAGEWTTKKRQFIVLSIYRPPNGSIKTFLSAMEKVLEKIHQENKEIIVAGDFNIELLRPNKDASELLNLMESFNLNPVINQDTRVTDRSSSSIDNIFTNISDWESSVFNIHVSDHKAQKLSFLIEIEKNNNLRFCRFYGLQEKKTFLEELFSQSWELVREVDTQNVDEQWNIFMSDFTNIFNKNFPKKLSMNKKHLSKYRSPEIEEIKKRLDILLIMSNASKQHMDLYRNTKKEYDHALKKQRTKSYEERVIRSDNKSKTMWQICKEISGTIKNQENYQLEGTPEEIAENLNIHFNNTHMKEEVLDDAPSPHSDQQSTNGEDVKPNISVSSPVSGKANYRPLKSQNGRNTSTRISSSPYKQYSVQTCREDLNFAIQEVANGNMLALQAAKKYNVPYWAIYYNIKKLGIVTTMSCRYFSKDLNSAIKEVANGKMLALQSAKKYKVSSRFYNPLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -