Haxy013836.1
Basic Information
- Insect
- Harmonia axyridis
- Gene Symbol
- ttk
- Assembly
- None
- Location
- chr6:19920596-19922794[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-08 5.8e-06 26.4 0.0 2 40 335 373 334 376 0.93
Sequence Information
- Coding Sequence
- ATGGAACAGGTGATGCAAAAGTACTGCCTACGATGGAACAACTACCAGACGAACTTGGTCAGAGTTTTCGACGAGATGCTCAAGAACGAGAACTTTACCGACGTCACCATAGTCTGCAATGACGGCATTCGCTTCAGGTGCCACAGGATGCTCTTGGCGGCATGCTCAAAATTCTTCCAGGACCTCTTCATCAGCGTACCCGGCGATCAACATCTCGTCATGCTCCTTAAGGACGTCAAACACACGGACATGAAACACATCTTGGAGTACATGTACACCGGAGAGGTTAACGTAGCCCAAGAAGAGATATCTTCTATCATCAGAACAGCGGAAGAGTTGAAGATCAAGGGTTTGATTGGTGAAGATAAGGTTACGAAGAAGGAAGAAGAACCTGTTGAAGAAGCTCCTCCCAGCAGACCTACTTCAGGTCACATGCACAGTAACAGCAATATGCACTCACCACCTCATTCCAACAATGCCATGTACAAGAATCCTTATTCTAATATGTACTCCAAAATGCACACTACCGAGAGGAACAGCATGCCCATGTGGCACGTCCCTGGCTTGCCTCTGCCTCCAGTAGCTGAAAATCCTTCCTCCAATCACTTTTCCGTACCATCACCGCCTAATGTTATGCCAACCTACGAACAACACAACCAAGAAGTCTACCATCACAGGAGGAAGAAATTCTCCAGCGTGATGATGCCTAAAGACACACCTATCTTGAGGACAGTCTTGGGACAAGGGCAAACTGATTCTTCTCAGCCTGTCAGTTTGGTGATGAGCCACGCAGAAACTAAGGACGAGAACCAGGAACAAGAACCATTGAGAAAGCACTTCAAGGAAGAACCACAGGAAGACAACGACTACCATAACGAAGTAGACGTCAAACCTAGAATAATCACGCCGTCTTCTTCACCTGTAACTTACCCTACTGCAGGAATAACGACATACGCTCAGGCACAGAAACCGGAAACCAATAAGAGATATAAACAGTATTCGAACAACGATCTAAACCAAGCCTTGGATGACGTGAGATCTGGCATGTCCGCTTTGTTGGCATCTAAAAGGCACAATGTGCCATCCAGGACTTTGTACGATAAGGTCAAGAAGTTGGGGATAATAAAAACCCAGAGTCCACCCAGAGTCAAACTAGGCAAGCGAAGTGCTAATGGCAATCCGGTCGAGTACAATTCCGACGATAGATCAGTGTCTCCACGTGTAAAATCTGAAAATGAGGATTATCCGATCAACAATAACTCCTCGGTCACCAAAGCATTTCTACAACACGCTGGAGAAGACGCCTTGAAGGCAATGGCATATGCTGCTTCTGTAGCGCAAGTATTGCAAATCCCCAACAATGCTTTTGGCGGTACACGAGCGGCAGCATTAAGATATCTACCGTACAACCGGCTTTCTCCAGCTAACAGTGACAATCGTAGTGGCACTCCTGATAAAGAAGAAGACTACGACGAAGACCATGTTGAGGATTTATCGATTAACAAAAGACAAGAAGGTGTGATCATGCCTCCTATGAATCAAGTATCGTCAATAGTAAACGAAGAAAATCAACGAAGTAGGAAGGAGGACCCGAGAAGAAACGTTGAAGATACAACGTAA
- Protein Sequence
- MEQVMQKYCLRWNNYQTNLVRVFDEMLKNENFTDVTIVCNDGIRFRCHRMLLAACSKFFQDLFISVPGDQHLVMLLKDVKHTDMKHILEYMYTGEVNVAQEEISSIIRTAEELKIKGLIGEDKVTKKEEEPVEEAPPSRPTSGHMHSNSNMHSPPHSNNAMYKNPYSNMYSKMHTTERNSMPMWHVPGLPLPPVAENPSSNHFSVPSPPNVMPTYEQHNQEVYHHRRKKFSSVMMPKDTPILRTVLGQGQTDSSQPVSLVMSHAETKDENQEQEPLRKHFKEEPQEDNDYHNEVDVKPRIITPSSSPVTYPTAGITTYAQAQKPETNKRYKQYSNNDLNQALDDVRSGMSALLASKRHNVPSRTLYDKVKKLGIIKTQSPPRVKLGKRSANGNPVEYNSDDRSVSPRVKSENEDYPINNNSSVTKAFLQHAGEDALKAMAYAASVAQVLQIPNNAFGGTRAAALRYLPYNRLSPANSDNRSGTPDKEEDYDEDHVEDLSINKRQEGVIMPPMNQVSSIVNEENQRSRKEDPRRNVEDTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00764873;
- 90% Identity
- iTF_00764873;
- 80% Identity
- iTF_00764873;