Haxy007209.1
Basic Information
- Insect
- Harmonia axyridis
- Gene Symbol
- -
- Assembly
- None
- Location
- chr1:55618190-55625501[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-09 6.3e-07 29.5 0.0 1 38 131 168 131 173 0.94
Sequence Information
- Coding Sequence
- ATGGGTCATTCGTCCTATTTCCCATCAGGAAAAGTTTGCGATATATGTCTCAAGGGAAAACAAACAAGAAAACCATTCAAAAGTTTACCCGATGAACGGAAGGCGAAGAACATACTCGATTGCATCTCCAGTGATGTTTGTGGACCCCCGAATCCTGTCAGCCACAATGACTATGCAAATGATTTGAACGATAGGAAAAGTATTTCAGGCTTCGGAATAAAAATTTATGACAACTTTGTTTTCTGGAAATCAAAGAAGCAAGCAATTGTTTCTCTTAATACCTCAGAAGCTGAATACATTGCTTTATCGGAATGTGGACAAAATGTATTTTTGTCGATGCCTAGACAAAGCGTATTATCTCCATCTTCGAAGAAGAAACAAAAGACGTGGGACCCTGAACAAATGAAAAAAGCAATCGATGCAGTGAGGCACAAGGTCATGGGATATAAAAAAGCTGAAAAATTGTTTTCGGTGCCTAGATCTACACTGAAACGGTTAGTGAAGGATCCACAAAAGTCTTTAGATTTACTTGTACATAAACCTCTTGGTCGAAAACCTATACTACCACTTAGCTTGGAAGAAAAGTTAGTGGATTATATTTTGTTTATGGAGGCTAGGTACTATGGACTCACTAGGATGGATGTTAGAAAAATGGCTTATCAGCTGGCGGTGAAAAATAATATTCAGAATACATTCAAGAATGATGTAGCAGGGCGAGCTTGGTTGGATCACTTTTTAAGGCGACACAAAGATAAATTATCGTTGCGCAGATCAATGGGGACATCATATGCTCGTGCTAATGGCTTTAACCGTGAAGCAGTCAAGGAGTTTTTCAATATTTTGGAAGCCGAAATGAGTAAAACGAATTATCCTCCCGACAGAATTTTCAATGTCGATGAAACTGGGTTGACTATCGTGCAATCAAAAGTACCACAAGTGTTAGGGAAAAAGGGGAAAAGGCAGATAGGAGCCTTAACTGCTGCTGAACGAGGTTCTTTGTGTACTATTGTCTGCTGCATGAGTGCATCAGGTATGTTTGTGCCCCCTATGATGATTTTTCCAAGGAAAAACTTCACGGATATCTTGATGAAAGGTGCACCTCCTGGAGCGATTGGCAAAGTTCATCCATCTGGTTGGATTCAGTCCAATTTGTTCACTGAATGGTTCAGACACTTCATTGATAAAACTAACCCTAGTGCCGAGTCTCCCATATTACTTATATTTGACGGCCATTACAGTCACACGCGCAACATTGAAATAATAGAGCTTGCTCGTGTAAACCATGTTACGATCATCAGTCTTCCACCTCACACAACTCATAAGCTCCAACCTTTGGACAAGACTTTCATGGGCGCCTTGAAGAGTCACTACAGTGAGGAGATTCGCAAGTTTCTTTTGCACTCTGAAAGAATGCTAAAACCTTACGACATTGCTGAACTTTTTGGACGATCATATCTCAAGAGCACGACAGGAGAAATTGCAGTAAATGGTTTCCGTGCAACAGGCATTTATCCATTTAATCCGGAAGTTTTCAGTGAGGTCGATTTTTTAACGGAAGAATCTCATAGTTCTCTTACTCCTGATAACCAAGAAACAGGCCTTGTTGATGTAGTATCCCAGAGTACTCCAGGAGTGAGCTCTGAAGTACAAGAGCTGCAAAGTAGTTTGATTCTCCCAGAAGACATTCAACCAATCCCTAAGGCAAAGACTCGCACTTCTAATCGTGGAAGAAAGACTACTCGAGCGAACGTTATCACTTCATCGCCATATAAAAACCAATTAACCGAATCATTACAAGTAGCAGAGACTCGTGTAAAAGGGCGCGGACGAGGACGTGGTCGCGGACGTGGACAAGGTGTCAGGCATAATTATGACGGAGCAAGCACAAGTGGAGTTAGTGTACGGCGCAAGAGAGATGTGACACCCAGCAGTAGTTCCGACAGTGACGAAACAAACGTCAATTTTGATGACATAAATCTGAATAGGGTTCCTGACAACGAAAATGTACCCTGTATTTTTTGCGAAACCATTTATACCAATGACAGACCTGGAGAGAAATGGATACAGTGTCAGAGTTGCCAATTATGGGCTCATATTGCCTGTGCAGGTTCAGAAGGGGACTATTATATTTGTGACTTCTGTCGTTAG
- Protein Sequence
- MGHSSYFPSGKVCDICLKGKQTRKPFKSLPDERKAKNILDCISSDVCGPPNPVSHNDYANDLNDRKSISGFGIKIYDNFVFWKSKKQAIVSLNTSEAEYIALSECGQNVFLSMPRQSVLSPSSKKKQKTWDPEQMKKAIDAVRHKVMGYKKAEKLFSVPRSTLKRLVKDPQKSLDLLVHKPLGRKPILPLSLEEKLVDYILFMEARYYGLTRMDVRKMAYQLAVKNNIQNTFKNDVAGRAWLDHFLRRHKDKLSLRRSMGTSYARANGFNREAVKEFFNILEAEMSKTNYPPDRIFNVDETGLTIVQSKVPQVLGKKGKRQIGALTAAERGSLCTIVCCMSASGMFVPPMMIFPRKNFTDILMKGAPPGAIGKVHPSGWIQSNLFTEWFRHFIDKTNPSAESPILLIFDGHYSHTRNIEIIELARVNHVTIISLPPHTTHKLQPLDKTFMGALKSHYSEEIRKFLLHSERMLKPYDIAELFGRSYLKSTTGEIAVNGFRATGIYPFNPEVFSEVDFLTEESHSSLTPDNQETGLVDVVSQSTPGVSSEVQELQSSLILPEDIQPIPKAKTRTSNRGRKTTRANVITSSPYKNQLTESLQVAETRVKGRGRGRGRGRGQGVRHNYDGASTSGVSVRRKRDVTPSSSSDSDETNVNFDDINLNRVPDNENVPCIFCETIYTNDRPGEKWIQCQSCQLWAHIACAGSEGDYYICDFCR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00787564;
- 90% Identity
- iTF_00764625;
- 80% Identity
- -