Haxy012047.1
Basic Information
- Insect
- Harmonia axyridis
- Gene Symbol
- bab1
- Assembly
- None
- Location
- chr2:16622014-16989716[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-16 3.6e-14 52.7 0.0 1 43 315 358 315 360 0.95 2 2 5.2 1.8e+03 -0.8 0.5 6 15 458 467 453 472 0.80
Sequence Information
- Coding Sequence
- ATGCAGCACACTTCGGGATCGCCGCAGCAGTTCTGCTTGAGATGGAACAATTACCAGTCGAATCTGACGAACGTGTTCGATCAGCTTCTGCAGAGTGAGTCTTTCGTCGATGTCACCTTGGCTTGCGATGGACACTCGATGAAATGCCACAAGATGGTCTTGTCCGCTTGTAGCCCTTACTTCCAGTCGTTGTTTTTCGAGAATCCCTGCCAGCATCCGATCGTGATTATGAGGGATATCAAGTGGCCCGAGCTCAAGGCGGCCGTCGAGTTTATGTACAAGGGCGAGATCAACGTTTCGCAGGAACAGATCGGACCTTTGCTCCGGGTTGCGGAGTCCCTCAAAATCAGAGGATTGGCCGATGTGAACGGCGAGCAGGATACGGTGACGACGGCCGCTGGCGAGATAACCACGAAGCCGTCGCCGATAAAGCAGCTGTCGACGACGTCCATCCCGATGACGCCTAATTCGAACAGCGGGATGGACTGGGATGCTGCCGGGAACAGTCATCCAGCGAAGAAGCGTCGCCGATCTGGCGAAAGGAGCAGCATCAGCAGTCCTGGCGAGAGCGCGGCTAGCACCACGGCGGAGATACCTGATCCTCCGCTGTCGGTGGAGATGTCGCCCGCGCCTTCGGCCACCCCCTTGCCTCCCTCGAGCTCCGCGGAGCCTCTCTCGTTGAATTTACCCTTGCCGTCGCACGTGCCGCACATGCCTTCGACTGACGATATGGAGATCAAACCTGGTATTGCAGAGATGATACGCGAGGAAGAACGGGCTAAGCTTTTGGAATCTTCTCATGCTTGGCTCGGAGCTTCCACTTCTTCGATAGCCGATAGCTATCAGTACCAACTGCAATCCATGTGGCAGAAATGCTGGAACACAAACCAGAGCCTTGTTCATCACTTGCGCTTCAGAGAAAGAGGACCGCTGAAATCTTGGAGACCGGAGACTATGGCTGAAGCAATATTCTCGGTATTGAAGGAAGGTTTATCGCTTTCTCAAGCCGCAAGAAAATATGACATTCCTTATCCAACCTTTGTCCTCTACGCTAACCGAGTTCACAATATGTTAGGACCCTCTGCAGATGGTGGATCAGATCTCAGACCTAAAGGTCGAGGACGACCACAGCGTATCCTCTTAGGAATATGGCCGGATGAACACATAAGGGGTGTTATAAGGGCAGTTGTTTTCAGAGACTCTCATCATATCAAGGAGGAACAACAAATTCATTACCCCAGAATTCATGATTCCGTCAGTAATGTTAATACATCTAGCGTGAATACCGCTGGAGCAACAGCTAATATCCAAAACTTCTCCAATTCATCCTGTAACGATGGTTCGGATCCTAACGTATCTCCAGCCGCTGCAGCTGCTGCTGTAGCAGCAGTAGCCCAAGGTCTACGACAGCAAATGTGCAGCATGGTAGCAGCAGCTAACCATAGTTCTGCCCACGAAACCAATCCCGTGGCGAGTTTGGTGAACTCGCTTGCTTTCGGTAACGCCTGTAACAATATGCAGAACAACGGTTCACTTCCAATGGGCATGATGCCCTCAATGAGCCACATAACTTCTTTGCGGAGTATAAGTAGTCCTGCAGGATGCATACAGGACCTCAGGATAAGTCCTTCAGAATCCGCTCTTGAAAGTCCAATATCTTCCCCACTAGGCCTATCAGTTCCCAGTTCTATGGAACAGACCATGAACCTATCCCTGTCCCACAACATGAACACTACTAGTGCTGCGGGTGTGACGGGTATGACGTATAAATCATCTAGGCCGTACTCGTCTCCGAGACCTGAAAACCTCTTCCAAGAAGATATAAATGATCTGGTAAAACCAATCAATTCTTCCACCCCTAACTCGAGAGAGTCCATGCCTATCAAACTGGAACCAATGACAGAATGTCGAGGCGAATGA
- Protein Sequence
- MQHTSGSPQQFCLRWNNYQSNLTNVFDQLLQSESFVDVTLACDGHSMKCHKMVLSACSPYFQSLFFENPCQHPIVIMRDIKWPELKAAVEFMYKGEINVSQEQIGPLLRVAESLKIRGLADVNGEQDTVTTAAGEITTKPSPIKQLSTTSIPMTPNSNSGMDWDAAGNSHPAKKRRRSGERSSISSPGESAASTTAEIPDPPLSVEMSPAPSATPLPPSSSAEPLSLNLPLPSHVPHMPSTDDMEIKPGIAEMIREEERAKLLESSHAWLGASTSSIADSYQYQLQSMWQKCWNTNQSLVHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGIWPDEHIRGVIRAVVFRDSHHIKEEQQIHYPRIHDSVSNVNTSSVNTAGATANIQNFSNSSCNDGSDPNVSPAAAAAAVAAVAQGLRQQMCSMVAAANHSSAHETNPVASLVNSLAFGNACNNMQNNGSLPMGMMPSMSHITSLRSISSPAGCIQDLRISPSESALESPISSPLGLSVPSSMEQTMNLSLSHNMNTTSAAGVTGMTYKSSRPYSSPRPENLFQEDINDLVKPINSSTPNSRESMPIKLEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00349367;
- 90% Identity
- iTF_00349367;
- 80% Identity
- iTF_00764872;