Basic Information

Insect: Halyomorpha halys
Gene Symbol: -
Assembly: GCA_000696795.2
Location: NW:5101-18708[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.007 0.28 11.2 0.9 2 23 69 91 68 91 0.97

2 14 0.085 3.4 7.8 9.5 1 23 97 119 97 120 0.96

3 14 3.5e-05 0.0014 18.5 4.7 1 23 126 148 126 149 0.96

4 14 0.00047 0.019 14.9 3.1 1 23 155 178 155 178 0.97

5 14 0.0015 0.062 13.3 3.7 1 23 184 207 184 207 0.98

6 14 0.0014 0.055 13.5 0.8 1 23 213 236 213 236 0.97

7 14 0.00013 0.005 16.7 0.2 1 23 242 265 242 265 0.98

8 14 0.00056 0.022 14.7 1.9 1 23 271 294 271 294 0.97

9 14 0.0013 0.052 13.5 1.3 1 23 300 323 300 323 0.95

10 14 0.00016 0.0066 16.4 1.1 1 23 329 351 329 352 0.95

11 14 0.018 0.72 9.9 0.2 1 23 358 381 358 381 0.94

12 14 0.0003 0.012 15.5 0.6 1 23 387 410 387 410 0.94

13 14 0.0004 0.016 15.2 2.5 1 23 416 438 416 439 0.95

14 14 1.1e-05 0.00045 20.0 1.5 1 23 445 468 445 468 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.007	0.28	11.2	0.9	2	23	69	91	68	91	0.97
2	14	0.085	3.4	7.8	9.5	1	23	97	119	97	120	0.96
3	14	3.5e-05	0.0014	18.5	4.7	1	23	126	148	126	149	0.96
4	14	0.00047	0.019	14.9	3.1	1	23	155	178	155	178	0.97
5	14	0.0015	0.062	13.3	3.7	1	23	184	207	184	207	0.98
6	14	0.0014	0.055	13.5	0.8	1	23	213	236	213	236	0.97
7	14	0.00013	0.005	16.7	0.2	1	23	242	265	242	265	0.98
8	14	0.00056	0.022	14.7	1.9	1	23	271	294	271	294	0.97
9	14	0.0013	0.052	13.5	1.3	1	23	300	323	300	323	0.95
10	14	0.00016	0.0066	16.4	1.1	1	23	329	351	329	352	0.95
11	14	0.018	0.72	9.9	0.2	1	23	358	381	358	381	0.94
12	14	0.0003	0.012	15.5	0.6	1	23	387	410	387	410	0.94
13	14	0.0004	0.016	15.2	2.5	1	23	416	438	416	439	0.95
14	14	1.1e-05	0.00045	20.0	1.5	1	23	445	468	445	468	0.98

Sequence Information

Coding Sequence: atGGATCCTTCATGTACAAGTTTgccacttcaaatttttattaaagaagaaagaGTAGAAGAGGATTCTGACTCCTCTCAAATTGGTGTCAAGGCAGAGCAAAATGAAGATCGTAGTTTTAATTACgATGAAGGTGGATCTAGAAATATCCGGCAAACTCATGCTAGTAAcgggaaaacaaaaaataaacaagtgttATATAAACAGTGTACACTGTGTGAATACAGATCAGTATTAGCTAAGGCTCTGAGAAAACACATGAAGTCACAGCATCCGGAAGTAAAACCATATCAGTGCCATCATTGTAGTTTTCAAACTGCAATCCACAGGAATTTAAAAAGGCATATTATGTCCCACCACACTGGAGAGAAGCCTCATAAATGTACACATTGTGATTATAAGTCAGTACAAGCAGGTAATTTAAAGGCTCATATTATGACACATCATACAAATGAGAAGCCACATCAGTGTGCTTTTTGTGAATATTCTACGGTACACAGTGGTAATTTAAGGAGGCATGTAATGACCAACCACACTGGAGAAAAACCACATAAGTGCCCTCATTGTGATTACAAAGCAGTGCAATCCAGTAAAATAAAGCAACATATAATGACCAAGCATACTGGAGAGAAACCCCATCAGTGCTTGCAGTGTGAATATAGATCTGTTACTGCTGTTGGCTTAAGGAGGCATATAATGACCAATCATTCTGAAGAGGTGCCTTTTCAATGTTCTCAATGTGATTACAGGTCTATTACAGTTGCTGCTTTGAATAGGCACATAATGACTATCCACACTGGTGAGAGGCCTTTTCATTGCCCTCTTTGTAATTATAAAGCGGTTCAGTCGAGTTATTTAAAAGAACATATTAAGTCGCGCCATACAGATAAGAAAGCTCATCAGTGTCCTTATTGTGATTATTCCAATTCAAGCCTTAAGAGTTTAAAGTCCCATATAATGGCTAATCATACCGGAGAGAAACCTCATCAGTGTCCATATTGTGATTATAAAGCAGTACAAGCAGGAACTTTAAAGACTCATATTATGGCACATCATACTAATGAGAAGCCTTTTCAGTGTCCTTACTGTGACTTTAAAACAGTATTAGGTAGCAGATTAAAGATACACATAATGGGCAACCATACTGgagagaagcctcatcaatgttcTGACTGTGATTATAGATCTGTTACTGCGAATGCTTTGAAAAGGCATGTTATGGCAAATCACACTGGGGAAAAGCCGCATGAGTGTTCATATTGCAACTACAAAGCTGTTCGATCTAGTTCTTTGAAGGAACATATTATGGCCCATCATACAAATGAGAAACCATATCAGTGTCCTCATTGTAGCTATGGAACAGTTAGAAGCAGCTCTTTAAGAACACACATAATGTCAAACCATCCTTGA
Protein Sequence: MDPSCTSLPLQIFIKEERVEEDSDSSQIGVKAEQNEDRSFNYDEGGSRNIRQTHASNGKTKNKQVLYKQCTLCEYRSVLAKALRKHMKSQHPEVKPYQCHHCSFQTAIHRNLKRHIMSHHTGEKPHKCTHCDYKSVQAGNLKAHIMTHHTNEKPHQCAFCEYSTVHSGNLRRHVMTNHTGEKPHKCPHCDYKAVQSSKIKQHIMTKHTGEKPHQCLQCEYRSVTAVGLRRHIMTNHSEEVPFQCSQCDYRSITVAALNRHIMTIHTGERPFHCPLCNYKAVQSSYLKEHIKSRHTDKKAHQCPYCDYSNSSLKSLKSHIMANHTGEKPHQCPYCDYKAVQAGTLKTHIMAHHTNEKPFQCPYCDFKTVLGSRLKIHIMGNHTGEKPHQCSDCDYRSVTANALKRHVMANHTGEKPHECSYCNYKAVRSSSLKEHIMAHHTNEKPYQCPHCSYGTVRSSSLRTHIMSNHP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00165401;
90% Identity: -
80% Identity: -