Basic Information

Insect: Halyomorpha halys
Gene Symbol: -
Assembly: GCA_000696795.2
Location: NW:9241-22871[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 9.3e-05 0.0037 17.1 0.3 2 23 83 105 82 105 0.95

2 16 0.11 4.4 7.4 0.3 1 23 110 133 110 133 0.94

3 16 2.4e-05 0.00095 19.0 1.3 1 23 139 162 139 162 0.97

4 16 9.5e-05 0.0038 17.1 4.3 1 23 168 190 168 191 0.96

5 16 0.00029 0.011 15.6 5.6 1 23 196 219 196 219 0.98

6 16 0.0009 0.036 14.0 0.6 2 23 244 266 243 266 0.92

7 16 0.00012 0.0047 16.8 0.6 1 23 271 294 271 294 0.96

8 16 0.00029 0.012 15.6 0.9 1 23 300 323 300 323 0.94

9 16 0.00011 0.0045 16.9 4.6 1 23 328 351 328 351 0.97

10 16 0.12 5 7.3 5.2 1 23 357 379 357 379 0.94

11 16 0.069 2.8 8.1 3.8 2 23 390 411 390 412 0.95

12 16 0.0047 0.19 11.8 8.5 1 23 418 441 418 441 0.96

13 16 3e-05 0.0012 18.7 2.8 1 23 447 469 447 469 0.99

14 16 0.035 1.4 9.0 6.5 1 23 476 499 476 499 0.98

15 16 0.00073 0.029 14.3 6.9 1 23 505 527 505 527 0.98

16 16 3.1e-05 0.0012 18.7 5.2 1 23 534 557 534 557 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	9.3e-05	0.0037	17.1	0.3	2	23	83	105	82	105	0.95
2	16	0.11	4.4	7.4	0.3	1	23	110	133	110	133	0.94
3	16	2.4e-05	0.00095	19.0	1.3	1	23	139	162	139	162	0.97
4	16	9.5e-05	0.0038	17.1	4.3	1	23	168	190	168	191	0.96
5	16	0.00029	0.011	15.6	5.6	1	23	196	219	196	219	0.98
6	16	0.0009	0.036	14.0	0.6	2	23	244	266	243	266	0.92
7	16	0.00012	0.0047	16.8	0.6	1	23	271	294	271	294	0.96
8	16	0.00029	0.012	15.6	0.9	1	23	300	323	300	323	0.94
9	16	0.00011	0.0045	16.9	4.6	1	23	328	351	328	351	0.97
10	16	0.12	5	7.3	5.2	1	23	357	379	357	379	0.94
11	16	0.069	2.8	8.1	3.8	2	23	390	411	390	412	0.95
12	16	0.0047	0.19	11.8	8.5	1	23	418	441	418	441	0.96
13	16	3e-05	0.0012	18.7	2.8	1	23	447	469	447	469	0.99
14	16	0.035	1.4	9.0	6.5	1	23	476	499	476	499	0.98
15	16	0.00073	0.029	14.3	6.9	1	23	505	527	505	527	0.98
16	16	3.1e-05	0.0012	18.7	5.2	1	23	534	557	534	557	0.98

Sequence Information

Coding Sequence: atgaagaCTCTAAACGACTGTGGTgtttatataaaagaagaagagaatgaagaaaCTGAGTCTTCTCATGGGCTCATTCAtgtgaaagaagaagaagagatgCTTGTTCAAGATGAAGttATGAGCAGTtgtgatatttctataaaagagGAAACGGAAGAAGAGACTAATAGTACTCgtgcCAAGAATACAATGGAACCTAAAGAGCAGATCAAAGTATCtgaagaaaaaagtaagaagTCTCTACAATGTCCTCAGTGTGATTATAAAACAGTAGTAGCACGTAATCTAAAAAGGCATATGGCATCCCGTCATGCTGATAAGAAGCATCAGTGTACTGATTGCGACTATAAAGCTGCATTACCAGATATCCTTAGAAGACATGTAATGATCCGCCATTTAGGTAAAAAGCCTTATCAATGTCCCCATTGTGACTATAAAACAGCTTACTCACGTTACTTAAAAAACCATATAATGATACCCCATGAAGATAAGAAACTCCATCAATGTCCTGATTGTGATTGTAAACTAGCTAATGAAACTAGCTTAAAAAGGCATATGATGGTCCATCATACAGAGAAGCCTTATAAATGCcttcattgtgattataaaacaGGAAATCAACGTCACTTAAAAAGGCATATAAAGGTCCAACATCCAGgtgcCAAGAATACGTTGAAACCTAAAGAGCAGATCAAAGTATctgaagaaaaaagtaaaaagtctCTACAATGTCCTCAGTGTGATTATAAAACAGTAGTAGCACGTAATCTAAAAAAGCATATAGCAGCCTGCCATGGTGAGAAGAAGCATCAGTGTACTGATTGCGACTATAAAACTGCATTACCAAAAAACCTTAGAAGACATGTAATGATACCCCATGTAGATAATAACCTCCATCAATGTCCTGATTGTGGTTGTAAACTAGCTAATGCAACTAGCTTAACATCGCATATATTGGCCTATCACACAGAGAAGCCTCATAAATGCCCTAATTGTGATTATAAAACAGGAAATCAACGTCACTTAAAAAGGCATATAAAGGTCCAACATCCAGGTGAGATGCTTCATCAATGTCCTCAATGTGACCACAAAGCAGTTAGTGAACATTGCCTAAAAAAGCACATTGTGGCTCATACTGAGGAGATGCCTCATCATACTGTGGAGAAATGctctcattgtgattataaaacaGCATATgcaagcattttaaaaaaacatataatgttcCACCATACAGATGAAAGACCTCATCAATGtaatcattgtaaatataaaacagttcaAGCAGGACATTTAAAAAGACATATTGTAACTTGTCATACTAATGAGAATACTTTTAAATGCCCTCATTGTGATTTTCAAACAGCATATGAaagtaattttagaaaacatatgATGGTCCACAATAcagataaaaaagtttatgaatgttatcattgtaaatttaaatcagTTAAACCAGGAcatttaaaaacacatattatAACTTGTCATACAAATGAGGAGCCTCATAAATGCCCTCATTGCCATTATAAGACAGTATATGAAagtaattatagaaaacatATGATAGTCCAccaaacagataaaaaattttaccaatgtaatcattgtaaatataaaacagttcaACCAGGACTTTTAAAAAGACATATTAGAACTTGTCATACAAATTAG
Protein Sequence: MKTLNDCGVYIKEEENEETESSHGLIHVKEEEEMLVQDEVMSSCDISIKEETEEETNSTRAKNTMEPKEQIKVSEEKSKKSLQCPQCDYKTVVARNLKRHMASRHADKKHQCTDCDYKAALPDILRRHVMIRHLGKKPYQCPHCDYKTAYSRYLKNHIMIPHEDKKLHQCPDCDCKLANETSLKRHMMVHHTEKPYKCLHCDYKTGNQRHLKRHIKVQHPGAKNTLKPKEQIKVSEEKSKKSLQCPQCDYKTVVARNLKKHIAACHGEKKHQCTDCDYKTALPKNLRRHVMIPHVDNNLHQCPDCGCKLANATSLTSHILAYHTEKPHKCPNCDYKTGNQRHLKRHIKVQHPGEMLHQCPQCDHKAVSEHCLKKHIVAHTEEMPHHTVEKCSHCDYKTAYASILKKHIMFHHTDERPHQCNHCKYKTVQAGHLKRHIVTCHTNENTFKCPHCDFQTAYESNFRKHMMVHNTDKKVYECYHCKFKSVKPGHLKTHIITCHTNEEPHKCPHCHYKTVYESNYRKHMIVHQTDKKFYQCNHCKYKTVQPGLLKRHIRTCHTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -