Basic Information

Insect: Halyomorpha halys
Gene Symbol: -
Assembly: GCA_000696795.2
Location: NW:420878-454617[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.3 1.3e+02 2.8 0.1 1 23 508 530 508 530 0.94

2 18 0.0014 0.056 13.4 2.5 1 23 536 558 536 558 0.98

3 18 0.35 14 5.9 0.3 2 21 566 585 565 586 0.91

4 18 0.0032 0.13 12.3 1.9 2 23 594 615 593 615 0.97

5 18 0.0015 0.06 13.3 0.6 2 23 622 644 621 644 0.91

6 18 9.8e-05 0.0039 17.1 3.3 1 23 650 672 650 672 0.96

7 18 1.2e-06 4.9e-05 23.1 1.3 1 23 681 704 681 704 0.97

8 18 0.015 0.62 10.1 0.2 1 23 714 736 714 737 0.94

9 18 0.087 3.5 7.8 0.8 1 23 758 780 758 780 0.97

10 18 0.033 1.3 9.1 0.0 1 21 786 806 786 807 0.94

11 18 6.4 2.6e+02 1.9 0.9 1 23 827 849 827 849 0.93

12 18 0.058 2.3 8.3 0.2 1 23 855 877 855 877 0.97

13 18 3.2e-06 0.00013 21.7 0.8 1 23 893 915 893 915 0.99

14 18 1.7e-06 6.9e-05 22.6 0.5 1 23 921 943 921 943 0.98

15 18 0.0071 0.28 11.2 0.6 1 23 949 971 949 971 0.98

16 18 0.001 0.04 13.9 3.4 1 23 977 999 977 999 0.98

17 18 1e-05 0.00042 20.1 0.9 1 23 1005 1027 1005 1027 0.99

18 18 2.5e-05 0.001 18.9 0.6 3 23 1035 1056 1034 1056 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.3	1.3e+02	2.8	0.1	1	23	508	530	508	530	0.94
2	18	0.0014	0.056	13.4	2.5	1	23	536	558	536	558	0.98
3	18	0.35	14	5.9	0.3	2	21	566	585	565	586	0.91
4	18	0.0032	0.13	12.3	1.9	2	23	594	615	593	615	0.97
5	18	0.0015	0.06	13.3	0.6	2	23	622	644	621	644	0.91
6	18	9.8e-05	0.0039	17.1	3.3	1	23	650	672	650	672	0.96
7	18	1.2e-06	4.9e-05	23.1	1.3	1	23	681	704	681	704	0.97
8	18	0.015	0.62	10.1	0.2	1	23	714	736	714	737	0.94
9	18	0.087	3.5	7.8	0.8	1	23	758	780	758	780	0.97
10	18	0.033	1.3	9.1	0.0	1	21	786	806	786	807	0.94
11	18	6.4	2.6e+02	1.9	0.9	1	23	827	849	827	849	0.93
12	18	0.058	2.3	8.3	0.2	1	23	855	877	855	877	0.97
13	18	3.2e-06	0.00013	21.7	0.8	1	23	893	915	893	915	0.99
14	18	1.7e-06	6.9e-05	22.6	0.5	1	23	921	943	921	943	0.98
15	18	0.0071	0.28	11.2	0.6	1	23	949	971	949	971	0.98
16	18	0.001	0.04	13.9	3.4	1	23	977	999	977	999	0.98
17	18	1e-05	0.00042	20.1	0.9	1	23	1005	1027	1005	1027	0.99
18	18	2.5e-05	0.001	18.9	0.6	3	23	1035	1056	1034	1056	0.97

Sequence Information

Coding Sequence: atgaagttaattgttaaaaataatgctGGAGAAACTGTCtctattcaaattaaatctaatgaGACATTCTTGGATCTCAAAGAAAGAGTAGAAGAAGAAGCTGGAATAAGTTTAGATTTGAAAGACATTgctttaaagggaaaaaaaatcacagagTCACAGCGagtaatggaatattttttatcctatggtGAATCTGAAGATGAACCTCCAACAAACGTGTATTGTGCTGTACCAGGATGTAAAAATACTAAGGCTACTAATCCTGACAAAGTGTTTTTTGAATTCCCTTCAGAAGAAATAAGgTGTCATCAGTGGGTGTTGTATTGCCAACGTCTTAATATAGGGCCTGGTAAAAAGCGCCTTAGTTTAACATCAGAGTCAACTATCTGTAGTGACCATTTTAGACCTGATCAGTTTGTAAAAAATACCAATACTTTATTGAAACGAACTGCAGTACCTTGTGTTAAAGTTGGTTCTGGAGATCAATTGTCAAAGTTAGATATTCAATTCAAAGAGTTTGAAGGTCATGAGTCACCACAGAGCTTTGATAATGAAGATAATAAGCAGTTTTTTTATGAAGACACTGAAGACACAAAAAAAGGAATAAATCTTCGTCTATGTCGCTTGTGTGCAACATCCAGTGACgagttcttttttatatttgatgaaatCGGAAGGGAACTGAAAATCgctgaaaaaataaacctatgCTTGCCTATTGAAgtaCAGATGACAGATGCTTTTCCTAAGCAGATATGCAAACCGTGTTTTAATCAGTTAAATGACATTTTTGAAATGGCTGATATGTGTAGTATCTCACAGCAGAAAATGATAGCCCTTAccgataatgaaatatttaaTGATGAAGAATTAATGACTGTTGTGGATGAAAATGGTGAAGAAGTTGTTTTAGGATCTTCGGCTAAGAATATTTTGAAGGGGTGTTGTCCCTTATGTAATGAAGGAAATTTGAAAAGTGGAGAACATATTGCTGAAGATAGGGATTTACTACCTATGCAAGGAATAGATTCAATAATACTAGATGgtcaaattaatagaaataattccaTTGATAAAGTAAGTGATGTCTTTTCAGAAAGTGAATTTACTTCAGAAAATGATACCGTTAAAAGAATGATTGGAATtaggaatgataaaaaaatgagtgATATTGCTTTTCCAAAAGTTAATTGTGATACTTCAGATTTAGATTCATTAGCTGAATCCTCACCATCTCaggtttttaataaagaagtagaTCCTCTTAAAATTGATGATAATTCGTCTAAAAGTGAAAGTGATCAGATTATTGAATGTTATTCATCATTATCTTCTCCTTTAAATATATTGAGTACTGATGATTCTAATAGCAAGAACATAAATGAAGACCCCTTGTCAGTATGTAATGAAGAATTGCAGATTGAACCAGACCTTTACTATATGGACACTGAGTCTGAATCTGCAAATATTACTAATCAAGAgagtagtgaaaaaataaattgtagctCCAAGCATTCTTTTGTTTGTCGTCTCTGTGCCTCTgagtttgaagaaaatattgatcTCTTGCGACATGCTTTTGTTCATTCTTGTCATGGTTTTTATCAGTGCTCTAGTTGTGTTACATTCTTTACTACGAAAGATGAATtggaaaatcattttaaatatcatgaatcAAAAGATAATACCATTTATTGTGATGTTTGTAATTTAGGTTTTAAATCAGCTTTAGACTTAGGGACGCATACCTGCAAACAAGACAGTTTCCCTCCTAATAAATGTCCTgtgtgttataaatattttcgatCTGTATTAAAACTCAAACAACATATGAAATTTCATGAAGCAGCTCGACCttcttattgtaatatttgtgataaatttttttctgatgataTCAAACTTCAAAAACATTCCCTTTATGTTCATAGTTCTAGAAAAGCTCACTGTTGTGAAGAATGTGGTAAAGTTTTCAAATCTGAAGCTTCCATGAAATATCACCAAAGAGCTCATCAAACTGAAGAAAGGATTAAACCTTATACTTGTGAACGTTGTGGTAAATCATTTATGAGGAAAAGTATGTTAATCAATCATATGACTTCTTCACATAATCACACAAACTTTGAAACACCTTGCTTTACTTGTAAACTTTGCAATGAAGCATTCCCAAGCACAGTAGCTGCTGTTGCCCATATGGATAATCATCATAAATTAGAATGCATGGACGAAGCTACATATAGCTTTGAAATGCATACTATTAACCGTTTATTTGTTTGTGAGTTTTGTGAGCGTTGTTATGCTGAAGGGTCTGTTTTAAACTCACATCGTGAAATGCATCCATCTGATTCACCTTATGAATGTAAGCTTTGCGATGCAGTTTTTCCCTCTATTGAGGaagtaaaaattcatagaaaaaattatgcaaatgaAAAAATTCCTGCTGAATATATTGCTGATTTTACTATACCTAAAACGTATCTGTGTGAATTTTGTGAaagatatttcttaaattatgtcAAATATACTGAACATTTAACTGTTCACTATGGCCCAGAACCTTATCAGTGCCGTTCATGTCCTTTGAAATTTAGCACTTTGGTTGATGCTATGGAGCATAGATCAATACATGGTGAATCACAGTTACAGGTAGATGAGTACAATTTTTATCGCCCATATGAATGCCACTATTGTAGCAAAACATTTGCTATTGAAGatgcattaataaaacatattagaaTGCACACAGGTGAAAAACCCTTCATTTGTGATCAGTGTGGTAAAGGATTTTCACAAAGTTCTGGTCTTTATACTCACCAAAAGGTACATTCTTCTGAACGACCTTATTCTTGTACAGTTTGtcctagaaaatttaagattaaaggTGACCGTGATGTTCATGTTAGGAAACATTCTGGAGATCGTCCTTATAAATGTGAATTTTGTGGTAAAGCTTTTATGACCCAACATGTTTACAGTCAACACAGAAAAATTCACACTGGAGAAAGACCATATAAGTGTGATGTTTGTGGAATAGCATTTCGAAGGTCTCATGTGCTTACAGTTCACAAAAGAATTCATACTGGTGAAAAACCTAATATTTGTGACATTTGTGGAAAAAGGTACCGTCAGAAAGGTGATATGTTAAAGCATCGAAGAGTTCAACATGGTATATTGAGCaccaaacaaaatattaattcaattgtcGACAGTTGA
Protein Sequence: MKLIVKNNAGETVSIQIKSNETFLDLKERVEEEAGISLDLKDIALKGKKITESQRVMEYFLSYGESEDEPPTNVYCAVPGCKNTKATNPDKVFFEFPSEEIRCHQWVLYCQRLNIGPGKKRLSLTSESTICSDHFRPDQFVKNTNTLLKRTAVPCVKVGSGDQLSKLDIQFKEFEGHESPQSFDNEDNKQFFYEDTEDTKKGINLRLCRLCATSSDEFFFIFDEIGRELKIAEKINLCLPIEVQMTDAFPKQICKPCFNQLNDIFEMADMCSISQQKMIALTDNEIFNDEELMTVVDENGEEVVLGSSAKNILKGCCPLCNEGNLKSGEHIAEDRDLLPMQGIDSIILDGQINRNNSIDKVSDVFSESEFTSENDTVKRMIGIRNDKKMSDIAFPKVNCDTSDLDSLAESSPSQVFNKEVDPLKIDDNSSKSESDQIIECYSSLSSPLNILSTDDSNSKNINEDPLSVCNEELQIEPDLYYMDTESESANITNQESSEKINCSSKHSFVCRLCASEFEENIDLLRHAFVHSCHGFYQCSSCVTFFTTKDELENHFKYHESKDNTIYCDVCNLGFKSALDLGTHTCKQDSFPPNKCPVCYKYFRSVLKLKQHMKFHEAARPSYCNICDKFFSDDIKLQKHSLYVHSSRKAHCCEECGKVFKSEASMKYHQRAHQTEERIKPYTCERCGKSFMRKSMLINHMTSSHNHTNFETPCFTCKLCNEAFPSTVAAVAHMDNHHKLECMDEATYSFEMHTINRLFVCEFCERCYAEGSVLNSHREMHPSDSPYECKLCDAVFPSIEEVKIHRKNYANEKIPAEYIADFTIPKTYLCEFCERYFLNYVKYTEHLTVHYGPEPYQCRSCPLKFSTLVDAMEHRSIHGESQLQVDEYNFYRPYECHYCSKTFAIEDALIKHIRMHTGEKPFICDQCGKGFSQSSGLYTHQKVHSSERPYSCTVCPRKFKIKGDRDVHVRKHSGDRPYKCEFCGKAFMTQHVYSQHRKIHTGERPYKCDVCGIAFRRSHVLTVHKRIHTGEKPNICDICGKRYRQKGDMLKHRRVQHGILSTKQNINSIVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00763904;
90% Identity: iTF_00763904;
80% Identity: iTF_00763904;