Hhal004872.1
Basic Information
- Insect
- Halyomorpha halys
- Gene Symbol
- ham
- Assembly
- GCA_000696795.2
- Location
- NW:85524-168996[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.17 1.9e+02 1.7 0.3 18 29 180 191 176 202 0.78 2 7 0.00086 0.97 9.0 0.1 19 43 210 231 204 232 0.89 3 7 0.031 35 4.0 0.3 19 38 239 255 236 260 0.89 4 7 0.77 8.7e+02 -0.4 3.6 4 38 253 283 250 288 0.78 5 7 0.21 2.4e+02 1.3 6.3 6 31 283 308 278 314 0.73 6 7 2e-05 0.023 14.2 0.1 18 41 647 667 643 669 0.89 7 7 0.0017 2 8.0 8.3 17 44 674 698 668 725 0.94
Sequence Information
- Coding Sequence
- ATGAGAGGCAGTAGCGAAGATGACCGCTCTAGACCGCCGGCAGAGGTGGAGCTCCGTGGCTCTGCAGGAATCTACGCACGTGAGCTAATACCACAAGGGGTCAGATATGGCCCCTTCATGGGAAAGTGGGTACCTAAGCCTTTGGACCCAAGCTTCGCGTGGGAGGTTCGAGTGGGAGGCAACAGAGGTTTTCTGGATGGAACATTGGAATTTGGAAACTGGTTGAAATACATTAGGAGCACCGATAACCCTGATGAAATTACAGTGAGACCTGTATTGTCAGCGGGGCaggTCTTCTACGAAACGGTTACAGATGTCCAGCCGGGAAGAGAACTTATGCTTCCACCTAAGGAACCACTTAGGCCAGAGCAGGAAGAATCCCACTCAGCTTCCCAACAATCCAGTACCGGCGAGGAAGACAGGGAAGAGGAAGAGGAAGATTCAGCTCGTTGCCCTGTTTGCGATTTGTCATTTCCTGACGTAGACCTGTTGGACGACCATCTTGTCAGTGGTCACAGGTACGTCGGTGGACAGTTCAGGTGCAACAAGTGCGCCAAAGGCTACAGTTGGCGACCGTGTCTAGTACAACACCAAGCTCTACAGCACGGTGAAGTCAAAAGATATCCTTGTGAAAACTGCAACCGGGTTTTCACCGACGCTAGCAACCTCCAAAGACATATAagAAGAGACCACGTTGGAGCTAGATCACACGCTTGCGAGCAGTGTGGTAAGACTTTTGCGACGTCCTCAGGCCTCAAGCAGCACACACACATTCACTCCAGTGTCAAGCCATTCCAGTGCGAAGTTTGTTTCAAGGCATATACGCAGTTCAGCAATTTATGTCGACATAAGAGAATGCATGCAGATTGCAGAATGCAGATCAAATGTGGAAAATGTGGCCAGACCTTCTCGACGGGAACTTCGCTCTCAAAACACAAGAGGTTTTGTGACTCAACCTCGCCGGTAACATCTCCTGGAGGCATGAATCTACCGCAGCCTGGTGGCAACCCTTTTCTTATGTACCCCAGGCCACCTAGCGGCCTTCCCTTTTACCCCCCTATGATCCATCCCTACCCAACGCTGTTTCACAACTCTTCTCCAGGGTTCCTTCCAAATCCTCTGTTATTTAAGAACCCAGAAGAAGAGATGCATATCAGCACACAATTGACCCTGGAGGCATATCAGAAATTTAGTCGGCAGAGGACTGGTTCTTCTCAGGACGGGTCGCCCTCTCCTACTAGAACCTCTTCTCCCATCGACGCTGGAACACCATCGATTAATTCCATATTGAGCCTCAATAAGGTGTCACCACCTACTGCGGAAGAAGCAGCCTCCAGTGAAAGACCGTCACCAGCACGCCCACCGATGTCGGCGAACTTGCCAAAGCTTGAAGAACCTCTTCAAAATCACATTCTCAGCGACCAGGCGCAGTCCCCTGTGTCGTCTAAAGCTGGTGAAACAAACGACCAGCCGCTAGATCTCAGCGTTGGCAGAAAAAGAAGTCGTGAGGGATCGCCAATAACAATGCGAAGGACACCTTCACCACTAGTAAACAAAATAGAAGAGACCCCTAAAAGAAGTAAAGAGCTtataataaaacacataaaagaTCTTGCACCATCACCACCTGAAGACTCTTCTTCGTCTCCTGACACTAACGAAAAGATGCCGCAGATGGCCTACCCTAGACCAATCCATCCAATGTTCTTAGAGGCTATATATAGGCCACAATTTCCAGGATTCTCTTCAACTCCTCATCGCGAACCTAGCTTCCAGTTTGGGCCTAGGCCCTTTCCGTTCATAGGAAATGTGGTCAATGGCGTGGCGAATAATCAACGGCAGTATGAGATGATGCGTCCACAGATCAACAACTTTAACAAGCCTTTTCAAGATGTGTTGTCAAATACTACTAATGGAGGCAAGCTGAAGGACCGATACGCATGTAAATTCTGTGGAAAGGTGTTCCCCAGATCAGCCAATTTAACAAGACACCTGAGAACCCACACTGGAGAGCAGCCCTATAAATGCAAGTATTGTGAAAGGTCCTTTAGTATATCATCAAACTTACAGAGGCATGTAAGAAACATCCATAACAAAGAAAAACCCTTTAAGTGCCCTTTGTGTGACCGGTGTTTCGGTCAACAGACCAATTTAGATAGACACTTGAAGAAGCACGAAGGTGAAGATGGTAGTGGTGTGGTGTCAGTAGCTGACAGCCCGAGCAGTAATGAGGCTGAGAGAGAGGATACTTATTTTGATGAGATAAGGTCCTTCATGGGAAAGGTCACCTATGGAGCAGGACTATATCCACCTCAAGGTGAACCTAATGAGACAGATTCCACATCAGAGGAATGTTCACCAGCAGTATCACCAGCTGATACCCCAATAGCTATGGTCATCAGAAAACAATACTCTCCTTTATCATACAAGGATgagacattaaataataatacctcTGAGGCAGAACCACTTCAAGTAACAACTTAA
- Protein Sequence
- MRGSSEDDRSRPPAEVELRGSAGIYARELIPQGVRYGPFMGKWVPKPLDPSFAWEVRVGGNRGFLDGTLEFGNWLKYIRSTDNPDEITVRPVLSAGQVFYETVTDVQPGRELMLPPKEPLRPEQEESHSASQQSSTGEEDREEEEEDSARCPVCDLSFPDVDLLDDHLVSGHRYVGGQFRCNKCAKGYSWRPCLVQHQALQHGEVKRYPCENCNRVFTDASNLQRHIRRDHVGARSHACEQCGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCGKCGQTFSTGTSLSKHKRFCDSTSPVTSPGGMNLPQPGGNPFLMYPRPPSGLPFYPPMIHPYPTLFHNSSPGFLPNPLLFKNPEEEMHISTQLTLEAYQKFSRQRTGSSQDGSPSPTRTSSPIDAGTPSINSILSLNKVSPPTAEEAASSERPSPARPPMSANLPKLEEPLQNHILSDQAQSPVSSKAGETNDQPLDLSVGRKRSREGSPITMRRTPSPLVNKIEETPKRSKELIIKHIKDLAPSPPEDSSSSPDTNEKMPQMAYPRPIHPMFLEAIYRPQFPGFSSTPHREPSFQFGPRPFPFIGNVVNGVANNQRQYEMMRPQINNFNKPFQDVLSNTTNGGKLKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEGEDGSGVVSVADSPSSNEAEREDTYFDEIRSFMGKVTYGAGLYPPQGEPNETDSTSEECSPAVSPADTPIAMVIRKQYSPLSYKDETLNNNTSEAEPLQVTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01309649;
- 90% Identity
- iTF_00764031;
- 80% Identity
- iTF_00764031;