Basic Information

Gene Symbol
ncor1
Assembly
GCA_000696795.2
Location
NW:15948-85861[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.6e-07 0.00034 20.2 0.0 3 43 468 508 467 510 0.97
2 2 4.7e-11 3.4e-08 32.9 0.1 3 45 774 815 773 816 0.96

Sequence Information

Coding Sequence
ATGGAGGCAGTTGTTCACCTGGACCGGCCAGCCACAATGCCTTCTCAGTCTCAGATGTCTTATTCAAGAACTACTGGTTTGCATGGgaGACCAAATCAAAACCCAGAAAGAGATGTGCGCTCTTATAAATCCAACCAACCTCAGCAGCATATACCGGTTAGTAGCCACAACCCGGGACCCTATTCAGGAGTATCTGGTTCAAACTACAGCTCTATGCGTTATATTCATCCCACTCCGTATGCTGCTCCTCCTCCTGGAGCCACACCAGTCCCTTATCGTGACATTTATCCATCCAGCAGGAGCTcaaaCTTGGTAAGCGAAAGAGCTCAAAATGTGGAATTTGTTAGGGAGCAGCTAAAACCAAGAATATCGTTGCTGACCAATGCTGATTATTTGTCTTTGCCACGCAATAGACTTCATCAGAATGAAAATTACAGAGATCAAATGGGAGGTCCACCTTCACAAGCAGTTGATACTCCAATCAAGAAAATAAGACTTGGTGAACCTAAATCTGACCACCAGAGAAGTTTGCGGGTTGATACtagaGATGATTCGCAGCCTGCAGCAACTTATAATCCTCAAGTTGAAGCAATATCACCCACATTGCCTTCAGAAGCTTTACAAGAAGATGCTAATTTTCGCTCTACGAAAGATGATCTTCTTCATGGCATTGCTAAAGTTGATAGGGAAATAACTAAGACTGAACTTcagatttcaaaattaaaaagaaaacagCAAGAGCTAGAAGAAGCTGCTAAGAAACCAGCTATTAAGAAGGAGGAGGAAGAAGTACCTCAGCCTAAACATCAAAGTCCAGCTCAAAAAATATATGCTGAAAATAGGaggAAAGCTCAGGATGCTCATATGCTTTTAGCTAATTTAGGACCAACTATTCATTTGcccTTGTATAACCAGCCATCAGATACAACAATTtaccatgaaaataaaaaaaaACATATAGGGTTCAGGAAAAGATTGTTGGATCATCTGCGCAAGAAGCATATTGAAAGAGAACTTAGAGAGAAACGATTAACCACAACTTATTCGCATATGGTCCAGGAGTGGCTCAAGAAAGTAGAAAAGattgaaAATTCTCAGAAACGGAAAGGAAAAGATGCGAAAAAtcgagaatattttgaaaaaatatttccaaaattacgAAAGCAAAGAGAAGACCGAGAACGATTCAATCGGGTTGGTGCCCGTGTTAAAAGTGAAGCGGATCTTGAAGAAATCATGGATGGGCTTCAAGAGCaagaaATGGAGGATAAGAAAATGAGATCTTATGCTGTTGTCCCTCCTTTATTGTTAGATGCTAAGCAAAGGagcatttattatgttaataataatggtCGTTTAGAAGATTTTGCTGCTGATTACAAAGAAAAACAGTTATTAAATGTTTGGACACAATCTGAAAAGGAGATGTTCAAAGAAAAGTTCATGCAGCATCCTAAAAATTTTGGAATGATAGCTTCTTATTTAGATAAGAAAAGTGTTTGTGATTGCGTTCAATACTATTATCTCAGCAAAAAGAccgaaaattataaaagattgtTACggAAGTCTCGTCTAAGGCAAAGAAGTAGAAATCCACAAAGTAAAGTTAATAGCGGTACAGTTAGTACTGCTAATTTAGATATCTTAGCTACAGCTTCAGGCGTTACAACAAGATTGCAAAGGGAACAGTTACAGAAACAAGAACCCTTGGCATCAGTAGCTACAGAATGTGATAGCCACCAATCATTTATGATGGATTCATCCCTCTTAATTCCTAGtgaaGTTAAGTCTGATAAGAAGAAAGATGATTCcaaagaagaaaagaagaaaaaagaggaTGAAGAAACAACTGATGATGAACCAATTGATCCAATTGgaGGTGGTGATATGGATAACGTGACAGGTGTAGCGTGTGCTGTATGTAAAACTGAATCAGTTTGTTCTCGTGCCTTGCCGCGTTCTCAAGCAAGCCAGTATGGactaaaagaagaagaagttccTTTGGATGCTCGTGTTTGTAATTTATGTCGTTGCAAAGCTGTACGTTCCCGCTTCACAAACTGTCCTATTCCAACATGCCCCAATGCTAAGGGTCATAGAGTAAAAAGGCTACGACCCTTGCCTTGTAAATGGGCTGATTTATCTCCTGCAATTAAAGGTCCAATTGCTTCTGAAttcaAAATTGATGAAACAGTGGCTAAGTGCTGTTCAGCCTGTTTCAACAGAATTTCTAGACGCATTGCAGTGTCAATGGATATAAATAATTCCGCACCTGAGGATGCTCAAATGTTGAGTCCCAGTCAGTGCTCACTTTATCTGCAATGGACAGATGAAGAAATAGAATCCTTAAAAAATGCTATTAAACTTCATGGTATGAATTGGCATGAAGTATCTCAGAGTGTTGGAAAACCACAGCATCATTgcatgaatttcttttttacttatcaGCAGAAGCTGGGTTTGGACCAATTGATTCCTAATGAAAAGataaatgcTGATGAAAGAAAACCTGTTCTTACTGATGAGGAGGAATCAGGATCTAGTACTTCTAGTTGTGATGAAGTAGGAGCTACTGGTGGAGTTGGAGTTGGTGGTGATAGTGATACAGCTAGTGCTCCTTCACCTCTTCAAAATGCTGAAAATGTTGAACAACATCTTGCAGAGAATGAAGATAAAATGAGAACTATGAATATTACACCACCTCTTCCACAAATAGTTCCTGAGGCTAGAGAACAAACTTCTCATCCAGAGCCTCTTGAACATAATCAGTCAACTTCTTCACCGCAACCAAAAGTATCCACTGCCTCCATGCCACCAACATTATATGCTGCTAAAGAGGATTATGACAGTTCAGCTACGACAGCAGATGAAGGGCAAGGCGGAGGTGAAACTGAGCCGACTACTGTTCGAACAGCTTCACCTAAGAGGGAAGATCCTTCATCCCCCCTCACAGTGAAGACGGTCAAGGATCTTATGCTTGGTGTTATTGAGATGCAATTAATGAAAGACCAAGgAGGACAAGTACAGACGAGTAACACCCCAGGTGCTCCTCCTACTATTTCTTCAATCCTTAAAACAGATCatcataatttaagttattcccAGCGTGATAAAGGAAGTAGGCAAATTGATAATTCATTGGCTACTGTATCTGTTGTTAATACTCATCATAGTCATCAGCAAATGCAAGATATTTCAAAGGAAGGTCTTGTTGTTGTTcagggtATTCAACCTTATGATCAGACTTCAGAATGTCCTGAAGATCGTTCCCATCGATGGTCATCTTCATCAGATATATCTGGAAGAATTCCTCAGAGATTTTCAGATCTTCCCCCAGCCTCTTGTGGAACAATGCCCATGTGTAATGAGGATTCGGTCCAAGGGGAAAAGATATCTAAGgtTCAGCAGAGTATGAGAGAGACCAGAGATACTGATGGTGTAACATTAGATTTGAGTATAAAGAAGCCTAGAGAAAACAATTTGCAACCTTCTAAAATTCAGCAGCATCCAATTTCATCCCAGAATACCGTATTTAGAGTAGCACAGCCCCCCGATCAACAAGGTTTCTTTCATCAGcaaGTATTAGCTACGACTTCCTTAACTCCTAAGTTATCTCCTGGTGTGATAAGTGGAGGGAATAATCCTGCTACCTCAAAAGCACAATGTGGATCAATTATTCATGGTACTCCTGTATCATCACCCAGCCTTTATTCTCAAGGTCGTTATGAATCTTCACCATCTTCTTTAATTCATCAAGTTCCAACACCTCATAAAGAGAGTGGATCGATAACACAAGGTACTCCAGTACACCAAAGGAGTTCATTGTATCCTAATCCTGAATATTTTGGTAAAAGAAATTTGCCTACCACAGGATATTTTTCaccaaggccatcttcttataatgTGGAACAGCGacaaattattatgaatgaCTATATTACATCTCAGCAAATGCATGGGCCGGGAAATTCCTCTGGTCCTCGATCTGGAAGGGATAAAATGTATTACCAAACTAACACTAGACAAGGAGTCATACAAAGACACAATACAAAACCTCCAAGCCCGGGTGTTAGTCATTATCCTCCTGGTCATGAAGCATTTTCTTCCTTAGTTGATGTAGCTGTTAGGCAGCCTAGCTTACCAGTACCACCAACTATGTCGATGCCTATGGAACATAAGAATATGCAAGATGAAAAAAGACATCTTCATGAAGGTCTGGGGGAAAGATTTAACAGGGATAGTCCCCATGATAGGTTTTCAAGTAGAGAAACTGATAGATATATGAGGGACTCGCAGAAAGTACTTACTCCACAACAACAATCTGCCAGTAGAGAACAAgctcaacaacaacaacaacaacaacaacaacagttAAGGGAACAAGTTTCTCATGGAGCTAGAGACAATTATCAGTCTTCACATCATATTGACCGTGAAGTTCAATTGCAACAGTTACAAAGGGAACAATCAATGCATCGTGACAGGGAGCATCACAGTCAACAATCACAGAAGTTACGTGATTCACACATGCCCCATCTTGAATTGCGTAGAGGTCAAATGCCTGGATACCAACAAAGGATCATCCATGAGGGTCATCATGGTATAGATCAGCGTTTAATGCAAGCTCCCAGTTTCCGTGAACAACCTTCTTCATCACAAAGTGGTTCAAACCTTTCATCTCGAGGTCATCCTCCTCAAGAACAAAGtaatgaaCAACCTAGTAATCGTGGCCGTTGCACTGAAAGTTCTACATTAACTGCAGCCAGTCTAATTGATGCTATCATTACTCATCAAATAAACCAAACAACTTCTGATGTTCAAACGACTACAGTTCCATCAGGCACTACTACTGCACCTCAGCCTCCACCAACCAGACCTGGTGATAGACTTTTCCAGagTTTTCATAAAGATTGCACTGAATCGAATGGTAAACTTTCTCCTGTCAAGTCTCAAGAAGGACCTAAAAGTCATTCTGTTACACCTCAGTCCATGCAATCTCCAATTATTGATCATGTTGATATGTACAATAATCCAGGGGCTCCTCAAGGCATGAGACCGGCAATGTATCCAGGATTTGACCAATTAAGACGTGCATTACAACAAAAAGATCAGAATCAAGCTCTAGAAAAAAGTGATGAACATATGACTCGCTTTTTTTCTGAAGCGCCTGTTCCACTTTCACCTCTAGACTATGTTAAAAATCGCATTGCTGAAGTTATGAGAACTTCAGAAGAGGAAAGTGGTGGCAATAAAGACAATGAAAGTCCAGTATCCACTGATATTATGCAGGATGAGGCTGATCATTCAGCTGGACATAGCACCTCCTCATCATTTTTAACCCCATCTCATACCTATGCTTATCCTTTTAGTGCATTAAGTTTGAACACCAGTGGAGCGTCTACAGTCCCTATTCCAAGTCACACTGTTACTAAAACCACTGAATCAATTCCTGAACCTGCTCCTCTTCTTTCTGCCCAATATGAACCATTATCTGATGAGGATTGA
Protein Sequence
MEAVVHLDRPATMPSQSQMSYSRTTGLHGRPNQNPERDVRSYKSNQPQQHIPVSSHNPGPYSGVSGSNYSSMRYIHPTPYAAPPPGATPVPYRDIYPSSRSSNLVSERAQNVEFVREQLKPRISLLTNADYLSLPRNRLHQNENYRDQMGGPPSQAVDTPIKKIRLGEPKSDHQRSLRVDTRDDSQPAATYNPQVEAISPTLPSEALQEDANFRSTKDDLLHGIAKVDREITKTELQISKLKRKQQELEEAAKKPAIKKEEEEVPQPKHQSPAQKIYAENRRKAQDAHMLLANLGPTIHLPLYNQPSDTTIYHENKKKHIGFRKRLLDHLRKKHIERELREKRLTTTYSHMVQEWLKKVEKIENSQKRKGKDAKNREYFEKIFPKLRKQREDRERFNRVGARVKSEADLEEIMDGLQEQEMEDKKMRSYAVVPPLLLDAKQRSIYYVNNNGRLEDFAADYKEKQLLNVWTQSEKEMFKEKFMQHPKNFGMIASYLDKKSVCDCVQYYYLSKKTENYKRLLRKSRLRQRSRNPQSKVNSGTVSTANLDILATASGVTTRLQREQLQKQEPLASVATECDSHQSFMMDSSLLIPSEVKSDKKKDDSKEEKKKKEDEETTDDEPIDPIGGGDMDNVTGVACAVCKTESVCSRALPRSQASQYGLKEEEVPLDARVCNLCRCKAVRSRFTNCPIPTCPNAKGHRVKRLRPLPCKWADLSPAIKGPIASEFKIDETVAKCCSACFNRISRRIAVSMDINNSAPEDAQMLSPSQCSLYLQWTDEEIESLKNAIKLHGMNWHEVSQSVGKPQHHCMNFFFTYQQKLGLDQLIPNEKINADERKPVLTDEEESGSSTSSCDEVGATGGVGVGGDSDTASAPSPLQNAENVEQHLAENEDKMRTMNITPPLPQIVPEAREQTSHPEPLEHNQSTSSPQPKVSTASMPPTLYAAKEDYDSSATTADEGQGGGETEPTTVRTASPKREDPSSPLTVKTVKDLMLGVIEMQLMKDQGGQVQTSNTPGAPPTISSILKTDHHNLSYSQRDKGSRQIDNSLATVSVVNTHHSHQQMQDISKEGLVVVQGIQPYDQTSECPEDRSHRWSSSSDISGRIPQRFSDLPPASCGTMPMCNEDSVQGEKISKVQQSMRETRDTDGVTLDLSIKKPRENNLQPSKIQQHPISSQNTVFRVAQPPDQQGFFHQQVLATTSLTPKLSPGVISGGNNPATSKAQCGSIIHGTPVSSPSLYSQGRYESSPSSLIHQVPTPHKESGSITQGTPVHQRSSLYPNPEYFGKRNLPTTGYFSPRPSSYNVEQRQIIMNDYITSQQMHGPGNSSGPRSGRDKMYYQTNTRQGVIQRHNTKPPSPGVSHYPPGHEAFSSLVDVAVRQPSLPVPPTMSMPMEHKNMQDEKRHLHEGLGERFNRDSPHDRFSSRETDRYMRDSQKVLTPQQQSASREQAQQQQQQQQQQLREQVSHGARDNYQSSHHIDREVQLQQLQREQSMHRDREHHSQQSQKLRDSHMPHLELRRGQMPGYQQRIIHEGHHGIDQRLMQAPSFREQPSSSQSGSNLSSRGHPPQEQSNEQPSNRGRCTESSTLTAASLIDAIITHQINQTTSDVQTTTVPSGTTTAPQPPPTRPGDRLFQSFHKDCTESNGKLSPVKSQEGPKSHSVTPQSMQSPIIDHVDMYNNPGAPQGMRPAMYPGFDQLRRALQQKDQNQALEKSDEHMTRFFSEAPVPLSPLDYVKNRIAEVMRTSEEESGGNKDNESPVSTDIMQDEADHSAGHSTSSSFLTPSHTYAYPFSALSLNTSGASTVPIPSHTVTKTTESIPEPAPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-