Basic Information

Gene Symbol
-
Assembly
GCA_000696795.2
Location
NW:6171-10953[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.023 35 4.4 0.0 20 48 65 94 52 104 0.77
2 5 0.0011 1.6 8.6 0.1 7 43 109 147 103 155 0.82
3 5 0.071 1.1e+02 2.8 0.0 8 43 139 176 137 182 0.80
4 5 0.005 7.8 6.5 0.0 6 43 195 234 191 242 0.82
5 5 0.018 28 4.7 0.0 7 48 254 297 249 339 0.78

Sequence Information

Coding Sequence
ATGATGAACGAAACTGTCCAATCAGGTCCATCTACTAATCTTGATCACTTACAAAATGAGATACATCAGATTAACATTTCTGTTATGCATCATCATGCTCAGGAGAAGGCTTATCAATGTCAACATTGTGACTACAAAGGAAGCATACCATTTGGTTTTGAAAAACATATGATGCCTTGTAATTCAGTCGAAAAGCACCAACAGTGCCCTCATTATGAACATATAACAGTTGaactttgtaatttaaaacaacacatAGAGACCAGTGGTACTAATAAGAAGcctaatcaattttataattgtggACATAAATCAGTTAAACAtgcaactttaaaaaaacaaatgatggCCAGACATACTGaagagaagcctcatcaatgtcctcattgtgaatataaatcagttaatCTTAGCcatttaaaacaacatataatgGCCCGACATACTAATGAGAAGcatcatcaatgtcctcattgtgaatataaatctgttcaagttagtaatttaaaacaacatataatgGCCCGACATACTGATGAAAAGTCTcttcaatgtcctcattgtgaatataaatctgctcaaattagtaatttaaaacaacacatAATGGCACGTCATACtgatgagaagcctcatcaatgtcctcattgtgaatataaatcagttcatCTTAGCCATTTAAAAAGACACATAATGGCCAGACATACTGGTGAAAAGCCTAATCactgtcctcattgtgaatataaagctGTTCAAGTTAGCCAATTAAAACAACACATAATGGCCAGACATACTGGTGACAAGCCtaatcaatgtcctcattgtgaatataaagctGTTCAAGGttgccatttaaaaaaacacataatggcCAGACATACTGGTGACAAGCCTAATCAATGTCCtaaatgtgaatataaatcagttacGAAAGGTGTGAAACCTCATCAATGTGCTCATTGTGGATATAAAGATGTTCAAAAAGGTGATTTAAAAAAGCACATAAAGGCCTGTCATACTTATGGGAAGCCTCAttaa
Protein Sequence
MMNETVQSGPSTNLDHLQNEIHQINISVMHHHAQEKAYQCQHCDYKGSIPFGFEKHMMPCNSVEKHQQCPHYEHITVELCNLKQHIETSGTNKKPNQFYNCGHKSVKHATLKKQMMARHTEEKPHQCPHCEYKSVNLSHLKQHIMARHTNEKHHQCPHCEYKSVQVSNLKQHIMARHTDEKSLQCPHCEYKSAQISNLKQHIMARHTDEKPHQCPHCEYKSVHLSHLKRHIMARHTGEKPNHCPHCEYKAVQVSQLKQHIMARHTGDKPNQCPHCEYKAVQGCHLKKHIMARHTGDKPNQCPKCEYKSVTKGVKPHQCAHCGYKDVQKGDLKKHIKACHTYGKPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00764232;
90% Identity
iTF_00764232;
80% Identity
iTF_00764232;