Basic Information

Gene Symbol
Arid2
Assembly
GCA_000696795.2
Location
NW:216083-221193[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-25 8.9e-22 76.8 0.0 1 89 26 112 26 112 0.95

Sequence Information

Coding Sequence
ATGAGGGATAACTTCAATAATAGTGTTTCTACCATGGCGACGCAACTTAATGACGACAAAACAacttatgaaaaagaaaaggagaGGTTTATCAAGGAGCTATTTCATTTTCACGAGACTAGAGGAACTCCTTCAAGGAAAGTGCCAAAAATAAGTGGGTATGaagttgatttatatttattgtataccaTTGTTACTGGTAAAGGAGGTTGGGTTAAAGTTAATAGTAGAAATGAGTGGGACCAGGTATTAGATGAGTTCAACATTCCAAAACATTGTGTTAATAGTGATGTTGCTATCAAACAGATATATTTAAGATATCTCGATAGATATGAAAAGATTCATTTTCATGGCGAACTCGGTGTTGATGATGATGAAATTAGCAGACACAGGCAGTGGTCAGCTAGAGCTTTACATTCCATCCCTATGACTTACAATCACACTCAGCACAATGTAAATGAATCTCTGAGAGGAACCAATGGCCTATCTGTTAATTTGTATCAACCTTCAGAATATGATAAACTTTCTTTATCACTAATTTCACCTTTACCAAATGAACAAGATTTTGCAATTAATGTAtgcacattgctgtctaatgaaGGAAAGCATTGTTTAAAACTTAAGAAGCACTCAAGAATTCTTCATTACTTGCTTGCTCATGCAGCTGTATTTCATAATCCAAGTCTAAGAGCACTTTTCCATgaaatatatggaaaatatcGAGGTCATTCTATGAGTCATTTGTGGCGTGATATTATCACTGATGAAAGTATTTTAAAGTTGACTGATGAATCATTGTATGTAGAATGGGAAGATGCTGTAGAAGATGGTAGTGATGCTGTTTCAAATAAAACTGGATTGACCTTTGAACCAGAGgacaaagaattattttgtttaggtAGAACATTAGGAGTTCAAGACTATATAGGGCAGAGAGTTTGCCAAATTGCTGCCATTTTACGTAATTTAACGTTTGTAAATGAAAACATGGTTTTGATGGGTAAAGATACTacatttttacgttttataattctttgttGTTATTCAAGGTGGGACTCTTTACATCAAATGGGTTGGGATATGCTTTGTAATATAGCAACAGAGATTACTGAAAGAGCTCCGATTATGGAACATGTTTTAACTTTAACTAACCAAGGGTTGCTTTCAGAGGACAGGGCAGATATACTCTCAGCTCTTGAAGTATTGACAAAATTggcacaaaatgaaataaatgaagaactttTAGTTAAACATTTGGTAAGGGAAATTTATGAACGTATTTGTTCTTTTCTAACATTACATGATATAATGCTGCTTGTTTGTACTCTGGAATGTCTTAATGCAATTACAGCACTTGGAGAAAAGGCTTGTAATTCAGTATTAGCTGTTCATGGTATCATTGATGTACTTGTATCACTTGTGAGTGTTGAAGCTCAGAGTTATGGTCCTAAGGCATGTATTCAAATGAGAGTCGTTGAAACAGTAAGAGATTATAATTCGGTATGCCCTCCTTCACAAACCCAACCACAAACCTCAACCAGTATCAGTTCAACTCCATCTACACCAATAGCTGCTTCTCAGCCTGCCCAAACGCAGCCAACTTACACAACACCTCTTTCTGCTCAGATTTCCTCTCCAGCAGTTTCTGGTAGTGTTTCTCACCAGACTCCACCACGATCTCAACAAGTTATTCTAAATACTCAACGAATTATTACTACTTCAGCTTCTACTATTTCTGCTCAGGCTACGGAGCAAATAGCTCAAGAAAATGAGAAGTTTGCATTAGCTTGGCTTAGATGCACCTTTGAACCTAGCACTAATGGTAAGGTGGAACAAGCTGAACTGTACAAGCAGTATATTAATTACTGTGCTAAAATTGGAAGAAGAGGTGTTATAGCACCTCTTCATTTTCCCCGTATTGTAAGGACTGTGTTTGGAGGAAGTGTTGGTCCAAAAGTTATTACTACTGGGGAATTAACTCAGCATTTTTATGAAGGAATTCAAATGAGGGTTAAGCCTTTAACTTCCATTTCATCAACATCAAGTCTTGTTCATTCTACACcatcatcaattttaaaagctCAGTTGAGTGCACCCCCTAAACCAACACCCACAACTCCAGTCAAAATGCAAATTGTTGGAGAAGGTACATCACAGGGGCCCACTTCATTTATGAAAACTCTTCTAGCCAATAAAATTGCAGAACatcaaaaacaacaacaattacAGCAGCAACAGCAGCAATTGCTCCAGCATGACCAACAGTCAGAAAAACAAACTGAAAGTCAGCCGAGTGGTACCATTTCATTTGATGACTCATCTCAGTCTTCTACCACTCAAGAAGGTATCACTTTCAAACTGAATGGTATTAGATCACTTATGGAAATCTTAGGAAAACCTGATAATGCCTCAGGAAATGTTAGACCATCAACTGTCTTTAGTAGTCCTGTTAACACAATAAGTTCAAACTCGGTTCTACCTGAGGAAGCCTCTACTAGTAATTCGAGCTCTATACGTTGTGATGTAAGTGAAACTGGAACTGAAGAAAATTCCAAAAGTAGTATTGATGGTTTTCTTAGCagtattagtcaaaattgtttgtcttcagaaaatactttaaaagaagccaaagttgaattaaaaactgaattaaatgGTTCATCTTGTGATGCTCTGATAGAAATTAAGGATGAAAACATTATTGCGAATGGTATTcctgtaaaagaagaaaaaagagaaacttCTAAAAGGCCTCTTGATAAAGAAGATGATGTAGTCTCAAAAAAGCCTCACCTCAATGGAGATGAAATAGAGGAAACATCTGAGCAAGTTAATGTCTCTTCTTCGGCTGCAAATTTATATGCTGCCCTTGCAGCAGATGTTTTGGAAGATGAACCGCTTGAAGAAACAACTCCTGGACCTGTACAAGTTGCCACAACACAACCTACACAAATTTTAGTGACAGCTGGAGGACAGTTAACTCAAGGAGTTGTTGTTGGTGGACAGTATGTTGTCCCTCAAGCCAAAACCATTGGGCAAGATCAAAAACAAACAGTACTTGTTGCACAGACTACTCAACAACAAGGAACTTCagcaaaaactataataattttacaacctCAAGGACCATCTGTATCCAATTCATCACAACAAGTTATAAGGCTTCAGTTCCCCTCTCCTCCATCAGTTTTACCACCAACTCAACAGTCTTCAAACATAATTAGGGCAATTGTTCCACCAAAATCTACTGCTAATATACCAGATAGTATTTCAAGGGTTTGCACTTCTATTTCTCAGCCCACTGTCACATTACCTACGGTGCCAGCACCCTGTGCAACATTTGTCAGTGTTTCTTCTTCCGCATCAAATTTTGCTCCATCTGTTAGTTCTACAAGCCAGTTGGTAAAACAAGATACTAAGCCTGCTGTAGAGCAGAGACATTTTTTGTGTGAATGGAGGGGCTGTATGCGAAATTTTAATACAGAAAATGAAGTTTATATACATGCGTGTGAAGCTCATCTTCCTCAAGGTAGCGAAGAAATTCAATGTTTATGGGAAAGATGTGATGCCATGAAACGGAAGCGGTTTTCTTTGATGACTCATCTTTATGATAAACACTGTAATCctgatgaaatgaaaatggttGCTGCTAGAAGAAAACAATTGTCAGTTACTGGTAAAAGTGAGCTGCCTACGCCTTCTCAAGCTATGCCCCATCCAGGCTATGGACCTAATGCTGCATATCACGCTATTAAGCGTCATGCTttagatattgtaaatataaaagatccCCAACAACGAGTTGTGAAACCTGGACCCGCTCCAATTCCTGTTCCAACTGAGCAAACAAGCAACGAGGGTCCTGTTACTAAAAGTATTAGGTTGACTGCATCTCTAATTCTTAGAAACCTTGTTGTTTATTCTACAAATGGACGAAGGCATCTTATGAGGTATGAATCATTTTTAGCTTGTATAGCATTGAGCAATGTGGAGTCATCTCGCACCATAGCACATGTGCTATTTGATTTATGTAACTCCAGGTGA
Protein Sequence
MRDNFNNSVSTMATQLNDDKTTYEKEKERFIKELFHFHETRGTPSRKVPKISGYEVDLYLLYTIVTGKGGWVKVNSRNEWDQVLDEFNIPKHCVNSDVAIKQIYLRYLDRYEKIHFHGELGVDDDEISRHRQWSARALHSIPMTYNHTQHNVNESLRGTNGLSVNLYQPSEYDKLSLSLISPLPNEQDFAINVCTLLSNEGKHCLKLKKHSRILHYLLAHAAVFHNPSLRALFHEIYGKYRGHSMSHLWRDIITDESILKLTDESLYVEWEDAVEDGSDAVSNKTGLTFEPEDKELFCLGRTLGVQDYIGQRVCQIAAILRNLTFVNENMVLMGKDTTFLRFIILCCYSRWDSLHQMGWDMLCNIATEITERAPIMEHVLTLTNQGLLSEDRADILSALEVLTKLAQNEINEELLVKHLVREIYERICSFLTLHDIMLLVCTLECLNAITALGEKACNSVLAVHGIIDVLVSLVSVEAQSYGPKACIQMRVVETVRDYNSVCPPSQTQPQTSTSISSTPSTPIAASQPAQTQPTYTTPLSAQISSPAVSGSVSHQTPPRSQQVILNTQRIITTSASTISAQATEQIAQENEKFALAWLRCTFEPSTNGKVEQAELYKQYINYCAKIGRRGVIAPLHFPRIVRTVFGGSVGPKVITTGELTQHFYEGIQMRVKPLTSISSTSSLVHSTPSSILKAQLSAPPKPTPTTPVKMQIVGEGTSQGPTSFMKTLLANKIAEHQKQQQLQQQQQQLLQHDQQSEKQTESQPSGTISFDDSSQSSTTQEGITFKLNGIRSLMEILGKPDNASGNVRPSTVFSSPVNTISSNSVLPEEASTSNSSSIRCDVSETGTEENSKSSIDGFLSSISQNCLSSENTLKEAKVELKTELNGSSCDALIEIKDENIIANGIPVKEEKRETSKRPLDKEDDVVSKKPHLNGDEIEETSEQVNVSSSAANLYAALAADVLEDEPLEETTPGPVQVATTQPTQILVTAGGQLTQGVVVGGQYVVPQAKTIGQDQKQTVLVAQTTQQQGTSAKTIIILQPQGPSVSNSSQQVIRLQFPSPPSVLPPTQQSSNIIRAIVPPKSTANIPDSISRVCTSISQPTVTLPTVPAPCATFVSVSSSASNFAPSVSSTSQLVKQDTKPAVEQRHFLCEWRGCMRNFNTENEVYIHACEAHLPQGSEEIQCLWERCDAMKRKRFSLMTHLYDKHCNPDEMKMVAARRKQLSVTGKSELPTPSQAMPHPGYGPNAAYHAIKRHALDIVNIKDPQQRVVKPGPAPIPVPTEQTSNEGPVTKSIRLTASLILRNLVVYSTNGRRHLMRYESFLACIALSNVESSRTIAHVLFDLCNSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00165025;
90% Identity
iTF_00165024;
80% Identity
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