Hrub014679.1
Basic Information
- Insect
- Halictus rubicundus
- Gene Symbol
- CSRNP3
- Assembly
- GCA_028454235.1
- Location
- CM052180.1:12148755-12153384[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.15 2.7e+03 -2.0 1.6 62 114 359 390 341 420 0.44 2 2 8.4e-85 1.4e-80 270.2 6.8 24 218 653 840 647 840 0.91
Sequence Information
- Coding Sequence
- ATGGAATCGCCTTCGGCAGAGGAGCGTCTTGTCGAGGCCCAAGAGGATTCCAGCTCGATAAGGTCGCCGGGACCGGTCGCCGAGCCCACCGAGCCCGTCGACGATGCCGGCCCGACGGCCGATCCCGAGGACGTTGCTCATCGATCGTCCAGCGGCGACGATGACGCCGACAGTGCTGTGCTATGTCCCGCGTCCGAGAACGTTACTTCGGACGCCAAGATGAACTCTGAGACCATGGGTCCGACGCCGGAGAAGTGCGGCTCGATGGCGAAGGTTGAGGACAATGCGGACGAAACGAAGACGAAGGAGCCGGTCGAGCCGCAGAATTGTGCCGACGCGACCACGCCGACGAAGTGCCTGGAACAAGAAGAGGATCGCGTGATCGACAGTGGGGGTGGCGTGCTGATAGGCTCGCCAGTGTCGAGGAAGAGGCCGGCCAGCGACTTCCTGCCAATCAACGCGGAGATCAAGCGGATTGGCGTCGAGATCCCGGAGAACGAGGGGAGCAACCAAGTGAGGAGCGACGTGAGGAGGATCTCGCCGGTGCTGGTGAGCCTCCGGGAGCGCACCCTGGGCGAGATATCCCTCTCCTCGGACTCCTGTCTGTTCGACGACGACGTCGGCGCTCGGTGTCTCTCGCGGAACGGCAGGTTGCTAGACAACTCGCTCTCCACCAGCTGTAGACTGAGCCTGAACAATTCCGTTGAACACGAGGCCGGGATCATCGGCACGGAGCCGAGGCACTACGGAGTGTCCACGCCGATTCAGGAACGCGTGAACGGCGAGGACGAGGTGGACCGGGGTTGTCGTCGGAACCTCGAGTTCACCGACGCGTTCACCGACGAGGACTCTTGTTGCTCGCTGCCCGGCGAGTGTTCCGAGAGGGATTACCGGCCGTGTCAGGAGAAACAGTGCGAGGAGCCGATCGAGACGTGTCCTTGCAAGACCAACGGTGCCGAGGATGGTCCCAGCAGCGCGGATCAGACGAAGGAGTCGCGACCCTATCTGGTGGTCATGCTGGAGCGAGTCGACTGCTCGAATATCTTGACGCCGGACAAGTCCGACAAGAAGAGGCTGAACAACAAGAAGAAGCAGAGGAGCGACGAAGACGCTGCGCAGAACGTGGAAACGGAGCCGGAAGACGCGTCGAAGAAGTCGAATTACGTCCAGAGGTGCAGCCCCGAGAAGAAGATCGTCCAGATGACCGAGCAAGAGTCGGCGAACAAGCAGCTAGGTTCGCCCATAGTGACCAGGTCGAAAACGCCGCCCGTTGAATTGTTCTCGCCGTCGCTGGGTGACATGAAGCAGTGCAAAGTGGTCTTGGAGAAGCTGGGTACGTTGCCCAAGGTGCGAACGCCGGAAAAGTCGACCAAGGATGAAAGTACGGCCGGATGCGCGAAGAAGAACGAGGACCAGGTCGAGGAAGCCGCGTCACCCGCATCGATAACCTGCACGGAGAGTCTCCAGGTGTCGAGCAAAAGAAATTCGTCCGACGCGCGACCCACCTCGCCTGTAGAGCCTCTGGAAGCTTCAACCGATGCCGCGGAGGCTGTCGATACCGAGACAGAGACTGAGACCGGCTCCGACAGCTCCGAGGTGTCCTCCATGACGAACGTGCGTCTTCGTGCATGCGACGACGACGCCGTTTCCGACCAAGTGTCTTGCCCCGAGAGCGAGTCCATGTGCTGCGTCGACATCAATCCTGAAATCATCACCAGACTCGAGGCGGAGAGGCCGGAGGCTTTCACCGAGGACTCCGCCGAGAGTCTGGCGCTTGCCACGGGTGCTAGGGACGAAGTCAGGTCCGATGGCAGCGATTCCGGACTGGGCAGCGAGATTCCTGGGGATCCTGGACCTGCGCCGGCACCTGAAAGCGATTCCGAGACCTCGTTCTTGGATAGGATACCTGACGATATTCTATCCGATAAGGAGAAGGCCGTGAATCAACTGGACGGTTTCGTCCCCAACATAGGCGGCAGTACACTTGGTATGAGCGCGACGCACACCCACGCTGAGAGGTTCTCGTTGTCCGAGCACGCTGCTGAGCAGAGGCGGATCCATCGTGCCAGGTTGGCCCAGCTGCGTTCTGAGCGAGCTGCGAATTGCGTTGCCGAAGCGGCGTCCAGCTCCGAGGACCCCAGCGACGACACCGACGAGGAGCAGAGCGACAACGAGGAGCTCGACATTGACAGCTACTACTTCCTGCAGCCGGTCCCCACGTGGCAAAGACGGGCCCTGCTCAGGGCTGCCGGGGTGCGAAGAATAGACGGCATCGAGAAGGACGAGTGCAGAGACATCAGAGCCAGCAGGGAACACTGCGGCTGCGGGTGCAAAGGGTACTGCGATCCTGAGAGCTGTCCTTGCAGTCGTGCGAACGTAAAGTGTCAGGTCGATCGAGCCGGGTTCCCGTGCGGGTGCACCCGCGATGGCTGCGCGAACAGTTCGGGCCGGATCGAATTTAATCCAGTACGCGTGCGGACGCATTTCATTCACACGCTGATGCGGCTAGAGCTGGAGAAGAAACAGCGGGAGGAAGAGGACGGTACGGATCATGATGCTTCCGACAATCAGAATGGTAGAAGTCCCTTGAGGGAGATCAATTTGGGTTCCGTGATGGAGAATAGAAATACAGAGTCGTGTTTGAACGGTGGCGGTTTCACGACGCTGCATTACGAGAACCACGATGCCGGAGACGGTGGGCCAAATTGTCAGCCAGACGTACCTGGCGCCAGAGAGGATAGTCTGGATCTGTACGCGATTAGAGATGATTGTTATCCTAGCGAGGACACTGTCGATGGTACGCAGGGACCTCAAAGGAAACTACATCCTGAGTTTAGTCAAGCATTTCAAACGTTCTCGGGGCAAACCGGTGCCGGTGTGAACTTCCAGCAGCCCGCTTATCAGGACTACCAACCTTACGCTAACCTTCCTTCTACGTCTAGGGTGCAATTCCAGCCGCAGTTTCAAGCGGTACCAGGAACACCCGGGTTCTCGCATTACGCGACCTACGGGCAGGACGCCGCAGCCACGCTACAGGGGAATTGCCAGGTCCATCCAGGCCAGCACGCTACCGCTTACGAGACCACATTCGCCCAGGACGAGACGACCGGATCGCAGTACACAAACCTGAACTCGGTACAGCCGCACGCAGCTGTACAGCAGATTGGCAAACTGGAACCGTTCTCCGAGCTGCTCTCCGGCAGATACTCGTACTACGGTGAAATGGAACCGCAGGCGCACGGTACTTACCACGGAAACGGAACGAAGGTCGAGGTAGAGAAGGGCCAAGGTAACGAGCAACAGTCCGAGGGCACGGAGGAGTGCGACGAGAACTTCGGGGAGATTATTAAAAAGTCGATGGTCGAGACCGTGTCCGCTTAA
- Protein Sequence
- MESPSAEERLVEAQEDSSSIRSPGPVAEPTEPVDDAGPTADPEDVAHRSSSGDDDADSAVLCPASENVTSDAKMNSETMGPTPEKCGSMAKVEDNADETKTKEPVEPQNCADATTPTKCLEQEEDRVIDSGGGVLIGSPVSRKRPASDFLPINAEIKRIGVEIPENEGSNQVRSDVRRISPVLVSLRERTLGEISLSSDSCLFDDDVGARCLSRNGRLLDNSLSTSCRLSLNNSVEHEAGIIGTEPRHYGVSTPIQERVNGEDEVDRGCRRNLEFTDAFTDEDSCCSLPGECSERDYRPCQEKQCEEPIETCPCKTNGAEDGPSSADQTKESRPYLVVMLERVDCSNILTPDKSDKKRLNNKKKQRSDEDAAQNVETEPEDASKKSNYVQRCSPEKKIVQMTEQESANKQLGSPIVTRSKTPPVELFSPSLGDMKQCKVVLEKLGTLPKVRTPEKSTKDESTAGCAKKNEDQVEEAASPASITCTESLQVSSKRNSSDARPTSPVEPLEASTDAAEAVDTETETETGSDSSEVSSMTNVRLRACDDDAVSDQVSCPESESMCCVDINPEIITRLEAERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGDPGPAPAPESDSETSFLDRIPDDILSDKEKAVNQLDGFVPNIGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVAEAASSSEDPSDDTDEEQSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDGIEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEDGTDHDASDNQNGRSPLREINLGSVMENRNTESCLNGGGFTTLHYENHDAGDGGPNCQPDVPGAREDSLDLYAIRDDCYPSEDTVDGTQGPQRKLHPEFSQAFQTFSGQTGAGVNFQQPAYQDYQPYANLPSTSRVQFQPQFQAVPGTPGFSHYATYGQDAAATLQGNCQVHPGQHATAYETTFAQDETTGSQYTNLNSVQPHAAVQQIGKLEPFSELLSGRYSYYGEMEPQAHGTYHGNGTKVEVEKGQGNEQQSEGTEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00862556;
- 90% Identity
- iTF_00762544;
- 80% Identity
- -