Hrub003747.1
Basic Information
- Insect
- Halictus rubicundus
- Gene Symbol
- CAMTA2
- Assembly
- GCA_028454235.1
- Location
- CM052186.1:970571-981900[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-44 6.1e-40 135.5 0.5 10 116 30 134 27 134 0.98 2 2 0.67 1.2e+04 -4.0 1.4 21 21 304 304 280 338 0.55
Sequence Information
- Coding Sequence
- ATGATGCCGACTAACAAACCGGTACTGTCAGCAGATACCCCCCAAGCCCCAGCAAATAAATTAACTCCTCCTGAAGAGCCCCGTGGAAAAGAAATTGCGGCCATCCTGATCAGTTTCCAAAGACACGCGGAATGGCAGAGTCGGGAGGTAAAGGTGCGACCTCGAAGTGGGTCGATGTTACTGTACTCGAGAAAGAAGGTCCGTTACCGGAGGGACGGTTACTGCTGGAAGAAGAGGAAGGACGGGAAGACGACACGGGAGGATCACATGAAACTGAAGGTCCAGGGGGTCGAGTGCATCTACGGCTGTTACGTGCACTCGGCGATCCTTCCGACGTTTCATCGGCGATGCTACTGGCTACTGCAGAACCCGGACGTCGTTCTCGTTCACTACTTAAACGTTCCTTACCCGGACGGCGATGCGAAGCTAGCTGCGCTGCCTCCCTGTCTCGCTCTACCGCCAGACAAGAAAGAGTGGACGCGAGACGAGCTGGCTTCTCAACTTAGACCCATGTTCCTCGGTGGGGATGACGATCCGAACAATCCTCATCTCACCCAACATTCGAATCATCCCGTCGACATGATCGTTTCGCAGCTGCTCGACAGGCAGCGCGCGAACTCCACTTCCTCCACCACCGGCACTCAGCTTGCACCTAGGAGACTAACACCGGACAATCAGGTAACTTCGACAACCGGAGGGCAGCAATCGTCGACGACAGCGTCACCGGCGCCGCGCGTATACTCAAGACATTACCACACGGCCCAAAGCCAGCAGCCGGCTCCTTTAGTGTTAAGTTTGcaacaaatccaaggtggtggcggtcttctgattctgaacagccaaccgtaccaccaccagcagcagcagcaacagcagcaacaacagcagcagcagcagcaacagcagcagcaacaacaacagcagcaacagcaacaacagcagcagcagcagcagagccaacaagtggagatgcaacaggtcacggaacagcagatcgtgcagcagacaagtgtcgaaagggagcaacagatcaaacaggagatcgacgcgcaggagagcatggatcgcaccgcggtgcagacgttgcctatcggtggcgccgGCACCGAGGTCACCGATTTCGCCGAGACCTTGGATCTGAATCAGGAGGACATCCAACGGACGTTGTCCGCGAACATGGTGCCGCCGTCGCCGTCCCCTTCCCCGGCGGACAACAGCATGATCAATCCGATGGACTTTATCGACTCGTCGGATGACCTGCTGGTCAATCTGGACGCGTTCGATCTGTTCGGCGACCTGCCGGAGCTCCACGACTTCGAGGCCGAGCAGACCAAGGCTGAGGAGAGGGGTGGCTCCGACAACGACGTGGGATGTCATCCGGGTACAACCGTCCATATCGCAGAGTATAGTCCGGAGTGGAGCTACACCGAGGGTGGTGTCAAGGTGTTGGTGGCAGGTCCCTGGACCGGTGGAAGTAATTCGCAGTCGTACTCGGTGTTGTTCGACACTGAGCCGGTCGAGGCCTGTCTGGTGCAGCCAGGTGTGTTGCGCTGCCGTTGTCCTGCTCACGCTCCCGGAATAGCGTCTCTTCAGGTAGCCTGCTACGGCTACGTTGTCTCCGACAGCGTCGCCTTCGAGTACCGAAGAGCGCCAACGACCGAACCAAGTCCGGAAAGAGCTTTGCTGGATCGTCTGGCGGATGTCGAGTCTCGTTTGCAAGGACCTGGCCCACCATCCCCTGCAGCTCATCTGGAAGAGCGACTTGTCGCGTATTGTCAGGATGCTGTTGTCCGTCCGTGGCGAGCCGGAGCGGAACCGTTACAATCCGGCGGCACTACTCTGTTGCATTTGGCCGCCGGGTTGGGCTACTCCAGGTTAGCCTGCGCACTCCTTCACTGGAGAGCGGAAAATCCTAGTAGCGTATTAGATGCTGAAGTTGATGCTTTGAGGCAGGACAGCGCTGGTCTCACGCCGCTAGCTTGGGCATGTGCGGCGGGACACGCGGATACTGCCAGGATACTTTATAGATGGAACGCGATGGCGCTTCGTGTCCGCGATTGCCAGAACAGAATAGCGACGGAGCTGGCGGCGGAGAACGGGCACACGGCGATCGCGGAAGAATTGAATCGGCTCGAAGCGAGGCGGCAAGACGAGAGGCTATTCTTGCGGCCGGCCAGCCCTAGTCCTAGGAGGCCATCTCAAGACAGCGGTCTCGATCTGGCGTTGTGTGGCTCCCCGCTGCTGGACAACATGGAGTTGTTGCAAGAGGATGACTCGTCATTAGCCCTCAGCGAGCAGGGAATGGAGAGCGCTCCGACCCCTCAGGAGACTGTAGGGGAGGAAGACGCGAGGGTGCTGACATTGGCTGAGCAAATTATAGCTGCGCTGCCGGAAAGGATCAAGAGAGGGGAAGGTGATTCTCCGTCTTCTTCCTCGCCGCCTCCCCCGGCACCGCCCTTGTCGCCACTCGAGGATGCTCTGATGGAACAAATGCCGCTGGACTCTGGGGAGCTGTTCGACTCGTACCGCGAGTGCAGCGGTGGCGCAGCATCAGTGTCTGACGCTGACGCGGATGCAAGTCCGTCGAGTCCGTCGAGCAGCTGCTTAACACCAGACTCGCCGTCCCCGCCGCCCACCACCGCCGACTTTTGCGAGTTCCTGCAACTGCAATTGCAGCTGGACGGTAGCAACGGTCGCAACGGTCAGTACTACGGCGGGGACCGGAAGTTCGGTAACGTGATCGGGTCCGGTATCTGCGGGTCGATGACCGGTGGCGGTAACGGGTCCGGTGACGGTAGCGAGGCAGACCTGAGCAGGCTGACGTTGTCCGATTGCGAGCAAAGGGAGCTATACCACGCGGCACGCATGATCCAGAAAGCCTATAGAAATTACAAGGGACGACAGAGACAGGAGGAAGCAGAGAGACACGCCGCCGTTCTCATCCAGCAATATTATCGTCGACATAAACAGTACGCTTATTATAGACAAGCCACGAAGGCAGCTCTGGTGATACAAAGCAACTACCGTAATTATCGGTCCCGGCCCTGCTCGGCGAGCTCCAGACAGCAGGCTGTGCACCAGCAAGCCGCCCATCAGGCAGCGAGGAAGATCCAGCAGTTCATGCGACAGTCGAAAATCAAGCTGCAGAACGCCAGGGCCGCCGCAAACGGGAACGGGAGGCAGCCAGCGGCCATTTTACGGGGGGTTGCTGTCCCCCAAAGCTCGCCCTCATCTAGCCCAGGGGCCAGCCTAGTAGCCGCCAACCCAGAGGTCACTTAA
- Protein Sequence
- MMPTNKPVLSADTPQAPANKLTPPEEPRGKEIAAILISFQRHAEWQSREVKVRPRSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGVECIYGCYVHSAILPTFHRRCYWLLQNPDVVLVHYLNVPYPDGDAKLAALPPCLALPPDKKEWTRDELASQLRPMFLGGDDDPNNPHLTQHSNHPVDMIVSQLLDRQRANSTSSTTGTQLAPRRLTPDNQVTSTTGGQQSSTTASPAPRVYSRHYHTAQSQQPAPLVLSLQQIQGGGGLLILNSQPYHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSQQVEMQQVTEQQIVQQTSVEREQQIKQEIDAQESMDRTAVQTLPIGGAGTEVTDFAETLDLNQEDIQRTLSANMVPPSPSPSPADNSMINPMDFIDSSDDLLVNLDAFDLFGDLPELHDFEAEQTKAEERGGSDNDVGCHPGTTVHIAEYSPEWSYTEGGVKVLVAGPWTGGSNSQSYSVLFDTEPVEACLVQPGVLRCRCPAHAPGIASLQVACYGYVVSDSVAFEYRRAPTTEPSPERALLDRLADVESRLQGPGPPSPAAHLEERLVAYCQDAVVRPWRAGAEPLQSGGTTLLHLAAGLGYSRLACALLHWRAENPSSVLDAEVDALRQDSAGLTPLAWACAAGHADTARILYRWNAMALRVRDCQNRIATELAAENGHTAIAEELNRLEARRQDERLFLRPASPSPRRPSQDSGLDLALCGSPLLDNMELLQEDDSSLALSEQGMESAPTPQETVGEEDARVLTLAEQIIAALPERIKRGEGDSPSSSSPPPPAPPLSPLEDALMEQMPLDSGELFDSYRECSGGAASVSDADADASPSSPSSSCLTPDSPSPPPTTADFCEFLQLQLQLDGSNGRNGQYYGGDRKFGNVIGSGICGSMTGGGNGSGDGSEADLSRLTLSDCEQRELYHAARMIQKAYRNYKGRQRQEEAERHAAVLIQQYYRRHKQYAYYRQATKAALVIQSNYRNYRSRPCSASSRQQAVHQQAAHQAARKIQQFMRQSKIKLQNARAAANGNGRQPAAILRGVAVPQSSPSSSPGASLVAANPEVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00393592;
- 90% Identity
- iTF_00141220;
- 80% Identity
- -