Hrub008973.1
Basic Information
- Insect
- Halictus rubicundus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_028454235.1
- Location
- CM052171.1:3536539-3550715[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-18 6.9e-15 54.4 0.1 1 45 338 383 338 383 0.96 2 2 1.1e-18 2.1e-15 56.1 0.0 1 43 793 836 793 838 0.95
Sequence Information
- Coding Sequence
- atgaccaccggtaccaccacgattcccaccaggcgaagacgcaaacgccaaaagaacgacggagacggtgccaccgacgacagagaggacgacgaagaaaacgaggaggaggaggacgCAAGGTGTCAGAACGAAGCGGAGAAGAGGCTCAAGCTCGATCAGGATGCCGACAGGCCCGTCAGTCCTCTCAGAAGGGAAAAGGATCGAGCTGCGAGGGACTATCCGACTGCCAACGCCACCGACACGGAAGGGACCAAGGAACGAACGGAGGAAGTCGCGTTGGTGCGGACACCGGTGACGCAGGGCTTGTTGAGAGTGAAGAAGGAGGAGGAGTTACAAGAAGCACCGAGTTCTGGAGGTGGCCCAACGATATTGACGACACCGGCTCCGGATTCGGACGGGACCAGGTCAGGGTTGCCGTGTCGGGAGGTTGACACGGCGGCTAGGAACGCGGTAGCGCCGTATCTGATCGGAGGCAGGCGCACCAGCCCACCACCCGAAGACTGGAAGCCGAACGACAAGTGTTACTTTTGCCTGGACGGCAAGCTGCCGCACGATGACCAACCGCCCCTCAGCCCGCAGAGCGACAGCAGCAGCAGCTCGCGATCGGCCGAGTCACCGATGTCGGTCCAGGTGGACCCGATGGCGGCTTCAGTGGTCGCCGCGGCCCTTAGCGGCACCTACCCCACCTTGCTGCCCCAATGGTGTCTACCACCTAGGGAAGCGCCTCTGGTTGGGGTACAGGCTCACCAGGACAGCGCGACGCCAGTCGATCAGCCGCTTGACCTCTCGGCCAAACCCAAAAATTCTCAGGACAACAACATATCCCTTTTGGAGCAACAGAAAATACCTCTAAGGATGCCGGCAGGTATCGACCCCAAGAGTATCTTTAATTCGTGTTACCGCGCGAAACCGCGTATGACCGGGCCGGTGGCCGTGACGGCGGCAGCAGCTGCGGCAGGCGTCGGTGGTGTCCCCGTGGTGGGTGCCGGGGGTGGCCGGAGGGCCTACACCGAGGAGGAGCTGCAAGCCGCCCTCAGGGACATCCAGAGCGGCAAGCTCGGCACGAGAAGGGCGGCGGTCATCTACGGAATACCGCGTAGCACCCTGCGCAACAAGGTCTACAAGCTTGCGATGGAGCGCGAAAGGGACGCGTCCCTGACTAGCACCCACTCACACCCTCACGAGCCCGGCGCCCCAGCCACCACCACCACCACCATCACCACCACCACCACAACTACTACTACTACTACTACAACACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGTTTAACACACGGCCGGTCGGTCTTGGCGAGGTTGCGAGACTCGAGGTGGACGACAAGGAACTGTCCGGAGCGGAAGAGGAGAAAGAAGTCGAGAAGGCGCTGCTGAAGCCGTTGTTGTCTTTCGAAGATCTTGTCAGGTTCTCCGCCCTCGAAGGCGGCGGCGGGGACTCCCTGAGGAGTCTGCTGCAACGGGGACAGGAAATGGGAACGGAGTGGCCAGGCCTGGAACACGCGAACATCGGCCCGTACATTCAGAAGATGCTCGCGGCGGCTGCACCGTTCAAAGGCATGGAGACGCAGGACTACCGTATCCCGGAGGTGATGAGGCGGCTGATGAGCGAGGACAAGAGGCTAAACAAGAGCGTAAACGGGGACCAGTCGCAGCCGTGTCACCAGCAGTTTCATCACCAGCAGCAGTCGCATTCGCAGCACTCGTCGCACTCGCAGGCCTCGGGCGGTACGGCGTCGCAGACGCAGCAGCAACAGCAGCAACAGCAACGAGGCCCGATCACGAACGACGACTTCAACCCGAACATCGAGGAGGAGGCGAGCGACAGCGCCCAGGGCCGAGCGATTCTAAAGATTCCGTCCTACAAGCCCGCGAGCACGCCGGGCTGCTCGAGCAAGAACGGCGAGCCGACCTCCGCGGCGTTCGCGCAGGGATTCGCCACCGCTGCCTCGAGCCCGGGCCTCCTCGAGAGGGCGAGCCCGGCGTTCTCCGGCACCAGCAGCCCGACCAACTCGCTCGTGGGGAAGACGGTGGCCGTCAACTTCCGCGACGTGATCGCCAAGAGCATCAGCGTCAAGTTCCAGGAGGGCCAGCAGGTGCCGGCGGCCGCCGGACTCACCGGCTGCCAACCGAGCGGCGTCGTACAGCCCCAGCAGACGATCATGACGGACCCGAGTCCGTTCAAACGGGGCCGGTACACGCCGCCGCAGCCCGCAACGCAACAGTCCCAGTCGCAGCCCAAGCCCCAACAGTCCCAGGACGCGAACAAACCGAAACCAGCCACCGGCGGCAAGGGTACCAGACCGAAGCGCGGCAAGTACCGAAACTACGACAGGGACAGCCTGGTCGAGGCTGTCAGGGCCGTGCAGCGCGGCGAGATGAGTGTGCATCGCGCGGGCAGCTACTACGGAGTGCCACACTCCACCCTCGAGTACAAAGTCAAGGAACGACACCTCATGAGGCCAAGAAAGAGGGACCAGAAGCAGACGGACGACAAGACGAAGGAGACGGCAGTGGCGGCGGCGGCGGCGGCAGCGGCGGCCGCGAACATGCGGCCCGGCACCGCGGACAAGAAGCCGCAACTGAAGCCGCAGAAGCCGTTCACGCCGCCGGCGGGTATCGCGGGACCGAACGGGCTGAAGATGCCGCCGTTCATGGAGGGCATGCCTCACTTGCCGTTCGGGCCGTTCAACTTTTGGAACCCGACGCCGTTCATGCCGTCGCCGTTCATGGCCGGGGCGCCGAACGTACCGACGATCCTGCCGGAGCAGTACTTCGCGACGAGCAGGATGCGTGGgttgcaggaacagcagaggagcgcggcgatggtgcaacagcagcagcaacagcaacagcatcctcagagggatagggacggtatcggcgcgtcgacagcaaccacggagtcgTCGCCGGGAACCTCAAACTCCCGGAGCACGCCGATGTCGAAGGCGGCACGCGAGGCGACCGAGGGTTTGTACGACGGCTCGGCGGCGAACGGCAGTTTCCTGGACAGCCTGATCAGGTCTAGTCTGGAGACGGGAATCCCAAGGGACCAGAGGGCGATCACCGAGACGAGGGGCAACCAGTCTGCATCGTCGTCGCAGCAACAACTCCCGGAAACGATGAGGAGTAAAGCGTTGATCGATCAGCTGTGCAGAAACTCGAGGAGAACGCCGGTGCCTCGGCTGGCCCAGGACAGCAGCGAGGACGAGAGCTACAGGGGACCATCGGCGGCGGGAAGACCAGTCCCGGAAAGGCCGGAACGCGTGCCCACCGTCGACCTGAGTCCGTCACCGTCGGATAGGTGTCGCGGCGACGACGCCAGCGACCGTCTCGCCTCTCCGCCAACGCCTCTCTCGGTCTCGAGGGCCGGGAGCAGGGACGAGGACAGTGCTCGCGACTCGAGGGCCGATCGCAGCAGCAGGGAGCGCGAGGTCCacaacggcggtcaggaggatcgcgatcgaaagcctctgacgagcggcggcggccagcaacagcagtcgtcgtcgtcgtcgtcgacgtcgcagcaatcgtcgcaacagcagccgtcgtcgcagtcgcagctgaatcactacccggacttgctctacgccgtatcaactgacaaaaaaagtgcctgtgatagtaagcttatagtagatcattcgagccagaagactcagcaacaacagcagcagcaacaacaacagcagcagcagcaacagcaacctacgcaacagaaagagtttgctgcggtgagcggactggttgtgcaactgcagcggggctacaactccgggagcaacagatccggcgagcagaccaacagccagcagtcggccgagcaacGCGGTCCCGTCATCGGTATGGAAGACACCGTCGAGCAGTAG
- Protein Sequence
- MTTGTTTIPTRRRRKRQKNDGDGATDDREDDEENEEEEDARCQNEAEKRLKLDQDADRPVSPLRREKDRAARDYPTANATDTEGTKERTEEVALVRTPVTQGLLRVKKEEELQEAPSSGGGPTILTTPAPDSDGTRSGLPCREVDTAARNAVAPYLIGGRRTSPPPEDWKPNDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVQAHQDSATPVDQPLDLSAKPKNSQDNNISLLEQQKIPLRMPAGIDPKSIFNSCYRAKPRMTGPVAVTAAAAAAGVGGVPVVGAGGGRRAYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTPPNTTQNASATTPPPQVDEFNTRPVGLGEVARLEVDDKELSGAEEEKEVEKALLKPLLSFEDLVRFSALEGGGGDSLRSLLQRGQEMGTEWPGLEHANIGPYIQKMLAAAAPFKGMETQDYRIPEVMRRLMSEDKRLNKSVNGDQSQPCHQQFHHQQQSHSQHSSHSQASGGTASQTQQQQQQQQRGPITNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFATAASSPGLLERASPAFSGTSSPTNSLVGKTVAVNFRDVIAKSISVKFQEGQQVPAAAGLTGCQPSGVVQPQQTIMTDPSPFKRGRYTPPQPATQQSQSQPKPQQSQDANKPKPATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQTDDKTKETAVAAAAAAAAAANMRPGTADKKPQLKPQKPFTPPAGIAGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFMAGAPNVPTILPEQYFATSRMRGLQEQQRSAAMVQQQQQQQQHPQRDRDGIGASTATTESSPGTSNSRSTPMSKAAREATEGLYDGSAANGSFLDSLIRSSLETGIPRDQRAITETRGNQSASSSQQQLPETMRSKALIDQLCRNSRRTPVPRLAQDSSEDESYRGPSAAGRPVPERPERVPTVDLSPSPSDRCRGDDASDRLASPPTPLSVSRAGSRDEDSARDSRADRSSREREVHNGGQEDRDRKPLTSGGGQQQQSSSSSSTSQQSSQQQPSSQSQLNHYPDLLYAVSTDKKSACDSKLIVDHSSQKTQQQQQQQQQQQQQQQQPTQQKEFAAVSGLVVQLQRGYNSGSNRSGEQTNSQQSAEQRGPVIGMEDTVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00865231;
- 90% Identity
- iTF_00762467;
- 80% Identity
- -