Hrub013449.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Halictus rubicundus
Gene Symbol
ct
Assembly
GCA_028454235.1
Location
CM052174.1:8576071-8592880[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-27 4.8e-24 84.1 0.0 2 72 464 535 463 540 0.95
2 3 2.5e-32 8.5e-29 99.3 0.0 2 77 873 949 872 951 0.96
3 3 1.4e-30 4.8e-27 93.7 0.0 3 75 1105 1178 1103 1182 0.95

Sequence Information

Coding Sequence
ATGGGATTTCGTGAATGTGATTCTATATTTGTATCGACGATCAGCCAGCTGGTCGAGGAAGTGTCCAGGTTACAGCAGAGCCTGCAACGTCTTCAAGAGACCAGCGCACAGGCGACGGCGCGGCTCGAGGAGGAGCTCGAGGCGCGCAGACAACACATCAGCAGACTGGAGAGCAAACTCGAACGACAGAGGGACTATGACGACCTGAAGCGGGAGATCAACGCGCTCAGATCGGTCGATCTCTCGCAGATCCCGACCGGCGAGCCGGGCAAGAGCCTCGAGCACCTCCTAATGGAGCGCTCGAAGGCGCTTCAGCAAACAGAGATCTTGAAACCGTCGTCCAACACCCCGGACGCACTCGGTGGACTATCGTCACCCCTGCAGCGCGCCTCCACCGCCTCGCCCCACGGGGTCGGGGGTGTTCCGCCTTCGTCCCACGTGCCCTCCCAGCAACCACCACCACCGCCCCCAGCAGCAGTTTCCCTCCCGCCGCGGTCCACTCCTACACCCTCTTCAGCGACCTCGACCACGTCCAGCCTCCTGTTCCCACCCCCTCTCCAGAACGTCGAGACGTTCGGCTCTTTCCTTGgcgaggagatcgtcgccaactggaggcgGACGTTGGAgaggtccatcatgaatcaacagcagcagcagcagcagcagcaacaacaacagcaacagcaacaacagcagcagcagcagcaacaacaacaacaacagcaacaacagcagcagcaaccacagcaaaccacgcctctgaaccaactggttcagcagcagcaacaactgcaacaagctcagccgttgatcggcctccatccgccgacgagtaccagcagcatgaaccatctaccgtcgcccaCAGATCCGTCGTCCAGCTCCAACACGCCGGCCAAGTCAAACACCCCGCTAGGAACCACTCCACTGAGTTGCCTTGACGCGGCCGAGAAGGCGCCCACGCCAGTCTCCGGCCACGAAACGCCCGCGCCGCCCACGCCGTCGTCCACCACCGCGTTAACATCACCCCCGAGCTTTCAACCACCCACCACGATCATCGAGACCGCCTCCTCGGCCTCGGTCAACGGTGGCAGCGTGATCCCCGCCGTCCCGACGGCGCCGCCGCCGAAAAGCCCGGCCGACCAGGAGTCCTGTCACAACAACAACAACAGCCACCACCTGGCGAACAACAACATCGGCGGACTGAGCGTGCTGGACACCCTGAAGAGCCCGTTTCGCTTCGACGACAGGACGCACCCGTTCCGATTCGGCGACGAGTTCGGCGCCGCCGGTATGGCCGGTCGTCTAGGCGAGTCGTTGATACCGAAGGGCGACCCGATGGAGGCAAGGCTGCAGGAGATGCTCAGATACAACATGGACAAGTACGCGTCGCAGAACCTCGACACGCTCCACATAGCCAGGAGGGTCCGCGAGCTGCTGTCGATACACAACATCGGTCAAAGGCTGTTTGCCAAGTACGTCCTCGGTCTTAGCCAGGGAACGGTCAGCGAGCTGCTGAGCAAACCGAAACCCTGGGACAAACTGACGGAAAAAGGCCGCGACAGCTACCGGAAGATGCACGGCTGGGCTTGCGACGAGAACGCTGTTATGCTGTTGAAATCCCtgatacccaagaaagAGTATGTTTCAGGCAAGGAGCAGGGAATGCCAGCGTTCGCGCGCGGACCACAGGAAGGTGGTCCGCCGGAAATGAGTGACGAAAGGTTGGCGCATATCCTCTCGGAGTCTGGCCACCTACAGATGAGGGGCGAGCACGAGGTGTCTAACGACGCCGACAGCAAAAGTCCGAGTAGGATCGGTTGTCCGAGCCCGTTCAATAAGGACAGGCTCGACAGCCAGAACAGGAGACTGAAGAAATACGAGAACGATGACATTCCGCAGGAAAAGGTAGTCAGGATCTACCAGGAGGAGCTGGCCAAGATAATGGGCAGAAGGGTGGACGACCTCCGCGGGCCCCGAGAGTTCTCTTCCAGCGCGATGTTTCCGCACTTTTTCAGTGGCGGCCAGGGTGGACTTCAGGGAATGGAGCGCACGCAGGAGGACATCCGGTTGGCGTTGGACGCGTACCATCGGGAGCTGCAGAAGCTGAACCCAACGCCGGGTCAGAACCCGTCGCTGACAGGGTTGCCGGGACTTCCTGGCCTGCCGGGACTCCTGGCGCTTCAGCAACAGGCACTCCAGCAACACCACCTGGCGACGAACGGAGGCGGTGTCCAGGATTTGAGCCTGGGCAAGATCGACCCTAGGAATAAGATGATCAACGGCATCTCCGAGGAGGAGAAAGAGAAGGTGGAGGAGGCTATGAGACACGCGGGTAGCGCGTTCTCGTTGGTCAGGCCTAAGCAGGAGACCACCGCGCCGCAATCCACCCCGAGCGGATCCAGCGCGAGCTCTCCGCTCGGGAATTCCATTCTTCCACCCGCGATGACTCCCAGCGAGGAATTCTCCGGGGCGGCGGCGGCCAGTCCTCTCCAGAGGATGGCCTCTATCACGAATAGTCTGATCAGTCAACCGTCCACGCCCACCCATCACTCGGCCAACCAGAGGCCGCTGAAAGCTGTACTGCCACCCATCACCCAGCAACAGTTCGACATGTACAATAACCTTAACACCGAGGACATCGTCAAGAGAGTGAAGGAACAACTGTCCCAGTATTCGATTTCCCAGCGTCTGTTCGGCGAGTCGGTGCTGGGCCTGTCCCAGGGATCCGTCTCCGATCTGCTAGCACGGCCGAAGCCCTGGCACATGCTCACGCAGAAAGGTCGCGAGCCGTTCATCCGGATGAAGATGTTCCTCGAGGATGACAACGCCGTGCACAAGTTGGTGGCCAGCCAGTACAAGATCGCCCCGGAGAAACTGATGAGGACCGGCGGCTACGGTGGCCTGCCTCGTAAGTTTAACTCAGCTTGTGGGACCCCGATGAAGCCTATGCCTCCCACGAAGCTGGTCCAGGAGCAGCTTCAGAACGCAGCGAAGGCGCAAGCGGCGGCACAGGCTGCAGCCCAGGCGGCGGCGCAGCACCAGCAGGAAAGCCAGATGCAGTTGGGACCTCCTCAACCGAGTCCTCAGCATCCTCAGCACCCGCAGCCACCACCTCCGATGATGCTAACCCCTCCGGGTCCTCATCTTCCTCACACGCAGCTGAGCATGCAGGAGCTGCAGAAGAAACAGCAGCAGCAACAGCAACAGCAGATGAACCTCCACTCGCCGCATCATCAAATGACCCCGTCGCCCCTTCGCGGCCTCCACCCGCACATCTCGCCGAGCGTATACGAGATGGCGGCGTTGACGCAGGATCTGGACACGCAGACCATCACGACGAAGATCAAGGAGGCGCTGCTGGCGAACAACATCGGCCAGAAGATTTTCGGCGAGGCTGTTCTCGGTCTCTCGCAAGGATCGGTGAGCGAGTTGCTGAGCAAACCGAAGCCCTGGCACATGCTCAGCATAAAGGGCCGGGAGCCGTTCATCAGGATGCAGCTGTGGCTGTCGGACGCGCACAACGTTGACCGGCTACAAGCGCTGAAGAACGAGCGGAGGGAAGCGAACAAAAGACGACGGAGCAGCGGTCCGGGTCACGACAACAGCTCGGACACGTCCAGCAACGACACGGCCGAGTTCTACCACGCCGCCTCGCCCGGTCCTGGTCCAGCGTCGGCCAAGAAGCAACGTGTCCTGTTCTCGGAGGAGCAGAAGGAGGCCCTGAGGCTCGCATTCGCCCTGGACCCGTACCCCAACGTGGCGACCATTGAGTTTCTAGCCAGCGAGCTGGCGCTGTCCTCGAGGACGATAACCAACTGGTTTCACAATCACCGGATGAGACTGAAACAGCAGACGCCGCACGGCCAGCCGGAGCCGCAGTCTCCCAGAGAACCCGGCCAGCCGTTCGACCCCGTTCAGTTCCGACTGCTGTTGAACCAAAGACTACTGGAGATCCAGAAGGAGAGACTGGGCCTGGGCAACGTGCCTCTGCCCTACTCCCCGTACTTCAACCCTAACCTGGCCGCCCTCGTCGGGAACGCGTTGAAGGAACAGTGCTCCGGCCTGGACCTGTCGATGAACGCGCTCAAGAGGGAGCCGAACCAGGAGTTCGAGGACGAGGACGTCGAGGACGCCATGAGCAACCTCGGCAGCGAGGACTCCGAGGGCTCCGCGGGTAGTATAAAGAGAGAGCCGACGGAGACACCTTCCGCCCCCACCACCGTCAGATCGAATAGAAGAAAACCTGCCGCGCCGCAATGGGTGAATCCTGAATGGCAGGAACCGCCCAGGACGGGGGACGAGGTGATCATCAACGGTGTCTGCGTGATGCAGACGGACGATTACGGGGTCAAGAGGGAGGCCGAGGAGACGATCAGGGTCGAGCCGACGCCGGTTCAGGACAGATACGAGGAGGACGCGCAGAGCGACGTCTCCTCCGTCTCTGGGAACAACGGCCAGGACAGGGATAGTCCTCTACCTAGTCCGAAGTCCGCACAGAACAGTCCGGCGACGTCGCCCAGACCGCCCTCCACGCAGCAAACGCAACAGTCCACGGAGGAGAGTCCCAAGGACAACGTGGTGAAACACGAGCCGGAAGAGACGTGGGACTATTAA
Protein Sequence
MGFRECDSIFVSTISQLVEEVSRLQQSLQRLQETSAQATARLEEELEARRQHISRLESKLERQRDYDDLKREINALRSVDLSQIPTGEPGKSLEHLLMERSKALQQTEILKPSSNTPDALGGLSSPLQRASTASPHGVGGVPPSSHVPSQQPPPPPPAAVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMNQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQTTPLNQLVQQQQQLQQAQPLIGLHPPTSTSSMNHLPSPTDPSSSSNTPAKSNTPLGTTPLSCLDAAEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTTIIETASSASVNGGSVIPAVPTAPPPKSPADQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPAFARGPQEGGPPEMSDERLAHILSESGHLQMRGEHEVSNDADSKSPSRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKIMGRRVDDLRGPREFSSSAMFPHFFSGGQGGLQGMERTQEDIRLALDAYHRELQKLNPTPGQNPSLTGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLGKIDPRNKMINGISEEEKEKVEEAMRHAGSAFSLVRPKQETTAPQSTPSGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQESQMQLGPPQPSPQHPQHPQPPPPMMLTPPGPHLPHTQLSMQELQKKQQQQQQQQMNLHSPHHQMTPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPTETPSAPTTVRSNRRKPAAPQWVNPEWQEPPRTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGQDRDSPLPSPKSAQNSPATSPRPPSTQQTQQSTEESPKDNVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_00982081;
80% Identity
iTF_00763124;