Hrub008384.2
Basic Information
- Insect
- Halictus rubicundus
- Gene Symbol
- kn
- Assembly
- GCA_028454235.1
- Location
- CM052173.1:2522676-2531968[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-124 4.7e-120 401.5 8.5 205 564 1 354 1 365 0.86
Sequence Information
- Coding Sequence
- ATGAGGCGCTTCCAGGTGGTCATTTCCACGCAAGTAGGAGTAGAGGGACCACTACTGGCAGTCTCGGACAACATGTTCGTCCACAACAACAGCAAACATGGGCGCAGAGCGAAACGATTGGATCCCAGCGATCCCGGCGAGTACAACAGCCTCTACACTCCGGTTCCCCTTCAAACGCCATGCATAAAGGCAATATCACCGAACGAGGGCTGGACGTCCGGAGGATCGACAGTGATAATCATAGGCGAAAATTTCTTCGATGGACTTCAAGTAGTGTTCGGGTCGATGCTGGTCTGGAGCGAGCTGATCACACCTAACGCAATAAGGGTGCAAACTCCACCGAGGCAGATACCGGGCGTCGTCGAGGTCACACTGTCGTATAAGACTAAACAATTCTGCAAGGGGGCGCCTGGGAGATTTGTTTATGTGTCACTGAACGAGCCGACGATCGACTACGGCTTCCAAAGGTTACAAAAGCTGATTCCACGACACCCGGGCGACCCCGAGAAATTACCGAAGGAGATTATACTGAAGAGGGCGGCGGACCTCGCGGAAGCTTTGTACAGTATGCCCAGAAGCGGAAACGCGGGAATTACAGGTGCTCCCAGGAGTCCTGGTTCTGGCCACCCACCTGCGCCCCCCACATCCAGTTCGGCGACGGCGTTCAACTCGTACACAGGACAACTGGCAGTGACAGTGCAAGAAAACGGTAGTGCGGCGAAATGGACGGACGACGGTAGTTCCGTGACGACAGGAGCCAATGCTGGAGGCGGTGGTGGCGGAGGCGGTGGTGGCAGCGTCGGTGGGAACGTCGACGCCTATAGGCAAAGCAGTAGCGCGAGTCCACGCGGGGTTGTAACTGGAGGCGGTTATTGCGGAAGTTCGGCCAGCACACCCCACAGTCACAGCACCAATGGCAGTTACTCGGTTGCCAATCCCTACGCGGGCAGTCCGACACTTTACACCTCGCCGCACGAACAGTATGGCATTTTCTATACGTCTGGGGACGGGAGTGCGTTCGCCCCTGTAGTACGACCACCGACTACCTCAGTCCCACCGCACTGGTCCACACAGCACCACCTCGCCACAGCCGCCCAGTAA
- Protein Sequence
- MRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPGEYNSLYTPVPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSELITPNAIRVQTPPRQIPGVVEVTLSYKTKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSGNAGITGAPRSPGSGHPPAPPTSSSATAFNSYTGQLAVTVQENGSAAKWTDDGSSVTTGANAGGGGGGGGGGSVGGNVDAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYAGSPTLYTSPHEQYGIFYTSGDGSAFAPVVRPPTTSVPPHWSTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01489186;
- 90% Identity
- iTF_00360699;
- 80% Identity
- iTF_00762985;